mRNA_M-pyrifera_M_contig104987.1075.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104987.1075.1 vs. uniprot
Match: A0A7S0WNL5_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WNL5_9CHLO) HSP 1 Score: 109 bits (272), Expect = 3.090e-26 Identity = 60/105 (57.14%), Postives = 72/105 (68.57%), Query Frame = 1 Query: 7 GLVVSQPALEL--PRVTAPDVKATTELHLAGKKIEKLWGFAPFVNLEVLWVNRNRLRELDNLDSNFRISRLYAQDNRIDTLAGSLLRFKFLRVLNLANNSLADLD 315 G V+SQP EL VK EL+L GK IEK+ GF PFVNLE LW+N N+L++++NLD NFRI LYAQDN+I TL GSL F FL L+L+NN L DLD Sbjct: 6 GPVISQPGKELVGEGKNMKYVKECKELYLGGKGIEKIRGFEPFVNLECLWLNSNKLKKINNLDQNFRIKALYAQDNQICTLKGSLECFHFLETLDLSNNQLRDLD 110
BLAST of mRNA_M-pyrifera_M_contig104987.1075.1 vs. uniprot
Match: D8TIT4_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TIT4_VOLCA) HSP 1 Score: 107 bits (266), Expect = 9.230e-26 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 7 GLVVSQPALELPR--VTAPDVKATTELHLAGKKIEKLWGFAPFVNLEVLWVNRNRLRELDNLDSNFRISRLYAQDNRIDTLAGSLLRFKFLRVLNLANNSLADLD 315 +VVS+P EL A +K TE++L GK IEK+ GF PFVNLE LW+N N+L++L+NLD+ R+ LYA DN+I TL GSL+ FKFL +L+L+NN L DL+ Sbjct: 2 AVVVSEPLRELVGGGENAKYIKECTEMYLCGKGIEKIRGFEPFVNLESLWINGNKLKKLNNLDNQKRLKALYAHDNQICTLKGSLIDFKFLEILDLSNNQLRDLE 106
BLAST of mRNA_M-pyrifera_M_contig104987.1075.1 vs. uniprot
Match: A0A8J4FSV9_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4FSV9_9CHLO) HSP 1 Score: 105 bits (263), Expect = 8.930e-25 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 7 GLVVSQPALELPR--VTAPDVKATTELHLAGKKIEKLWGFAPFVNLEVLWVNRNRLRELDNLDSNFRISRLYAQDNRIDTLAGSLLRFKFLRVLNLANNSLADLD 315 +VVS+P EL A +K TE++L GK IEK+ GF PFVNLE LW+N N+L++L+NLD+ R+ LYA DN+I TL GSL+ FKFL +L+L+NN L DL+ Sbjct: 2 AVVVSEPLRELVGGGENAKYIKECTEMYLCGKGIEKIRGFEPFVNLESLWINGNKLKKLNNLDNQKRLKSLYAHDNQICTLKGSLIIFKFLEMLDLSNNQLRDLE 106
BLAST of mRNA_M-pyrifera_M_contig104987.1075.1 vs. uniprot
Match: A0A7S0V0N4_9CHLO (Hypothetical protein (Fragment) n=2 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0V0N4_9CHLO) HSP 1 Score: 105 bits (261), Expect = 1.360e-24 Identity = 56/103 (54.37%), Postives = 75/103 (72.82%), Query Frame = 1 Query: 13 VVSQPALELPR--VTAPDVKATTELHLAGKKIEKLWGFAPFVNLEVLWVNRNRLRELDNLDSNFRISRLYAQDNRIDTLAGSLLRFKFLRVLNLANNSLADLD 315 ++S+P LEL VK TE++L+ KKIEK+ GF FVNL+VLW+N N LR+++NLD+NFR+ LYAQDN I TL GSL FKF+ L+L+NN+L +LD Sbjct: 3 IISEPRLELVGGGQNIKYVKECTEVYLSNKKIEKIRGFEDFVNLQVLWINGNCLRKINNLDNNFRLRGLYAQDNNICTLKGSLSCFKFMEELDLSNNTLRNLD 105
BLAST of mRNA_M-pyrifera_M_contig104987.1075.1 vs. uniprot
Match: A0A150G7G9_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G7G9_GONPE) HSP 1 Score: 103 bits (257), Expect = 1.740e-24 Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 7 GLVVSQPALELPR--VTAPDVKATTELHLAGKKIEKLWGFAPFVNLEVLWVNRNRLRELDNLDSNFRISRLYAQDNRIDTLAGSLLRFKFLRVLNLANNSLADLD 315 +VVS+P E+ A +K TEL+L K IEKL GF PF+NLE LW+N N+L++L+NL+ N R+ LYAQDN+I TL GSL FKFL L+L+NN L DLD Sbjct: 3 AVVVSEPCKEIVGGGSNAKYIKECTELYLGNKGIEKLRGFEPFLNLESLWLNGNKLKKLNNLECNKRLKALYAQDNQICTLKGSLQCFKFLETLDLSNNLLRDLD 107
BLAST of mRNA_M-pyrifera_M_contig104987.1075.1 vs. uniprot
Match: A8HWC6_CHLRE (Flagellar associated protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HWC6_CHLRE) HSP 1 Score: 103 bits (258), Expect = 6.750e-24 Identity = 59/103 (57.28%), Postives = 71/103 (68.93%), Query Frame = 1 Query: 13 VVSQPALELPR--VTAPDVKATTELHLAGKKIEKLWGFAPFVNLEVLWVNRNRLRELDNLDSNFRISRLYAQDNRIDTLAGSLLRFKFLRVLNLANNSLADLD 315 VVS+P EL A +K TELHL K IEKL GF FVNLE LW+N N+L++L+NLD+ R+ LYAQDN+I TL GSL FKFL L+L+NN L DLD Sbjct: 4 VVSEPHKELVGGGENAIYIKECTELHLGSKGIEKLRGFEVFVNLESLWLNGNKLKKLNNLDAQTRLKALYAQDNQICTLKGSLEHFKFLETLDLSNNQLRDLD 106
BLAST of mRNA_M-pyrifera_M_contig104987.1075.1 vs. uniprot
Match: A0A835T1H7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T1H7_9CHLO) HSP 1 Score: 101 bits (252), Expect = 2.620e-23 Identity = 57/103 (55.34%), Postives = 70/103 (67.96%), Query Frame = 1 Query: 13 VVSQPALELPR--VTAPDVKATTELHLAGKKIEKLWGFAPFVNLEVLWVNRNRLRELDNLDSNFRISRLYAQDNRIDTLAGSLLRFKFLRVLNLANNSLADLD 315 V+S+P EL A +K ELHL K IEKL GF FVNLE LW+N N+L++L+NLD+ R+ LYAQDN+I TL GSL FKFL L+L+NN L DLD Sbjct: 4 VISEPHKELVGGGQNAKYIKECIELHLGSKGIEKLRGFEVFVNLESLWLNDNKLKKLNNLDAQKRLKALYAQDNQICTLKGSLENFKFLETLDLSNNQLRDLD 106
BLAST of mRNA_M-pyrifera_M_contig104987.1075.1 vs. uniprot
Match: A0A067CBD5_SAPPC (Uncharacterized protein (Fragment) n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBD5_SAPPC) HSP 1 Score: 94.7 bits (234), Expect = 1.220e-20 Identity = 53/104 (50.96%), Postives = 68/104 (65.38%), Query Frame = 1 Query: 1 LEGLVVSQPALELPRVTAPDVKATTELHLAGKKIEKLWGFAPFVNLEVLWVNRNRLRELDNLDSNFRISRLYAQDNRIDTLAGSLLRFKFLRVLNLANNSLADL 312 ++ + VS+P EL VK TEL LA ++I+ L F PFV+LEVLW+N N + +L LD+ FRI L+AQ+NRI T+ GSLL F FLR L L NN L DL Sbjct: 4 IDEMRVSEPHKELAVANEKYVKNCTELVLAHREIDVLGNFEPFVSLEVLWINDNNIEKLTGLDTCFRIKYLFAQNNRISTVDGSLLHFTFLRELRLFNNRLQDL 107
BLAST of mRNA_M-pyrifera_M_contig104987.1075.1 vs. uniprot
Match: A0A1V9YXD5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YXD5_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 5.410e-20 Identity = 54/99 (54.55%), Postives = 64/99 (64.65%), Query Frame = 1 Query: 16 VSQPALELPRVTAPDVKATTELHLAGKKIEKLWGFAPFVNLEVLWVNRNRLRELDNLDSNFRISRLYAQDNRIDTLAGSLLRFKFLRVLNLANNSLADL 312 VS+P EL VK TEL +A + I+ L F PFV+LEVLWVN N + +L LD+ FRI LYAQ+NRI T+ GSLL F FLR L L NN L DL Sbjct: 3 VSEPHKELAVCNEKYVKNCTELVMAHRGIDVLGNFEPFVSLEVLWVNDNNIEKLTGLDTCFRIKYLYAQNNRIATVEGSLLHFTFLRELRLFNNRLQDL 101
BLAST of mRNA_M-pyrifera_M_contig104987.1075.1 vs. uniprot
Match: A0A5B8MVZ2_9CHLO (Uncharacterized protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MVZ2_9CHLO) HSP 1 Score: 91.3 bits (225), Expect = 5.820e-20 Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 61 VKATTELHLAGKKIEKLWGFAPFVNLEVLWVNRNRLRELDNLDSNFRISRLYAQDNRIDTLAGSLLRFKFLRVLNLANNSLADL 312 V+ TELHLA + IE++ GF NLEVLW+N N+L + NLD+NFRI LY N I +L GS+ +F FL++LNL NN L+DL Sbjct: 24 VRECTELHLANQGIEEIHGFERLSNLEVLWLNNNKLVSVTNLDANFRIKELYLHSNMITSLQGSIRKFHFLQILNLENNCLSDL 107 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104987.1075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104987.1075.1 >prot_M-pyrifera_M_contig104987.1075.1 ID=prot_M-pyrifera_M_contig104987.1075.1|Name=mRNA_M-pyrifera_M_contig104987.1075.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp LEGLVVSQPALELPRVTAPDVKATTELHLAGKKIEKLWGFAPFVNLEVLWback to top mRNA from alignment at M-pyrifera_M_contig104987:3..317- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104987.1075.1 ID=mRNA_M-pyrifera_M_contig104987.1075.1|Name=mRNA_M-pyrifera_M_contig104987.1075.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=315bp|location=Sequence derived from alignment at M-pyrifera_M_contig104987:3..317- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104987:3..317- >mRNA_M-pyrifera_M_contig104987.1075.1 ID=mRNA_M-pyrifera_M_contig104987.1075.1|Name=mRNA_M-pyrifera_M_contig104987.1075.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig104987:3..317- (Macrocystis pyrifera P11B4 male)back to top |