mRNA_M-pyrifera_M_contig104979.1070.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104979.1070.1 vs. uniprot
Match: A0A5D6XXW0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXW0_9STRA) HSP 1 Score: 109 bits (272), Expect = 5.370e-26 Identity = 67/173 (38.73%), Postives = 86/173 (49.71%), Query Frame = 1 Query: 16 FMRSVYLCNKLVVAAVNGHAVGAGVTVLPHCDLVVVVEGGKLWTPFVALGIVPELSSSTTFPSILGSARGKAALLAGRKLSSEELYHCGFASHILPPTTSFLSNVLH----LAASTAYATRDAPAAIKDAKVL------IRSPHTLETAYKEYKILAKRVNEGMAMAAAMETI 504 FM ++ C KL+VAAVNG A+G GVT+L HCD+V + K WTPF+ +GIVPE +SS TFP+ILG LL +++ E CG S + P FL V L A P A K + +R P E EY L +R G AAA +TI Sbjct: 99 FMHTMLRCRKLIVAAVNGRAIGIGVTLLMHCDIVFAADSAKFWTPFMRIGIVPEFASSYTFPTILGPMVANDLLLRSKEIGIERAVACGLVSEVFPAGPGFLQRVFDEIEPLVAE--------PVAAKTLSLFKSVIRRVREPLVREALVAEYVELDRRFLSGETYAAASKTI 263
BLAST of mRNA_M-pyrifera_M_contig104979.1070.1 vs. uniprot
Match: UPI0019A0DAFB (Enoyl-CoA hydratase n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=UPI0019A0DAFB) HSP 1 Score: 105 bits (261), Expect = 1.590e-24 Identity = 69/176 (39.20%), Postives = 95/176 (53.98%), Query Frame = 1 Query: 1 APPNVFMRSVYLCNKLVVAAVNGHAVGAGVTVLPHCDLVVVVEGGKLWTPFVALGIVPELSSSTTFPSILGSARGKAALLAGRKLSSEELYHCGFASHILPPTTSFLSNVLHLAASTAYATRDAP-AAIKDAKVLIRSPH---TLETAYKEYKILAKRVNEGMAMAAAMETIQRRK 516 +P FMR++ C+K VVAAV G A+G G T+L HCD V V + +L PFVALG+VPE +SS P ++G R LL G + E+ CG AS +LP S V++ A A P A+++AK L+R+P TL+T E + R+ AM A Q+RK Sbjct: 84 SPVFQFMRALIDCDKPVVAAVTGAAIGIGTTMLLHCDFVYVSDEARLAMPFVALGLVPEFASSLLLPQLMGQRRAAEKLLLGDPFTPEQAVDCGIASAVLPA-----SEVVNHARRIAERFNSLPPGAVREAKQLLRAPQREATLQTIRSEGALFTSRLRSPEAMEAFQAFFQKRK 254
BLAST of mRNA_M-pyrifera_M_contig104979.1070.1 vs. uniprot
Match: UPI001F538583 (enoyl-CoA hydratase-related protein n=2 Tax=Calidifontimicrobium TaxID=2828371 RepID=UPI001F538583) HSP 1 Score: 103 bits (257), Expect = 6.060e-24 Identity = 67/170 (39.41%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 16 FMRSVYLCNKLVVAAVNGHAVGAGVTVLPHCDLVVVVEGGKLWTPFVALGIVPELSSSTTFPSILGSARGKAALLAGRKLSSEELYHCGFASHILPPTTSFLSNVLHLAASTAYATRDAP-AAIKDAKVLIRSPH---TLETAYKEYKILAKRVNEGMAMAAAMETIQRR 513 FMR++ C+K VVAAV G AVG G T+L HCD V V + +L PFV LG+VPE +SS P ++G R LL G +EE CG A+ +LPP + VL A A P A++DAK L+R+P ++ E +I +R+ AM A Q+R Sbjct: 88 FMRALLECDKPVVAAVTGAAVGIGTTMLLHCDFVYVADDARLAMPFVGLGLVPEYASSLLVPQLMGPRRAAEKLLLGDPFGAEEAVACGIANAVLPP-----AEVLPHARRVAERFNALPPGAVRDAKALMRAPQREQVMQAIAAEAEIFTRRLRSPEAMEAFQAFFQKR 252
BLAST of mRNA_M-pyrifera_M_contig104979.1070.1 vs. uniprot
Match: A0A7C9PJN2_9BURK (Enoyl-CoA hydratase n=1 Tax=Ideonella livida TaxID=2707176 RepID=A0A7C9PJN2_9BURK) HSP 1 Score: 101 bits (252), Expect = 2.990e-23 Identity = 65/175 (37.14%), Postives = 93/175 (53.14%), Query Frame = 1 Query: 1 APPNVFMRSVYLCNKLVVAAVNGHAVGAGVTVLPHCDLVVVVEGGKLWTPFVALGIVPELSSSTTFPSILGSARGKAALLAGRKLSSEELYHCGFASHILPPTTSFLSNVLHLAASTAYATRDAPAAIKDAKVLIRSPHT---LETAYKEYKILAKRVNEGMAMAAAMETIQRRK 516 +P FM+++ C+K VVAAV G AVG G T+L HCD V V + +L PFV LG+VPE SS P ++G +G LL G + +E CG A+ +LP V H + PAA+++AK L+R+PH L T E ++ ++R+ A A Q+RK Sbjct: 77 SPVLQFMKALMDCDKPVVAAVTGAAVGIGTTLLLHCDFVYVSDEARLAMPFVGLGLVPEFGSSLLVPQLMGLRKGAEKLLLGDPFTPDEAVECGIANAVLPAGEV----VAHARRVAERFNQLPPAAVREAKRLMRAPHKEQLLHTILTESQLFSERLRSPEATEAFQAFFQKRK 247
BLAST of mRNA_M-pyrifera_M_contig104979.1070.1 vs. uniprot
Match: A0A0N1L0Y5_9PROT (Enoyl-CoA hydratase n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A0N1L0Y5_9PROT) HSP 1 Score: 101 bits (252), Expect = 3.370e-23 Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 1 Query: 1 APPNVFMRSVYLCNKLVVAAVNGHAVGAGVTVLPHCDLVVVVEGGKLWTPFVALGIVPELSSSTTFPSILGSARGKAALLAGRKLSSEELYHCGFASHILPPTTSFLSNVLHLAASTAYATRDAPAAIKDAKVLIRSPH---TLETAYKEYKILAKRVNEGMAMAAAMETIQRR 513 +P FMR++ C+K VVAAV G A+G G T+L HCD V V + +L PFV LG+VPE +SS P ++G+ R LL G + E+ CG A+ +LP V H P A+++AK L+R+P L+T E ++ AKR+ AM A Q+R Sbjct: 84 SPVFKFMRALLDCDKPVVAAVTGAAIGIGTTLLLHCDFVYVSDEARLAMPFVGLGLVPEFASSLVVPQLMGNRRAAEKLLLGDPFTPEQAVECGIANAVLPAQEV----VNHARRVAERFNALPPGAVREAKQLMRAPQRELVLQTIRTEGELFAKRLRSPEAMEAFQAFFQKR 253
BLAST of mRNA_M-pyrifera_M_contig104979.1070.1 vs. uniprot
Match: A0A835ZBJ2_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBJ2_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 7.210e-23 Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 19 MRSVYLCNKLVVAAVNGHAVGAGVTVLPHCDLVVVVEGGKLWTPFVALGIVPELSSSTTFPSILGSARGKAALLAGRKLSSEELYHCGFASHILPPTTSFLSNV 330 M++V KL+VAAVNG AVG GVT+LPHCDLVV + WTPF L IVPEL SS TFP ++G ++ L+ G+KLS++E S I P + FL V Sbjct: 1 MKAVVHFRKLLVAAVNGPAVGIGVTMLPHCDLVVCAQKATFWTPFGRLAIVPELCSSVTFPELMGYSKATEMLVLGQKLSAKEALQAKLVSRIYP-SEGFLEQV 103
BLAST of mRNA_M-pyrifera_M_contig104979.1070.1 vs. uniprot
Match: D0N4V4_PHYIT (Enoyl-CoA hydratase/isomerase family, putative n=12 Tax=Phytophthora TaxID=4783 RepID=D0N4V4_PHYIT) HSP 1 Score: 100 bits (248), Expect = 1.550e-22 Identity = 59/169 (34.91%), Postives = 89/169 (52.66%), Query Frame = 1 Query: 1 APPNVFMRSVYLCNKLVVAAVNGHAVGAGVTVLPHCDLVVVVEGGKLWTPFVALGIVPELSSSTTFPSILGSARGKAALLAGRKLSSEELYHCGFASHILPPTTSFLSNVLHLAASTAYATRDAPAAIKDAKVLIR---SPHTLETAYKEYKILAKRVNEGMAMAAAME 498 +P + FM + CNKL++AAVNG A+G GVT+L HCDLV + WTPF+ +G+VPE +SS TFP +LG ++ + +++E + P TT FL VL + R ++ K L+R +P E + E++ L +R G +A ME Sbjct: 91 SPSHTFMHKMLDCNKLLIAAVNGPAIGIGVTLLMHCDLVYAADSATFWTPFLRIGVVPEFASSYTFPHLLGPIVANNLVIRSKVYTAQEALSTNIVGEVFP-TTGFLEKVL-AELTPLVNNRFNKTSLPVYKTLLRRERAPKIREALFYEFEQLDRRAASGEFLATVME 257
BLAST of mRNA_M-pyrifera_M_contig104979.1070.1 vs. uniprot
Match: UPI0013D6EB51 (enoyl-CoA hydratase-related protein n=1 Tax=Pseudooceanicola aestuarii TaxID=2697319 RepID=UPI0013D6EB51) HSP 1 Score: 99.8 bits (247), Expect = 1.560e-22 Identity = 57/131 (43.51%), Postives = 77/131 (58.78%), Query Frame = 1 Query: 16 FMRSVYLCNKLVVAAVNGHAVGAGVTVLPHCDLVVVVEGGKLWTPFVALGIVPELSSSTTFPSILGSARGKAALLAGRKLSSEELYHCGFASHILPPTTSFLSNVLHLAASTAYATRDAPAAIKDAKVLIR 408 F+ ++ C K V+AAVNG A+G GVT+L HCDLVV+ E TPFV LG+VPE SS P+++G A LLA R L++ E + G AS ++P + LAA A AP A+++ K LIR Sbjct: 84 FLTALSTCPKPVIAAVNGPAIGVGVTMLLHCDLVVIAEEATFSTPFVGLGLVPEAGSSLLLPALIGMALANDMLLANRVLTAAEAHAAGLASRLVPGA-ELTAETARLAAGVA---ASAPTAMRETKALIR 210
BLAST of mRNA_M-pyrifera_M_contig104979.1070.1 vs. uniprot
Match: A0A7S2UUF7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUF7_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.590e-22 Identity = 51/107 (47.66%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 1 APPNVFMRSVYLCNKLVVAAVNGHAVGAGVTVLPHCDLVVVVEGGKLWTPFVALGIVPELSSSTTFPSILGSARGKAALLAGRKLSSEELYHCGFASHILPPTTSFL 321 +P F ++ C KLVVAAVNG AVG G T+L HCDLV + LW PF L +VPE SS FP I+G R L G KL ++E CGF + ILP T++ L Sbjct: 112 SPAGRFKLAIMRCPKLVVAAVNGPAVGIGATLLAHCDLVFMSSEAYLWAPFFQLALVPEHCSSLLFPLIMGQGRAGRVLYLGEKLGAQEALDCGFITKILPSTSNIL 218
BLAST of mRNA_M-pyrifera_M_contig104979.1070.1 vs. uniprot
Match: A0A840S1L2_9BURK (Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Inhella inkyongensis TaxID=392593 RepID=A0A840S1L2_9BURK) HSP 1 Score: 99.8 bits (247), Expect = 1.630e-22 Identity = 64/174 (36.78%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 1 APPNVFMRSVYLCNKLVVAAVNGHAVGAGVTVLPHCDLVVVVEGGKLWTPFVALGIVPELSSSTTFPSILGSARGKAALLAGRKLSSEELYHCGFASHILPPTTSFLSNVLHLAASTAYATRDAPAAIKDAKVLIRSPHTLE---TAYKEYKILAKRVNEGMAMAAAMETIQRR 513 AP FM+++ C K V+AAVNG A+G G T+L HCDLV V + +L PFVALG+VPE SS P ++G AR LL G ++ E G A+ +LP H APAA++ +K L+R+P E +E ++ +R+ AM A Q+R Sbjct: 77 APVFQFMQALLACEKPVIAAVNGAAIGIGTTMLLHCDLVYVADDARLAMPFVALGLVPEFGSSLVVPKLMGHARAAEKLLLGDPMTGAEALEFGIANAVLPAAEV----AAHARRMAERFNGLAPAAVRASKKLMRAPGLAELQRVIQEEAELFGQRLRSPEAMEAFQAFFQKR 246 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104979.1070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104979.1070.1 >prot_M-pyrifera_M_contig104979.1070.1 ID=prot_M-pyrifera_M_contig104979.1070.1|Name=mRNA_M-pyrifera_M_contig104979.1070.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp MRSVYLCNKLVVAAVNGHAVGAGVTVLPHCDLVVVVEGGKLWTPFVALGIback to top mRNA from alignment at M-pyrifera_M_contig104979:113..628- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104979.1070.1 ID=mRNA_M-pyrifera_M_contig104979.1070.1|Name=mRNA_M-pyrifera_M_contig104979.1070.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig104979:113..628- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104979:113..628- >mRNA_M-pyrifera_M_contig104979.1070.1 ID=mRNA_M-pyrifera_M_contig104979.1070.1|Name=mRNA_M-pyrifera_M_contig104979.1070.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig104979:113..628- (Macrocystis pyrifera P11B4 male)back to top |