mRNA_M-pyrifera_M_contig104863.1046.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104863.1046.1 vs. uniprot
Match: A0A1B1YQB2_9GAMM (Uncharacterized protein n=4 Tax=Bacteria TaxID=2 RepID=A0A1B1YQB2_9GAMM) HSP 1 Score: 326 bits (836), Expect = 1.000e-106 Identity = 153/211 (72.51%), Postives = 177/211 (83.89%), Query Frame = 1 Query: 1 VGIKTGQAYTNNLRDGRSLYVNGERVQDVTRYAPYKGIISEISAHFDRFHDPELQPRMTHPSPVNGEPVSNSFLLTRTWEEMLQRVDGESLRKDATYGMMGRLPDFMNAFVTDVAAI-PHVLGHRDKAFAENALRYWEYCRDEDICLTHTLVDPKRDYSKGLESQRALKFVRETDSGIVVDGARMLSTLAPVSEELWVGPFMPRKPDEEDY 630 +GI+TG Y +LRD R+LY+ G+RV+DVT YAP GI+ I HFD FH PELQ T+ SP +G+PVSNSFL RTW+E+ QR+ GESLRK+AT+G+MGRLPDFMNAFVTD A I PHVLGHRDKAFA+NA+RYWEYCRD+DICLTHTLVDPKRDY K L +QRALK VRETD+GIVV GARMLSTLAPVS E+WVGPFMPR+P EEDY Sbjct: 1 MGIRTGAQYIASLRDDRALYIAGQRVRDVTAYAPLAGILGSIGEHFDAFHKPELQADYTYASPTDGQPVSNSFLPARTWDEVQQRLRGESLRKEATFGLMGRLPDFMNAFVTDAAVIAPHVLGHRDKAFADNAIRYWEYCRDQDICLTHTLVDPKRDYGKDLSAQRALKVVRETDAGIVVSGARMLSTLAPVSNEIWVGPFMPRRPGEEDY 211
BLAST of mRNA_M-pyrifera_M_contig104863.1046.1 vs. uniprot
Match: A0A661ENS0_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661ENS0_9GAMM) HSP 1 Score: 293 bits (749), Expect = 2.750e-94 Identity = 137/209 (65.55%), Postives = 168/209 (80.38%), Query Frame = 1 Query: 1 VGIKTGQAYTNNLRDGRSLYVNGERVQDVTRYAPYKGIISEISAHFDRFHDPELQPRMTHPSPVNGEPVSNSFLLTRTWEEMLQRVDGESLRKDATYGMMGRLPDFMNAFVTDVAAI-PHVLGHRDKAFAENALRYWEYCRDEDICLTHTLVDPKRDYSKGLESQRALKFVRETDSGIVVDGARMLSTLAPVSEELWVGPFMPRKPDEE 624 +G+KTG Y L DGR+LY+ GERV++ +YAP +GII IS H+D FH PELQ R T+ SP +G PVSNSFL TWE+M QR+ GE+LRK+ATYGMMGR+PDFMNAFVTD+A I PHVLGH+DK FA+NA+ Y++YCRD+DIC+THTL DP++DYSK L Q +++ VRE D GI V GARMLSTLAPVS EL+VGPFMPR+P EE Sbjct: 1 MGLKTGAQYRELLNDGRALYIGGERVKNPNQYAPLQGIIKTISEHYDDFHKPELQARYTYASPADGAPVSNSFLEAVTWEQMEQRIIGETLRKEATYGMMGRMPDFMNAFVTDLAVIAPHVLGHKDKTFADNAINYYQYCRDQDICVTHTLADPRKDYSKPLGEQNSVRIVREADDGIYVTGARMLSTLAPVSHELFVGPFMPRQPGEE 209
BLAST of mRNA_M-pyrifera_M_contig104863.1046.1 vs. uniprot
Match: A0A661ETC6_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661ETC6_9GAMM) HSP 1 Score: 285 bits (729), Expect = 2.810e-91 Identity = 135/209 (64.59%), Postives = 166/209 (79.43%), Query Frame = 1 Query: 1 VGIKTGQAYTNNLRDGRSLYVNGERVQDVTRYAPYKGIISEISAHFDRFHDPELQPRMTHPSPVNGEPVSNSFLLTRTWEEMLQRVDGESLRKDATYGMMGRLPDFMNAFVTDVAAI-PHVLGHRDKAFAENALRYWEYCRDEDICLTHTLVDPKRDYSKGLESQRALKFVRETDSGIVVDGARMLSTLAPVSEELWVGPFMPRKPDEE 624 +G+KTG Y L DGRSLY+ GE V++ YAP +GII +S H+D F+ PELQ T+ SP +G+PVSNSFL +W E+ QR+ GE+LRK+ATYGMMGR+PDFMNAFVTD+ I PHVLGH+DKAFAENA++Y+E+CRDEDICLTHTL DP++DYSK L Q +++ VRE D GI V GARMLSTLAPVS EL+VGPFMPR+P EE Sbjct: 1 MGLKTGAEYRELLNDGRSLYIGGELVRNPNDYAPLQGIIQTVSEHYDEFYKPELQASYTYASPADGKPVSNSFLEAVSWPEIEQRMTGETLRKEATYGMMGRMPDFMNAFVTDMRLIAPHVLGHQDKAFAENAIKYYEFCRDEDICLTHTLADPRKDYSKPLGEQNSVRMVREADDGIYVTGARMLSTLAPVSHELFVGPFMPRQPGEE 209
BLAST of mRNA_M-pyrifera_M_contig104863.1046.1 vs. uniprot
Match: A0A7Y4X4F2_9DELT (4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4X4F2_9DELT) HSP 1 Score: 276 bits (706), Expect = 9.970e-88 Identity = 129/210 (61.43%), Postives = 166/210 (79.05%), Query Frame = 1 Query: 1 VGIKTGQAYTNNLRDGRSLYVNGERVQDVTRYAPYKGIISEISAHFDRFHDPELQPRMTHPSPVNGEPVSNSFLLTRTWEEMLQRVDGESLRKDATYGMMGRLPDFMNAFVTDVAAIPHVLGHRDKAFAENALRYWEYCRDEDICLTHTLVDPKRDYSKGLESQRALKFVRETDSGIVVDGARMLSTLAPVSEELWVGPFMPRKPDEEDY 630 +G +TG+AY LRD R +YVNGE V+DVT+Y P++G+I ++ +DR DP P MT PSP +G+PVS SF+L +T EEM+QRV+GE R + TYG+MGRLPDFMNAFV D AAI +LG ++ F ENA Y+E CR++D+CLTHTLVDP+ D SKG+E+Q AL+ V+ETD+G++V GARMLSTLAPVS+ELWVGP+MPRKP EEDY Sbjct: 1 MGARTGKAYIEGLRDDRRIYVNGELVRDVTQYRPFQGVIRTLADLYDRQSDPTYAPFMTTPSPTSGQPVSTSFVLAKTQEEMVQRVNGERARCELTYGLMGRLPDFMNAFVADTAAIRDLLGRQNPRFGENAWTYYEQCREQDLCLTHTLVDPQIDRSKGVEAQEALRVVKETDAGLLVRGARMLSTLAPVSDELWVGPYMPRKPGEEDY 210
BLAST of mRNA_M-pyrifera_M_contig104863.1046.1 vs. uniprot
Match: A0A1Y0BFL9_9BACT (E123 n=2 Tax=environmental samples TaxID=48479 RepID=A0A1Y0BFL9_9BACT) HSP 1 Score: 270 bits (691), Expect = 1.560e-85 Identity = 125/210 (59.52%), Postives = 166/210 (79.05%), Query Frame = 1 Query: 1 VGIKTGQAYTNNLRDGRSLYVNGERVQDVTRYAPYKGIISEISAHFDRFHDPELQPRMTHPSPVNGEPVSNSFLLTRTWEEMLQRVDGESLRKDATYGMMGRLPDFMNAFVTDVAAIPHVLGHRDKAFAENALRYWEYCRDEDICLTHTLVDPKRDYSKGLESQRALKFVRETDSGIVVDGARMLSTLAPVSEELWVGPFMPRKPDEEDY 630 +G +TG+ Y+ LRD R +YV GE V+DVT+Y P++G+I ++ +DR +P+ + +T PSP + PVS SF+L +TWEEM QRV GE LR + TYG+MGRLPDFMNAFVTD+AAI +LG + F ENA RY+E CR++D+CLTHTLVDP+ D S+G+E+Q AL+ V+ETD+G++V GARMLSTLAPVS+ELWVGP+MPRKP +EDY Sbjct: 1 MGTRTGREYSEGLRDNRHIYVKGELVRDVTQYPPFQGVIRTLADLYDRQQEPQSRGALTTPSPTSDNPVSTSFVLAKTWEEMEQRVSGERLRCEFTYGLMGRLPDFMNAFVTDMAAIRPLLGRQRPEFGENAWRYYELCREKDLCLTHTLVDPQVDRSQGVEAQDALRIVKETDAGLLVRGARMLSTLAPVSDELWVGPYMPRKPGQEDY 210
BLAST of mRNA_M-pyrifera_M_contig104863.1046.1 vs. uniprot
Match: A0A3D3UEL1_9PROT (4-hydroxyphenylacetate 3-hydroxylase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UEL1_9PROT) HSP 1 Score: 264 bits (674), Expect = 5.110e-83 Identity = 121/210 (57.62%), Postives = 158/210 (75.24%), Query Frame = 1 Query: 1 VGIKTGQAYTNNLRDGRSLYVNGERVQDVTRYAPYKGIISEISAHFDRFHDPELQPRMTHPSPVNGEPVSNSFLLTRTWEEMLQRVDGESLRKDATYGMMGRLPDFMNAFVTDVAAIPHVLGHRDKAFAENALRYWEYCRDEDICLTHTLVDPKRDYSKGLESQRALKFVRETDSGIVVDGARMLSTLAPVSEELWVGPFMPRKPDEEDY 630 +G +TGQ Y LRDGR +YVNG+ V+DVT Y Y+G++ E++ H+DR HD ++T SP +G PVSNSFL R + + QR+ GE LR + TYG+MGRLPDF+NA+VTD+AA+PHVLG +DK FAENA Y+ YCRD D+C+THTL+DP D KG ++Q+ L VRE+D+GI+V GARMLSTLAP+S+EL VGPF+PR EE Y Sbjct: 1 MGARTGQQYIEGLRDGRRIYVNGDLVRDVTDYHGYRGVVRELARHYDRHHDAAFAEKLTFASPRDGAPVSNSFLFARDRDSLEQRIVGERLRCEQTYGLMGRLPDFLNAWVTDMAAVPHVLGAKDKKFAENAANYYAYCRDNDVCMTHTLLDPHVDRGKGPDAQQGLHIVRESDAGIIVSGARMLSTLAPISDELLVGPFLPRAAGEEAY 210
BLAST of mRNA_M-pyrifera_M_contig104863.1046.1 vs. uniprot
Match: A0A661EI18_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661EI18_9GAMM) HSP 1 Score: 264 bits (675), Expect = 5.790e-83 Identity = 123/210 (58.57%), Postives = 157/210 (74.76%), Query Frame = 1 Query: 1 VGIKTGQAYTNNLRDGRSLYVNGERVQDVTRYAPYKGIISEISAHFDRFHDPELQPRMTHPSPVNGEPVSNSFLLTRTWEEMLQRVDGESLRKDATYGMMGRLPDFMNAFVTDVAAIPHVLGHRDKAFAENALRYWEYCRDEDICLTHTLVDPKRDYSKGLESQRALKFVRETDSGIVVDGARMLSTLAPVSEELWVGPFMPRKPDEEDY 630 +GI+TG Y +L+D R +++NG V DVT + + GI+ E++ H+DRFH+PE Q T SP +G PVSNS+L +T EM QRV GE+ RK TYGMMGR+PD+MNAFVTD+AAI HVLGH++ FA+NA RY+EY RD DIC THTLVDPK+DY+ L R+++ V + +GIVV GARMLSTLAPVS E++VG FMPR P EEDY Sbjct: 13 MGIRTGAEYIASLKDNRRIFINGGEVNDVTDHPAFSGIVQEVARHYDRFHEPEKQAIYTFSSPADGAPVSNSYLFAQTAGEMAQRVRGETERKADTYGMMGRMPDYMNAFVTDLAAIGHVLGHQEPRFADNAQRYYEYARDSDICFTHTLVDPKKDYTASLGEHRSVRIVEQNSAGIVVSGARMLSTLAPVSNEIFVGAFMPRMPGEEDY 222
BLAST of mRNA_M-pyrifera_M_contig104863.1046.1 vs. uniprot
Match: A0A3D5DGP7_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DGP7_9GAMM) HSP 1 Score: 241 bits (614), Expect = 5.540e-74 Identity = 109/210 (51.90%), Postives = 154/210 (73.33%), Query Frame = 1 Query: 1 VGIKTGQAYTNNLRDGRSLYVNGERVQDVTRYAPYKGIISEISAHFDRFHDPELQPRMTHPSPVNGEPVSNSFLLTRTWEEMLQRVDGESLRKDATYGMMGRLPDFMNAFVTDVAAIPHVLGHRDKAFAENALRYWEYCRDEDICLTHTLVDPKRDYSKGLESQRALKFVRETDSGIVVDGARMLSTLAPVSEELWVGPFMPRKPDEEDY 630 +GI+TG+ Y + LRD R ++VNG + DVT Y ++ + E++ +D HDP + +T+ SP +G+PVS SF++ +T +E+ RV GESLR D TYG+MGRLPD+MNAF TD AAI ++LGHR +F ENA+ YW++ RD D+ LTH LVDP D SKG+E+ +A+ V ET +G+VV+G +MLSTLAP+S+E++V P+MPRK EE Y Sbjct: 1 MGIRTGREYISGLRDERQIFVNGNLISDVTDYPAFRRGVEELARVYDHQHDPAYKTILTYASPSDGKPVSTSFMMAKTMDELNLRVRGESLRADLTYGLMGRLPDYMNAFATDCAAIAYLLGHRQASFGENAINYWQHVRDNDLALTHVLVDPHIDKSKGVEASKAMHVVEETSAGLVVEGCKMLSTLAPLSDEVYVAPYMPRKTGEEKY 210
BLAST of mRNA_M-pyrifera_M_contig104863.1046.1 vs. uniprot
Match: A0A7Y4X322_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4X322_9DELT) HSP 1 Score: 233 bits (593), Expect = 3.710e-71 Identity = 112/214 (52.34%), Postives = 150/214 (70.09%), Query Frame = 1 Query: 1 VGIKTGQAYTNNLRDGRSLYVNGERVQDVTRYAPYKGIISEISAHFDRFHDPELQPRMTHPSPVNGEPVSNSFLLTRTWEEMLQRVDGESLRKDATYGMMGRLPDFMNAFVTDVAAIPHVLGHRDKAFAENALRYWEYCRDEDICLTHTLVDPKRDYSKGLESQR----ALKFVRETDSGIVVDGARMLSTLAPVSEELWVGPFMPRKPDEEDY 630 +GI+TG + +LRD R +YVNGER+ DVT Y P++GI++ +++ +D H E + +T PSP +G PV+ SFL + ++ QR+ E +R + T+G+MGRLPDF NA+VTD+A LG RD F NA+RYWE CRD D+CLTHTL DP+ D SKG Q L+ VRETDSG++V GA+MLSTLAP + EL++GPFMPR P EEDY Sbjct: 1 MGIRTGSEFIESLRDERVVYVNGERLTDVTTYPPFQGILATLASLYDLNH--ERRAELTFPSPADGAPVALSFLKAASLAQVEQRLRAEEIRAEYTFGLMGRLPDFCNAYVTDLAVAAEYLGQRDPRFGHNAIRYWEQCRDSDLCLTHTLADPQIDRSKGPAEQSDPFLTLRVVRETDSGVIVRGAKMLSTLAPFANELYLGPFMPRSPGEEDY 212
BLAST of mRNA_M-pyrifera_M_contig104863.1046.1 vs. uniprot
Match: A0A1Y0BPF8_9BACT (L690 n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1Y0BPF8_9BACT) HSP 1 Score: 225 bits (573), Expect = 3.600e-68 Identity = 111/214 (51.87%), Postives = 147/214 (68.69%), Query Frame = 1 Query: 1 VGIKTGQAYTNNLRDGRSLYVNGERVQDVTRYAPYKGIISEISAHFDRFHDPELQPRMTHPSPVNGEPVSNSFLLTRTWEEMLQRVDGESLRKDATYGMMGRLPDFMNAFVTDVAAIPHVLGHRDKAFAENALRYWEYCRDEDICLTHTLVDPKRDYSKGLESQR----ALKFVRETDSGIVVDGARMLSTLAPVSEELWVGPFMPRKPDEEDY 630 +GI+TG A+ +LRD R +YVNGER+ DVT Y P++G+++ ++A +D H E + +T SP +G PV+ SFL E+ QR+ E +R + T+G+MGRLPDF N +VTD+AA LG R+ F +NALRYW CRD D+CLTHTL DP+ D SKG Q L+ RETD G+VV GA+MLSTLAP + EL++GPFMPR P EEDY Sbjct: 1 MGIRTGSAFIESLRDERVVYVNGERLTDVTTYPPFQGVLATLAALYDLNH--ERRAELTFASPADGAPVALSFLKATALAEVEQRLRAEEIRAEFTFGLMGRLPDFCNGYVTDLAAAADYLGQREPRFGQNALRYWADCRDRDLCLTHTLADPQIDRSKGPAEQSDPFLTLRVERETDRGVVVRGAKMLSTLAPFANELFLGPFMPRAPGEEDY 212 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104863.1046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104863.1046.1 >prot_M-pyrifera_M_contig104863.1046.1 ID=prot_M-pyrifera_M_contig104863.1046.1|Name=mRNA_M-pyrifera_M_contig104863.1046.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp VGIKTGQAYTNNLRDGRSLYVNGERVQDVTRYAPYKGIISEISAHFDRFHback to top mRNA from alignment at M-pyrifera_M_contig104863:2..631- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104863.1046.1 ID=mRNA_M-pyrifera_M_contig104863.1046.1|Name=mRNA_M-pyrifera_M_contig104863.1046.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig104863:2..631- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104863:2..631- >mRNA_M-pyrifera_M_contig104863.1046.1 ID=mRNA_M-pyrifera_M_contig104863.1046.1|Name=mRNA_M-pyrifera_M_contig104863.1046.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig104863:2..631- (Macrocystis pyrifera P11B4 male)back to top |