mRNA_M-pyrifera_M_contig104929.1055.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104929.1055.1 vs. uniprot
Match: A0A0M9GM44_9HYPH (Abasic site processing protein n=1 Tax=Ahrensia marina TaxID=1514904 RepID=A0A0M9GM44_9HYPH) HSP 1 Score: 255 bits (652), Expect = 2.470e-83 Identity = 126/208 (60.58%), Postives = 153/208 (73.56%), Query Frame = 1 Query: 1 YNALMIIGETDRGLNTAPRTNVAPTQDVKFIAR-QDGENRTLEGQWWLVPAWAKEKTKFAAFNARSETAYKSGAFRDAFKSKRCLIPADGYYEWTKNAEDGKKDPWCITLPDWQPFAFAGLWARNDHLGITSCTVLTAPAAPEIEHLHHRMPIILNPARFEQWLDAETSVGDAREMLPDNRGAELVSYRVGRAVNSSRASGAALIEPV 621 Y+AL +I +G N PR NV PTQ V F+ R +DG +G+WWLVP WAKE K+ FNARSETA +FR+AFKSKRCLIPA YYEWTK AEDG KDP+ I LPD +PF FAGLWA N +L +TSCT+LTA AAP+I HLH RMPII +E+WLDA T V DA+ +L +NR +ELVSYRV RAVNS++ASG+ L+EP+ Sbjct: 15 YDALNLIPTEAKGRNDPPRYNVTPTQQVGFVTRDKDGRLSVQDGRWWLVPFWAKELPKYPLFNARSETAVSKSSFREAFKSKRCLIPASSYYEWTK-AEDGGKDPYNIHLPDNEPFFFAGLWAHNYNLDVTSCTILTAAAAPQIAHLHDRMPIIPKEGVWEEWLDAGTKVEDAKALLDNNRRSELVSYRVARAVNSNKASGSHLVEPL 221
BLAST of mRNA_M-pyrifera_M_contig104929.1055.1 vs. uniprot
Match: A0A7H4K6D6_9HYPH (Abasic site processing protein n=1 Tax=Oricola sp. TaxID=1979950 RepID=A0A7H4K6D6_9HYPH) HSP 1 Score: 252 bits (643), Expect = 5.570e-82 Identity = 127/208 (61.06%), Postives = 149/208 (71.63%), Query Frame = 1 Query: 1 YNALMIIGETDRGLNTAPRTNVAPTQDVKFIARQ-DGENRTLEGQWWLVPAWAKEKTKFAAFNARSETAYKSGAFRDAFKSKRCLIPADGYYEWTKNAEDGKKDPWCITLPDWQPFAFAGLWARNDHLGITSCTVLTAPAAPEIEHLHHRMPIILNPARFEQWLDAETSVGDAREMLPDNRGAELVSYRVGRAVNSSRASGAALIEPV 621 + A+ II DRG NT R N+ P QDV F+A +G +EGQWWLVP WAKEK ++A FNARSE A+K AFRDAFKSKRCLI ADG++EWTK EDG KDP I LPD +PFAFAGLWA ND L +TSCT+LTA A P I HLH RMPIIL W+D TSV +AR +L ++R EL+S RVGRAVNS+RA G LIEP+ Sbjct: 15 HAAMSIIPADDRGRNTGARYNITPMQDVLFVASDTEGTPVVMEGQWWLVPHWAKEKPEWALFNARSEDAHKKPAFRDAFKSKRCLIVADGFFEWTKG-EDGGKDPHHIFLPDHEPFAFAGLWAHNDALDVTSCTILTAAADPAIAHLHDRMPIILKDDVHAAWIDRGTSVDEARALLKEHRDGELISNRVGRAVNSNRAKGPELIEPL 221
BLAST of mRNA_M-pyrifera_M_contig104929.1055.1 vs. uniprot
Match: A0A285M4A9_9HYPH (Abasic site processing protein n=1 Tax=Cohaesibacter sp. ES.047 TaxID=1798205 RepID=A0A285M4A9_9HYPH) HSP 1 Score: 247 bits (630), Expect = 6.840e-80 Identity = 116/202 (57.43%), Postives = 149/202 (73.76%), Query Frame = 1 Query: 16 IIGETDRGLNTAPRTNVAPTQDVKFIARQDGENRTLEGQWWLVPAWAKE-KTKFAAFNARSETAYKSGAFRDAFKSKRCLIPADGYYEWTKNAEDGKKDPWCITLPDWQPFAFAGLWARNDHLGITSCTVLTAPAAPEIEHLHHRMPIILNPARFEQWLDAETSVGDAREMLPDNRGAELVSYRVGRAVNSSRASGAALIEP 618 +I D N PR N+APTQ++ ++A +GE R L G+WWLVP WAK+ + ++ FNARSE A+K AFR+AFK RCLIPADGYYEWTK+ +DGKKDP + LPD++ FAFAGL A N+ LG+ SCT+LTAPA EI+H+HHRMP+IL P ++ WLD V DAR +L ++R EL+SY+V RAV +SRASG LIEP Sbjct: 20 LIHPEDTHRNVPPRYNIAPTQEILYVADVNGERRLLSGRWWLVPHWAKDLQNEYPMFNARSEEAHKKPAFREAFKYGRCLIPADGYYEWTKSPKDGKKDPHLLHLPDFEAFAFAGLSAFNETLGLFSCTILTAPAVKEIKHIHHRMPVILKPEVYDTWLDRSNGVDDARAVLNEHRDHELISYQVDRAVGNSRASGEKLIEP 221
BLAST of mRNA_M-pyrifera_M_contig104929.1055.1 vs. uniprot
Match: UPI000478BDD3 (SOS response-associated peptidase n=1 Tax=Ahrensia sp. 13_GOM-1096m TaxID=1380380 RepID=UPI000478BDD3) HSP 1 Score: 245 bits (625), Expect = 2.740e-79 Identity = 120/207 (57.97%), Postives = 146/207 (70.53%), Query Frame = 1 Query: 1 YNALMIIGETDRGLNTAPRTNVAPTQDVKFIARQDGENRTLEGQWWLVPAWAKEKTKFAAFNARSETAYKSGAFRDAFKSKRCLIPADGYYEWTKNAEDGKKDPWCITLPDWQPFAFAGLWARNDHLGITSCTVLTAPAAPEIEHLHHRMPIILNPARFEQWLDAETSVGDAREMLPDNRGAELVSYRVGRAVNSSRASGAALIEPV 621 + AL II RG N PR NVAPTQ V F+ + + + +G+WWLVP WAKE K+ FNARSETA++ +FR+AFKSKRCLIPA YYEWT + EDGKKDP I+LPD +PF FAGLWA N +L ITSCT+LT+ A I HLH RMPIIL + +WLD V A +L ++RG+ELVSYRVGR VNSS+A GA LI P+ Sbjct: 15 HAALGIIPSDARGRNDPPRYNVAPTQHVGFVCQDENDIVVKDGRWWLVPFWAKEIPKYPMFNARSETAHEKSSFREAFKSKRCLIPATAYYEWTVS-EDGKKDPHYISLPDREPFFFAGLWATNSNLDITSCTILTSEADAAISHLHDRMPIILKETAWSEWLDKSKDVESAHSLLTNDRGSELVSYRVGREVNSSKAKGAELIAPI 220
BLAST of mRNA_M-pyrifera_M_contig104929.1055.1 vs. uniprot
Match: A0A848YDF2_9HYPH (Abasic site processing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A848YDF2_9HYPH) HSP 1 Score: 239 bits (611), Expect = 3.660e-77 Identity = 115/189 (60.85%), Postives = 137/189 (72.49%), Query Frame = 1 Query: 25 ETDRGLNTAPRTNVAPTQDVKFIARQDGENRTLEGQWWLVPAWAKEKTKFAAFNARSETAYKSGAFRDAFKSKRCLIPADGYYEWTKNAEDGKKDPWCITLPDWQPFAFAGLWARNDHLGITSCTVLTAPAAPEIEHLHHRMPIILNPARFEQWLDAETSVGDAREMLPDNRGAELVSYRVGRAVNSSR 591 +T LN R+N+APTQDV FIA G G+WWLVP WAKE K+A FNARSE A+ AFRDAFK + CLIPA GYYEWTK AEDG KDP I LP QPF+FAGLWA N+HL +TSCT+LTA AA EI HLHHRMPIIL P + +WLD E+ V +++ +L +N G +LVS RVGR +NSS+ Sbjct: 22 DTGPALNLPIRSNIAPTQDVPFIAWDAGHRVFKTGRWWLVPHWAKEMPKYAMFNARSEDAHMKPAFRDAFKQRHCLIPASGYYEWTK-AEDGGKDPHLIHLPHNQPFSFAGLWAHNEHLDVTSCTILTAAAADEIVHLHHRMPIILAPESYTRWLDPESGVAESKAVLEENLGHQLVSERVGREINSSK 209
BLAST of mRNA_M-pyrifera_M_contig104929.1055.1 vs. uniprot
Match: A0A1I5ESW2_9HYPH (Abasic site processing protein n=2 Tax=Cohaesibacter marisflavi TaxID=655353 RepID=A0A1I5ESW2_9HYPH) HSP 1 Score: 239 bits (609), Expect = 1.020e-76 Identity = 113/202 (55.94%), Postives = 146/202 (72.28%), Query Frame = 1 Query: 16 IIGETDRGLNTAPRTNVAPTQDVKFIARQDGENRTLEGQWWLVPAWAKE-KTKFAAFNARSETAYKSGAFRDAFKSKRCLIPADGYYEWTKNAEDGKKDPWCITLPDWQPFAFAGLWARNDHLGITSCTVLTAPAAPEIEHLHHRMPIILNPARFEQWLDAETSVGDAREMLPDNRGAELVSYRVGRAVNSSRASGAALIEP 618 +I DR N R N+APTQ V ++ +GE R +EG+WWLVP WAKE + ++ FNARSE A+ +FRDA+K+ RCLIPADGYYEWT + DGKKDP + LPD++PFAFAGL A N L + SCT+LTAPA EI +H RMP+IL P+ F+ WL A TSV +A +L ++R +EL+SY+V RAV SSRASG+ L+EP Sbjct: 20 LIRPEDRQRNVPARYNIAPTQSVLYVGEPNGERRLMEGRWWLVPHWAKELQNRYPMFNARSEEAHNKPSFRDAYKTGRCLIPADGYYEWTTSKADGKKDPHLLHLPDFEPFAFAGLSAYNPFLDLYSCTILTAPAVDEIRAIHPRMPVILKPSVFDAWLSAGTSVDEASSLLSEHRDSELISYQVDRAVGSSRASGSQLMEP 221
BLAST of mRNA_M-pyrifera_M_contig104929.1055.1 vs. uniprot
Match: UPI001572DE13 (SOS response-associated peptidase n=1 Tax=Rhizobium radiobacter TaxID=358 RepID=UPI001572DE13) HSP 1 Score: 238 bits (606), Expect = 2.250e-76 Identity = 114/203 (56.16%), Postives = 142/203 (69.95%), Query Frame = 1 Query: 16 IIGETDRGLNTAPRTNVAPTQDVKFIARQ-DGENRTLEGQWWLVPAWAKEKTKFAAFNARSETAYKSGAFRDAFKSKRCLIPADGYYEWTKNAEDGKKDPWCITLPDWQPFAFAGLWARNDHLGITSCTVLTAPAAPEIEHLHHRMPIILNPARFEQWLDAETSVGDAREMLPDNRGAELVSYRVGRAVNSSRASGAALIEPV 621 + E DRG NT PR N+APTQ+V F+ DG+ EG+WWLVP WAKE K FNARSETA + AFRDAFKS+RCLIPADG+YEWT + +DGKKD W IT P PF+FAGLWA ND LG+TSCT+LTA A ++ LH+R P+IL+P ++ WL AET+V DA E+L + +L +RV R VNSS+ A I P+ Sbjct: 20 LTSEQDRGRNTEPRYNIAPTQNVLFVHHDNDGKQVLDEGRWWLVPFWAKELPKATLFNARSETAATTPAFRDAFKSRRCLIPADGFYEWTVSQDDGKKDAWYITQPGAAPFSFAGLWAHNDRLGVTSCTILTAEAEEPMKQLHNRQPVILDPEFYDAWLSAETTVPDATELLKHHLDGQLQFHRVSRDVNSSKFQDATAINPL 222
BLAST of mRNA_M-pyrifera_M_contig104929.1055.1 vs. uniprot
Match: UPI001FE0504E (SOS response-associated peptidase n=1 Tax=Rhizobium leguminosarum TaxID=384 RepID=UPI001FE0504E) HSP 1 Score: 237 bits (605), Expect = 3.630e-76 Identity = 114/200 (57.00%), Postives = 140/200 (70.00%), Query Frame = 1 Query: 25 ETDRGLNTAPRTNVAPTQDVKFIAR-QDGENRTLEGQWWLVPAWAKEKTKFAAFNARSETAYKSGAFRDAFKSKRCLIPADGYYEWTKNAEDGKKDPWCITLPDWQPFAFAGLWARNDHLGITSCTVLTAPAAPEIEHLHHRMPIILNPARFEQWLDAETSVGDAREMLPDNRGAELVSYRVGRAVNSSRASGAALIEPV 621 ++DRG NTAPR N+APTQ+V FI +DG+ EG+WWLVP WAKE K FNARSETA + AFRDAFK +RCLIPADG+YEWT N +DGKKDPW I P PF+FAGLWA N+ LG+TSCT+LTA A + LH R P+IL+PA +E WL A+T+V A E+L + L +RV R VNSS+ G I P+ Sbjct: 27 DSDRGRNTAPRYNIAPTQNVLFIHNDKDGKQTVDEGRWWLVPFWAKEMPKATLFNARSETAATTPAFRDAFKYRRCLIPADGFYEWTVNQDDGKKDPWFIYQPGEAPFSFAGLWAHNEKLGVTSCTILTAAAEEPMTQLHDRQPVILDPASYEDWLSADTTVPQATELLKHHLDGRLEFHRVSRDVNSSKFQGKPEINPL 226
BLAST of mRNA_M-pyrifera_M_contig104929.1055.1 vs. uniprot
Match: A0A1V3RAB3_9HYPH (Abasic site processing protein n=2 Tax=Sinorhizobium/Ensifer group TaxID=227292 RepID=A0A1V3RAB3_9HYPH) HSP 1 Score: 237 bits (604), Expect = 4.230e-76 Identity = 115/196 (58.67%), Postives = 139/196 (70.92%), Query Frame = 1 Query: 37 GLNTAPRTNVAPTQDVKFIARQDGENRTLE-GQWWLVPAWAKEKTKFAAFNARSETAYKSGAFRDAFKSKRCLIPADGYYEWTKNAEDGKKDPWCITLPDWQPFAFAGLWARNDHLGITSCTVLTAPAAPEIEHLHHRMPIILNPARFEQWLDAETSVGDAREMLPDNRGAELVSYRVGRAVNSSRASGAALIEPV 621 G NT PR N+APTQ V F+ N+ LE G+WWLVP WAKE K A FNARSE A K +FRDAFKSKRCLIPADG+YEWTK AEDG KDPW I LPD QPF+FAGLWA ND L +TSCT+LT A ++ LH R PIIL+P +++WL AETSV DA+ +L N +L +RV R +NSS+ +G L+ + Sbjct: 26 GRNTPPRYNIAPTQTVPFVHNDKEGNQVLEDGRWWLVPFWAKEMPKIALFNARSEDAEKKPSFRDAFKSKRCLIPADGFYEWTK-AEDGGKDPWFIHLPDRQPFSFAGLWAHNDALDVTSCTILTMAAGAPMQQLHDRQPIILDPTAYDEWLSAETSVADAKALLGRNLDNQLQFHRVSREINSSKFTGNPLLPAI 220
BLAST of mRNA_M-pyrifera_M_contig104929.1055.1 vs. uniprot
Match: A0A2P7RTW2_9HYPH (Abasic site processing protein n=1 Tax=Mesorhizobium soli TaxID=1295366 RepID=A0A2P7RTW2_9HYPH) HSP 1 Score: 236 bits (603), Expect = 7.550e-76 Identity = 120/212 (56.60%), Postives = 147/212 (69.34%), Query Frame = 1 Query: 4 NALMIIGETDRGLNTAPRTNVAPTQDVKFI-ARQDGENRTLEGQWWLVPAWAKEKTKFAAFNARSETAYKSGAFRDAFKSKRCLIPADGYYEWTKNAEDGKKDPWCITLPDWQPFAFAGLWARNDHLGITSCTVLTAPAAPEIEHLHHRMPIILNPARFEQWLDAETSVGDAREMLPDNRGAELVSYRVGRAVNSS-----RASGAALIEPV 621 +AL + TDRG NT R N+APTQDV FI A DG ++ EG+WWLVP WAKE KF FNARSE A AFRD+FK+KRCLIPADG+YEW+K EDG+KDPW I LP+ QPF+FAGLWA N L +TSCT+LTA A ++ LH R PIIL+P+ ++ WLD TSV A+++L + L YRV RAVNSS R A +IEP+ Sbjct: 15 HALYRLTITDRGRNTEARYNIAPTQDVTFITAGDDGYHKVREGRWWLVPFWAKELPKFTLFNARSEDADSKPAFRDSFKAKRCLIPADGFYEWSKG-EDGEKDPWHIHLPEHQPFSFAGLWAYNQALDVTSCTILTAAAQEPMKQLHDRQPIILDPSVYDAWLDPSTSVSGAKDLLKSDLDGSLEFYRVNRAVNSSTKDRRRNDNANMIEPL 225 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104929.1055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104929.1055.1 >prot_M-pyrifera_M_contig104929.1055.1 ID=prot_M-pyrifera_M_contig104929.1055.1|Name=mRNA_M-pyrifera_M_contig104929.1055.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp MIIGETDRGLNTAPRTNVAPTQDVKFIARQDGENRTLEGQWWLVPAWAKEback to top mRNA from alignment at M-pyrifera_M_contig104929:2..625+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104929.1055.1 ID=mRNA_M-pyrifera_M_contig104929.1055.1|Name=mRNA_M-pyrifera_M_contig104929.1055.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig104929:2..625+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104929:2..625+ >mRNA_M-pyrifera_M_contig104929.1055.1 ID=mRNA_M-pyrifera_M_contig104929.1055.1|Name=mRNA_M-pyrifera_M_contig104929.1055.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig104929:2..625+ (Macrocystis pyrifera P11B4 male)back to top |