mRNA_M-pyrifera_M_contig104954.1063.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104954.1063.1 vs. uniprot
Match: C1MP01_MICPC (Filamin like protein n=5 Tax=Micromonas pusilla TaxID=38833 RepID=C1MP01_MICPC) HSP 1 Score: 72.0 bits (175), Expect = 1.730e-11 Identity = 50/175 (28.57%), Postives = 82/175 (46.86%), Query Frame = 1 Query: 1 RIVAPSSLTPPKVLLSGPEDIGVCDTEILLDASGSAGGGGRKLQFDWSL---QVFAGVYNETRLTSLQSFLVSSTNFALIRIPASFLDVGAQYWIDVRVTTFLGATASFSSLSGVGHLFRVSSAPLPKVILSGGRQQRLTRAQPLAVTAIGTLPNCGAAQGVVLPPNIELSYAWS 516 R++APSS+TPP +S P +G CD I D SGS+GGGGRKL++++ + A V ++ + ++ + G Y + ++VT +LG S V H F + P P + GG + + R L++ A +LP+ A P ++Y W+ Sbjct: 3494 RLLAPSSITPPVASISAPSAVGPCDN-IAFDVSGSSGGGGRKLRYEFGIVANDATADVGVVVAALXXXXXXXXXXXXDVVTLSSNVMTAGVSYNLTLQVTDYLG------SAHKVHHGFVKRAYPTPIARVLGGEDRTIRRGHALSLEADVSLPDVSCAS---FPAVANVTYEWT 3658
BLAST of mRNA_M-pyrifera_M_contig104954.1063.1 vs. uniprot
Match: C1EH03_MICCC (Filamin like protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EH03_MICCC) HSP 1 Score: 65.1 bits (157), Expect = 4.330e-9 Identity = 56/178 (31.46%), Postives = 84/178 (47.19%), Query Frame = 1 Query: 10 APSSLTPPKVLLSGPEDIGVCDTEILLDASGSAGGGGRKLQFDWSLQVFAGVYNETRLTSLQSFLVSSTNFA-------LIRIPASFLDVGAQYWIDVRVTTFLGATASFSSLSGVGHLFRVSSAPLPKVILSGGRQQRLTRAQPLAVTAIGTLPN--CGAAQGVVLPPNIELSYAWS 516 AP+ TPP+ LS P+ IG CD ++LDAS S GGGGR ++F +S V A + + + VS+ A +I + ++ L+ G Y VR T F G T++ S+ S P+P +S GR TR+ + + LP+ C A + I+ Y WS Sbjct: 2930 APAVPTPPEARLSVPDKIGPCDG-VVLDASQSRGGGGRPMEFRYS--VVATATDGSAVADALGAAVSAAAAARGGVTNPVIVLESAHLEPGVSYTFTVRATDFTGGTSTASAT------VTKSVYPMPISKISSGRTYTATRSHAVTIEGDVQLPSVACDAIAATEVGDGID--YRWS 3096
BLAST of mRNA_M-pyrifera_M_contig104954.1063.1 vs. uniprot
Match: A0A7D9L656_PARCT (REJ domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L656_PARCT) HSP 1 Score: 64.3 bits (155), Expect = 7.360e-9 Identity = 49/171 (28.65%), Postives = 81/171 (47.37%), Query Frame = 1 Query: 4 IVAPSSLTPPKVLLSGPEDIGVCDTEILLDASGSAGGGGRKLQFDWSLQVFAGVYNETRLTSLQSFLVSSTNFALIRIPASFLDVGAQYWIDVRVTTFLGATASFSSLSGVGHLFRVSSAPLPKVILSGGRQQRLTRAQPLAVTAIGTLPNCGAAQGVVLPPNIELSYAWS 516 I+ P + P ++ GP I C + LD S S+GGGGR L++ WSL+ + V NE + + L ++ N A + I + + G Y + V+ F+ + A +++S ++ PLP+V L G Q + + VTA +C + LSY+WS Sbjct: 583 ILPPGNPVKPVPVIFGPTQISSCG-HLTLDGSQSSGGGGRNLEYGWSLEGW--VDNE-----ITAVLNAAVNNARVFINGTLMSAGTTYEFKLAVSNFISSQAVATNIS-----VTKATDPLPEVTLEGPLQGKAMAGKAFYVTATAKAASCSTEKA--------LSYSWS 732
BLAST of mRNA_M-pyrifera_M_contig104954.1063.1 vs. uniprot
Match: F0YIV2_AURAN (REJ domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIV2_AURAN) HSP 1 Score: 62.8 bits (151), Expect = 2.710e-8 Identity = 56/173 (32.37%), Postives = 81/173 (46.82%), Query Frame = 1 Query: 4 IVAPSSLTPPKVLLSGPEDIGVCDTEILLDASGSAGGGGRKLQFDWSLQVFAGVYNETRLTSLQSFLVSSTNFALIRIPASFLDVGAQYWIDVRV--TTFLGATASFSSLSGVGHLFRVSSAPLPKVILSGGRQQRLTRAQPLAVTAIGTLPNCGAAQGVVLPPNIELSYAWS 516 + AP P+V+L P + G C ++ LDAS +AGGGGR L F WS T A + + A+ L A +DV V T FLG T++ ++ RV +P V +SGG ++ L R++PL V A + C AA G+ + L YAW+ Sbjct: 1853 LAAPDPAVAPRVVLVAPLEAGSCG-DLELDASQTAGGGGRPLAFAWSA------------TGALGAAXXXXXGATLVVAAADLAAAAGTTVDVEVAATNFLGETSAATAS------VRVRGEAIPTVAISGGARRELRRSEPLEVFA--SAEACAAA-GL---DSAALDYAWA 2000
BLAST of mRNA_M-pyrifera_M_contig104954.1063.1 vs. uniprot
Match: A0A7S0ESY2_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0ESY2_9CRYP) HSP 1 Score: 58.9 bits (141), Expect = 5.770e-7 Identity = 44/143 (30.77%), Postives = 68/143 (47.55%), Query Frame = 1 Query: 31 PKVLLSGPEDIGVCDTEILLDASGSAGGGGRKLQFDWSLQVFAGVYNETRLTSLQSFLVSSTNFALIRIPASFLDVGAQYWIDVRVTTFLGATASFSSLSGVGHLFRVSSAPLPKVILSGGRQQRLTRAQPLAVTAIGTLPNC 459 P +++ + G+C+ +++LDAS S GG GRK+ F W ++ G+ E +TS +L + A + S L G Y +R+T FL S VS PLPKV + G + +TR + +V LP C Sbjct: 1834 PTIVVRSAKMYGMCE-DVVLDASASYGGAGRKMTFLWGVRP--GIPKEEAVTS---YLTQIGSVANCTVANSLLSPGTSYTFVLRITNFL------EQFSEQEIPVVVSQYPLPKVYIIGSSIRSVTREKGFSVEGYSALPLC 1964
BLAST of mRNA_M-pyrifera_M_contig104954.1063.1 vs. uniprot
Match: A0A6S7HF03_PARCT (Receptor for egg jelly (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HF03_PARCT) HSP 1 Score: 57.4 bits (137), Expect = 1.810e-6 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 1 Query: 52 PEDIGVCDTEILLDASGSAGGGGRKLQFDWSLQVFAGVYNETRLTSLQSFLVSSTNFALIRIPASFLDVGAQYWIDVRVTTFLGATASFSSLSGVGHLFRVSSA--PLPKVILSGGRQQRLTRAQPLAVTAIGTLPNCGAAQGVVLPPNIELSYAWS 516 P I C + LD S S+GGGGR L++ WSL+ G N+ + + L ++ N A + I S + G+ Y + V FL +TA + H V+ A PLP+V ++G R+ ++ VTA +C + + L++AWS Sbjct: 1 PAQISSCG-HLTLDGSQSSGGGGRNLEYGWSLE---GQGND----EITAVLNAAINEARVFINGSLMTSGSTYTFKLTVKNFLYSTA-------MDHSLTVTKARDPLPEVTVNGPREGKVFGMNAFYVTAKAKAASCSSTKA--------LTFAWS 134 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104954.1063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104954.1063.1 >prot_M-pyrifera_M_contig104954.1063.1 ID=prot_M-pyrifera_M_contig104954.1063.1|Name=mRNA_M-pyrifera_M_contig104954.1063.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp RIVAPSSLTPPKVLLSGPEDIGVCDTEILLDASGSAGGGGRKLQFDWSLQback to top mRNA from alignment at M-pyrifera_M_contig104954:7..522+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104954.1063.1 ID=mRNA_M-pyrifera_M_contig104954.1063.1|Name=mRNA_M-pyrifera_M_contig104954.1063.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig104954:7..522+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104954:7..522+ >mRNA_M-pyrifera_M_contig104954.1063.1 ID=mRNA_M-pyrifera_M_contig104954.1063.1|Name=mRNA_M-pyrifera_M_contig104954.1063.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig104954:7..522+ (Macrocystis pyrifera P11B4 male)back to top |