mRNA_M-pyrifera_M_contig104973.1068.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104973.1068.1 vs. uniprot
Match: A0A2D9JG19_9BACT (SHD1 domain-containing protein n=2 Tax=Rhodopirellula TaxID=265488 RepID=A0A2D9JG19_9BACT) HSP 1 Score: 414 bits (1064), Expect = 2.390e-140 Identity = 201/210 (95.71%), Postives = 206/210 (98.10%), Query Frame = 1 Query: 1 VSGTAMQPIAILGNGSTVVMIGMGKDRTTTNEDLQSWDIRDGKVQRGDTWKPYAGQSNAGIRFATAGPDNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPYWHTNADLSQLAIASTTQLVMVDLLEGKVTGSQSLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDLLENEWIQDTDVSGVGTSNGAIFCDDDYVLIDGSTLVDWKSG 630 VSGTAMQPIAILG+GSTVVMIGMGKDRTTTNEDLQSWDIRDGKVQRGD WKPYAGQSN GIRFATAGPDNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPYWHTNA+LSQLAIAS TQLVMVDLLEGKVTGSQSLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDL +NEWIQDT++SGVGTSNGAIFCDDDYVLIDGSTLVDWKSG Sbjct: 199 VSGTAMQPIAILGDGSTVVMIGMGKDRTTTNEDLQSWDIRDGKVQRGDIWKPYAGQSNPGIRFATAGPDNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPYWHTNANLSQLAIASATQLVMVDLLEGKVTGSQSLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDLRKNEWIQDTEISGVGTSNGAIFCDDDYVLIDGSTLVDWKSG 408
BLAST of mRNA_M-pyrifera_M_contig104973.1068.1 vs. uniprot
Match: A0A2G1WAX2_9BACT (SHD1 domain-containing protein n=2 Tax=Rhodopirellula TaxID=265488 RepID=A0A2G1WAX2_9BACT) HSP 1 Score: 410 bits (1053), Expect = 9.720e-139 Identity = 199/210 (94.76%), Postives = 204/210 (97.14%), Query Frame = 1 Query: 1 VSGTAMQPIAILGNGSTVVMIGMGKDRTTTNEDLQSWDIRDGKVQRGDTWKPYAGQSNAGIRFATAGPDNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPYWHTNADLSQLAIASTTQLVMVDLLEGKVTGSQSLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDLLENEWIQDTDVSGVGTSNGAIFCDDDYVLIDGSTLVDWKSG 630 VSGTAMQP AILG+GSTVVMIGMGKDRTTTNEDLQSWDIRDGKVQRGD WKPYAGQSN GIRFATAGPDNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPYWHTNA+LSQLAIAS TQLVMVDLLEGKVTGSQSLSDLGRIYYPK+SFNPSEDKLYLSSIGRVLILDL NEWIQDT++SGVGTSNGAIFCDDDYVLIDGSTLVDWKSG Sbjct: 196 VSGTAMQPNAILGDGSTVVMIGMGKDRTTTNEDLQSWDIRDGKVQRGDIWKPYAGQSNPGIRFATAGPDNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPYWHTNANLSQLAIASATQLVMVDLLEGKVTGSQSLSDLGRIYYPKVSFNPSEDKLYLSSIGRVLILDLRRNEWIQDTEISGVGTSNGAIFCDDDYVLIDGSTLVDWKSG 405
BLAST of mRNA_M-pyrifera_M_contig104973.1068.1 vs. uniprot
Match: Q7ULB7_RHOBA (Similar to cytoskeleton assembly control protein SLA1-putative secreted or membrane associated protein n=4 Tax=Rhodopirellula baltica TaxID=265606 RepID=Q7ULB7_RHOBA) HSP 1 Score: 393 bits (1009), Expect = 4.970e-132 Identity = 190/211 (90.05%), Postives = 195/211 (92.42%), Query Frame = 1 Query: 1 VSGTAMQPIAILGNGSTVVMIGMGKDRTTTNEDLQSWDIRDGKVQRGDTWKPYAGQSNAGIRFATAGPDNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPYWHTNADLSQLAIASTTQLVMVDLLEGKVTGSQSLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDLLENEWIQDTDVSGVGTSNGAIFCDDDYVLIDGSTLVDWKSGT 633 VSGTAM PIAILG+G T+VMIG KD TTTNEDLQSWDIRDGKVQR D WKPYAGQSN GIRFATAGPDNRLITCSK GHIVAWQMPQRRALWQIEMGSPPYWHTNADLSQLAIAS QLVMVDLLEGK+TGSQ LSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDL NEWIQDT++ GVGTS GAIFCDDDYVLIDGSTLVDWKSGT Sbjct: 199 VSGTAMHPIAILGDGGTIVMIGTDKDGTTTNEDLQSWDIRDGKVQRDDAWKPYAGQSNRGIRFATAGPDNRLITCSKAGHIVAWQMPQRRALWQIEMGSPPYWHTNADLSQLAIASAKQLVMVDLLEGKITGSQPLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDLRSNEWIQDTEIGGVGTSKGAIFCDDDYVLIDGSTLVDWKSGT 409
BLAST of mRNA_M-pyrifera_M_contig104973.1068.1 vs. uniprot
Match: A0A517NQF0_9BACT (SHD1 domain-containing protein n=1 Tax=Planctomycetes bacterium K23_9 TaxID=1930275 RepID=A0A517NQF0_9BACT) HSP 1 Score: 331 bits (849), Expect = 7.820e-108 Identity = 155/209 (74.16%), Postives = 179/209 (85.65%), Query Frame = 1 Query: 4 SGTAMQPIAILGNGSTVVMIGMGKDRTTTNEDLQSWDIRDGKVQRGDTWKPYAGQSNAGIRFATAGPDNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPYWHTNADLSQLAIASTTQLVMVDLLEGKVTGSQSLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDLLENEWIQDTDVSGVGTSNGAIFCDDDYVLIDGSTLVDWKSG 630 +G AM P+A+LG+G+T+VM+G GKD TT+ DLQSW +++G +QRG+ W PYA + N+ IRFATAGP N LITCSKGGH+VAW+MP RRA+WQIEMGSPPYWHT D S+LAIAS TQLV+VDL +GK+ GSQ LS LGRI YPKLSFNPSEDKLYLSSIGRVLILDL N WIQD DVSGVGTSNGAIFCDD YVLIDGS+LVDW+SG Sbjct: 195 TGAAMHPVALLGDGTTIVMVGTGKDGTTSTADLQSWRVKNGVLQRGEIWTPYADRRNSTIRFATAGPGNSLITCSKGGHVVAWEMPSRRAMWQIEMGSPPYWHTTEDQSRLAIASATQLVIVDLSDGKIVGSQPLSVLGRISYPKLSFNPSEDKLYLSSIGRVLILDLQSNRWIQDIDVSGVGTSNGAIFCDDKYVLIDGSSLVDWRSG 403
BLAST of mRNA_M-pyrifera_M_contig104973.1068.1 vs. uniprot
Match: UPI001E4F77B3 (DUF4261 domain-containing protein n=2 Tax=unclassified Rhodopirellula TaxID=2624920 RepID=UPI001E4F77B3) HSP 1 Score: 117 bits (293), Expect = 8.270e-27 Identity = 67/215 (31.16%), Postives = 114/215 (53.02%), Query Frame = 1 Query: 1 VSGTAMQPIAILGNGSTVVMIGMGKDRTTTNEDLQSWDIRDGKVQRGDTWKPYAGQS----------NAGIRFATAGPDNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPYWHTNADLSQLAIASTTQLVMVDLLEGKVTGSQSLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDLLENEWIQDTDVSGVGTSNGAIFCDDDYVLIDGSTLV 615 V+G + QP+A ++ M M R + E LQ W + + +V++ W P+ +GIRF ++ L+ + GH+V W + + +G+ P W A+ LA+A++++L +VD+ ++ +SL+DLG I +PKL F+ +L+LSS+ R++IL + D V G+ TSNGAIF D D VL++G+ L+ Sbjct: 438 VAGVSAQPLAY---SASCQMAWMSAGRQS--EMLQGWRLHEDQVEQSKPWDPFQSVPAPRLPERRLRTSGIRFVYPMANSTLVVGNTNGHVVIWNIETMAPVAHYHVGNRPAWAVTANGHLLALATSSELTIVDVRTNELVAKRSLADLGSISWPKLDFSRDASELFLSSVSRIVILSADDGSITDDFTVGGLSTSNGAIFVDRDQVLVNGTHLI 647
BLAST of mRNA_M-pyrifera_M_contig104973.1068.1 vs. uniprot
Match: A0A5C6E4M7_9BACT (SHD1 domain-containing protein n=2 Tax=Novipirellula artificiosorum TaxID=2528016 RepID=A0A5C6E4M7_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 1.340e-19 Identity = 57/213 (26.76%), Postives = 111/213 (52.11%), Query Frame = 1 Query: 16 MQPIAILGNGSTVVMIGMGKDRTTTNE--DLQSWDIRDGKVQRGDTWKPYA-----GQSNAGIRFATAGPDNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPY-WHTNADLSQLAIASTTQLVMVDLLEGKVTGSQSLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDLLENEWIQDTDVSGVGTSNGAI-FCDDDYVLIDGSTLVDWKS 627 M+P+A+L NGS+V+M+G DR + +LQ W ++ R +W PYA G+ +A + A R++T S GH+V W + R LW + + + D LA+ L++++ ++ GS +L + + +++++PS ++ +SI + ++D+ +W+ + + G + A+ + D+D+VL+D LVD +S Sbjct: 227 MRPLALLDNGSSVLMVGCSDDRGGYEKKTELQLWRFDGKRIVRSASWVPYAKDRDRGREDAEVLAAEVLDSRRVLTISDKGHVVLWDLAHRTPLWHSRLSERNFAMQLSVDRKLLALFDEKTLMVLNPETAEIFGSTALPQNTQTGWCRVAWSPSGKRILFTSISDIRVMDVESGQWLFEFSLPGGPVATRALSYPDEDFVLLDKRLLVDLRS 439
BLAST of mRNA_M-pyrifera_M_contig104973.1068.1 vs. uniprot
Match: A0A5C6BDH5_9BACT (SHD1 domain-containing protein n=1 Tax=Planctomycetes bacterium Poly21 TaxID=2528014 RepID=A0A5C6BDH5_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 2.440e-19 Identity = 58/213 (27.23%), Postives = 110/213 (51.64%), Query Frame = 1 Query: 16 MQPIAILGNGSTVVMIGMGKDRT--TTNEDLQSWDIRDGKVQRGDTWKPYA-----GQSNAGIRFATAGPDNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPY-WHTNADLSQLAIASTTQLVMVDLLEGKVTGSQSLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDLLENEWIQDTDVSGVGTSNGAI-FCDDDYVLIDGSTLVDWKS 627 M+P+A+L NGS+V+M+G DR +LQ W K+ R +W PYA G+++A + A +R++T S GH+V W + R+ +W + + + D LA+ L++++ ++ GS +L+ + +++++PS ++ L+SI V ++D +W + + G + A+ F D+ + L+D LVD +S Sbjct: 209 MRPLALLDNGSSVLMVGCSDDRGGYEKKSELQLWRFDGKKIVRSASWTPYAQDKDRGRADAEVLDAEVVNSSRVLTMSDKGHLVLWDLSNRKPIWHARLSERNFAMKLSVDRKLLAVFDEKTLMVLNPETAEILGSTALAPNTPTGWCRVAWSPSGKRILLTSIADVRVMDTKTGQWAFEFTLPGGPVATKALSFPDEKFALLDSRLLVDLES 421
BLAST of mRNA_M-pyrifera_M_contig104973.1068.1 vs. uniprot
Match: A0A5B9MKY8_9BACT (SHD1 domain-containing protein n=1 Tax=Stieleria maiorica TaxID=2795974 RepID=A0A5B9MKY8_9BACT) HSP 1 Score: 83.6 bits (205), Expect = 4.450e-15 Identity = 58/218 (26.61%), Postives = 93/218 (42.66%), Query Frame = 1 Query: 16 MQPIAILGNGSTVVMIGMGKDRT--TTNEDLQSWDIRDGKVQRGDTWKPYAGQSNAGIRFATAGP-------DNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPYWHTNADLSQLAIASTTQLVMVDLLEGKVTGSQSLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDLLENEWIQDTDVSGVG--TSNGAIFCDDDYVLIDGSTLVDWKSGTT 636 M P+A+L +G TV+M G G DR T + LQ W++ KV R W P+ A + + A P + L+ GH+ + + +W + D Q+ + L++VD G+ GS L R+ + K+ N S DK+ LS I + ++DL E I + G NG + D+ L++ L+ S T Sbjct: 220 MCPLAVLNDGQTVLMQGTGGDRDGFETGDQLQLWNLTGTKVTRSGIWVPFKDDKKAFGKTSNAHPVQAIPIDGDLLVMLGDNGHLACFDLASLTPVWHARLSRNFEVTLTTDRKQMFVLDEQTLMLVDPASGQSKGSMQLEGKPRLGWTKMRLNESGDKMLLSFINTLRVMDLTTGETIDEYSREGGAPIAPNGLSYPAPDFALLNNHLLLHIPSRIT 437
BLAST of mRNA_M-pyrifera_M_contig104973.1068.1 vs. uniprot
Match: A0A518HKK7_9BACT (SHD1 domain-containing protein n=1 Tax=Stieleria neptunia TaxID=2527979 RepID=A0A518HKK7_9BACT) HSP 1 Score: 80.5 bits (197), Expect = 5.110e-14 Identity = 55/210 (26.19%), Postives = 92/210 (43.81%), Query Frame = 1 Query: 16 MQPIAILGNGSTVVMIGMGKDRT--TTNEDLQSWDIRDGKVQRGDTWKPYAGQSNAGIRFATAGP-------DNRLITCSKGGHIVAWQMPQRRALWQIEMGSPPYWHTNADLSQLAIASTTQLVMVDLLEGKVTGSQSLSDLGRIYYPKLSFNPSEDKLYLSSIGRVLILDLLENEWIQDTDVSGVG--TSNGAIFCDDDYVLIDGSTL 612 M P+ I +G TV+M G GK+R T + LQ W + KV R W P+ A + A P ++ LI S GH+ +++ +W ++ D Q+ + L++VD G+ GS L R+ + K+ + S D++ +S + + I+DL E I + G + NG + DY L++ L Sbjct: 216 MCPLTIFNDGKTVLMQGTGKERDGFETGDQLQLWTLTGTKVTRSGIWVPFKDDKKAFGKTTNARPIKAVPIANDLLILLSDNGHLACFELATLNPIWHAKLSRNFEVTWTTDRKQMFVLDEQTLMLVDPQTGQSKGSLQLEGKPRLGWTKMRLSESGDRMLISYVNNLRIMDLKTGETIDEYSREGGAPLSPNGLSYPAPDYALLNNHLL 425 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104973.1068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104973.1068.1 >prot_M-pyrifera_M_contig104973.1068.1 ID=prot_M-pyrifera_M_contig104973.1068.1|Name=mRNA_M-pyrifera_M_contig104973.1068.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp MQPIAILGNGSTVVMIGMGKDRTTTNEDLQSWDIRDGKVQRGDTWKPYAGback to top mRNA from alignment at M-pyrifera_M_contig104973:3..638+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104973.1068.1 ID=mRNA_M-pyrifera_M_contig104973.1068.1|Name=mRNA_M-pyrifera_M_contig104973.1068.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig104973:3..638+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104973:3..638+ >mRNA_M-pyrifera_M_contig104973.1068.1 ID=mRNA_M-pyrifera_M_contig104973.1068.1|Name=mRNA_M-pyrifera_M_contig104973.1068.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig104973:3..638+ (Macrocystis pyrifera P11B4 male)back to top |