mRNA_M-pyrifera_M_contig104856.1043.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104856.1043.1 vs. uniprot
Match: UPI0019D6848F (transcription factor GTE9-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D6848F) HSP 1 Score: 96.3 bits (238), Expect = 1.330e-20 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 40 NELRTCQRITRKLLNLDSNRFFAQPVDPVRDMCADYFEVIKQPMDLGTIERKLGKDVYDSADSWHADALLVFSNACIYNREGHFVYEEAKRLNTILTQEWDQMLR 354 +++R C I RKL++ F QPVDPV DYF+VI+ PMDLGT+++KLG Y S D + AD L FSNA YN G+ V+E AK LN I EW+ + R Sbjct: 61 SKIRLCGNILRKLMDHKGGWLFNQPVDPVLFKIPDYFDVIRHPMDLGTVKKKLGSKQYVSTDEFAADVRLTFSNAMKYNPPGNDVHEIAKELNGIFDSEWEAVER 165
BLAST of mRNA_M-pyrifera_M_contig104856.1043.1 vs. uniprot
Match: A0A1Y1YR21_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YR21_9FUNG) HSP 1 Score: 93.2 bits (230), Expect = 5.860e-19 Identity = 41/103 (39.81%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 40 NELRTCQRITRKLLNLDSNRFFAQPVDPVRDMCADYFEVIKQPMDLGTIERKLGKDVYDSADSWHADALLVFSNACIYNREGHFVYEEAKRLNTILTQEWDQM 348 +E++ C+RI RK++ S +F QPVDP+RD C YF++IK PMDLGT++ KL + Y + + D L+ +N I+N G +VY E + L ++ +EW ++ Sbjct: 920 DEMKICKRIIRKMMAHKSAFYFLQPVDPIRDGCPTYFDLIKHPMDLGTVKAKLDEGGYHNLKEFEDDIRLMLNNCFIFNPIGSYVYNEGQELESVFEKEWSEL 1022
BLAST of mRNA_M-pyrifera_M_contig104856.1043.1 vs. uniprot
Match: A0A835F8D2_9POAL (Bromo domain-containing protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835F8D2_9POAL) HSP 1 Score: 92.8 bits (229), Expect = 6.790e-19 Identity = 49/104 (47.12%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 43 ELRTCQRITRKLLNLDSNRFFAQPVDPVRDMCADYFEVIKQPMDLGTIERKLGKDVYDSADSWHADALLVFSNACIYNREGHFVYEEAKRLNTILTQEWDQMLR 354 ++R C I RKL++ S F PVDPV DYF+VI+ PMDLGT+++KL Y S D + AD L FSNA YN G+ V+E AK LN I EW+ + R Sbjct: 61 KIRLCGNILRKLMDHKSGWLFNTPVDPVLFGIPDYFDVIRHPMDLGTVKKKLTSKQYRSTDEFAADVRLTFSNAMKYNPPGNHVHEIAKELNGIFDSEWESVER 164
BLAST of mRNA_M-pyrifera_M_contig104856.1043.1 vs. uniprot
Match: A0A0A9P3L8_ARUDO (GTE901 n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9P3L8_ARUDO) HSP 1 Score: 90.9 bits (224), Expect = 2.840e-18 Identity = 50/108 (46.30%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 49 RTCQRITRKLLNLDSNRFFAQPVDPVRDMCADYFEVIKQPMDLGTIERKLGKDVYDSADSWHADALLVFSNACIYNREGHFVYEEAKRLNTILTQEWDQMLRERAERD 372 R C I RKL++ S F +PVDPV DYF+VI+ PMDLGT+++KL Y S D + AD L FSNA YN G+ V+ AK LN I EW+ + RE +R+ Sbjct: 63 RLCGNILRKLMDHKSIWLFDKPVDPVLYGIPDYFDVIRNPMDLGTVKKKLSNKQYVSTDEFAADVRLTFSNAMKYNPPGNDVHAIAKELNGIFDSEWESVERECRDRN 170
BLAST of mRNA_M-pyrifera_M_contig104856.1043.1 vs. uniprot
Match: A0A0Q3J3Q1_BRADI (Bromo domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3J3Q1_BRADI) HSP 1 Score: 90.9 bits (224), Expect = 3.180e-18 Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 1 Query: 7 GTRKKLPAAVKNELRTCQRITRKLLNLDSNRFFAQPVDPVRDMCADYFEVIKQPMDLGTIERKLGKDVYDSADSWHADALLVFSNACIYNREGHFVYEEAKRLNTILTQEWDQMLRERAERDR 375 ++ K+ + ++ R C+ + KL+ F +PVDPV DYF+VI+ PMDLGT+++KL Y S D + AD L FSNA YN G+FV+ A++LN I EW L ER RDR Sbjct: 49 SSKNKVESMNASQARQCKNVLEKLMGHTGGWLFHEPVDPVLFGIPDYFDVIRNPMDLGTVKKKLTNKNYPSTDEFAADVRLTFSNAMKYNPPGNFVHTVAEQLNGIFDSEWK--LYERKWRDR 169
BLAST of mRNA_M-pyrifera_M_contig104856.1043.1 vs. uniprot
Match: A0A261Y1L4_9FUNG (Transcription initiation factor TFIID subunit 2 n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y1L4_9FUNG) HSP 1 Score: 90.5 bits (223), Expect = 5.130e-18 Identity = 49/113 (43.36%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 37 KNELRTCQRITRKLLNLDSNRFFAQPVDPVRDMCADYFEVIKQPMDLGTIERKLGKDVYDSADSWHADALLVFSNACIYNREGHFVYEEAKRLNTILTQEW----DQMLRERA 363 K ++ C+ I RKL + F QPVDP+ DYF+VIK PMDLG+I++KL + Y SA+ ++ D LVF+N YN EG +V++E K L I EW DQ +E+A Sbjct: 1309 KEAVKGCRAIIRKLFASKHSLNFQQPVDPIALNIPDYFDVIKNPMDLGSIKQKLDDNRYGSANEFYNDVKLVFNNCYTYNPEGSYVHQEGKTLEAIFESEWQKFQDQQKQEQA 1421
BLAST of mRNA_M-pyrifera_M_contig104856.1043.1 vs. uniprot
Match: A0A8J5T5R5_ZIZPA (Bromo domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5T5R5_ZIZPA) HSP 1 Score: 89.0 bits (219), Expect = 6.470e-18 Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 1 Query: 40 NELRTCQRITRKLLNLDSNRFFAQPVDPVRDMCADYFEVIKQPMDLGTIERKLGKDVYDSADSWHADALLVFSNACIYNREGHFVYEEAKRLNTILTQEWDQMLRERAERDR 375 ++LR C + +KL++ + F +PVDPV DYF+VI+ PMDLGT+++KL Y S D + AD L FSNA YN G+ V+ A +LN + EW L ER RDR Sbjct: 60 SKLRQCGNVLKKLMDHEGGWLFHKPVDPVLYGIPDYFDVIRNPMDLGTVKKKLTNKQYSSTDEFAADVRLTFSNAMKYNPPGNDVHNIADQLNRLFDSEWK--LLERKWRDR 169
BLAST of mRNA_M-pyrifera_M_contig104856.1043.1 vs. uniprot
Match: A0A5J9UTQ3_9POAL (Bromo domain-containing protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UTQ3_9POAL) HSP 1 Score: 89.7 bits (221), Expect = 7.520e-18 Identity = 52/122 (42.62%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 13 RKKLPAAVKNELRTCQRITRKLLNL-DSNRFFAQPVDPVRDMCADYFEVIKQPMDLGTIERKLGKDVYDSADSWHADALLVFSNACIYNREGHFVYEEAKRLNTILTQEWDQMLRERAERDR 375 +KK + ++R C I KL++ D + F PVDPV DYF+VI+ PMDLGT+++KL Y S + + AD L FSNA YN G++V+ AK LN I EW+ + ER RDR Sbjct: 51 KKKTESMDTRKIRLCGNILSKLMDQGDKSLLFLHPVDPVVYGIPDYFDVIRNPMDLGTVKKKLANRQYASTNEFAADVRLTFSNAMTYNPPGNYVHNVAKELNGIFESEWESV--ERKCRDR 170
BLAST of mRNA_M-pyrifera_M_contig104856.1043.1 vs. uniprot
Match: A0A811QCM8_9POAL (Hypothetical protein n=4 Tax=Andropogoneae TaxID=147429 RepID=A0A811QCM8_9POAL) HSP 1 Score: 89.7 bits (221), Expect = 8.100e-18 Identity = 50/111 (45.05%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 28 AAVKNE--LRTCQRITRKLLNLDSNRFFAQPVDPVRDMCADYFEVIKQPMDLGTIERKLGKDVYDSADSWHADALLVFSNACIYNREGHFVYEEAKRLNTILTQEWDQMLR 354 A++KN +R C I RKL++ F PVDPV DYF+VI+ PMDLGT++ KL K Y S + + AD L FSNA YN G+ V+ AK LN I EW+ + R Sbjct: 55 ASMKNSRMIRLCGNIVRKLIDHKGGWLFKDPVDPVLYGIPDYFDVIRNPMDLGTVKNKLTKKKYVSIEEFAADVRLTFSNATKYNPPGNDVHTFAKELNEIFNSEWESVER 165
BLAST of mRNA_M-pyrifera_M_contig104856.1043.1 vs. uniprot
Match: K3ZHV5_SETIT (Bromo domain-containing protein n=2 Tax=Setaria TaxID=4554 RepID=K3ZHV5_SETIT) HSP 1 Score: 89.4 bits (220), Expect = 1.110e-17 Identity = 48/105 (45.71%), Postives = 62/105 (59.05%), Query Frame = 1 Query: 40 NELRTCQRITRKLLNLDSNRFFAQPVDPVRDMCADYFEVIKQPMDLGTIERKLGKDVYDSADSWHADALLVFSNACIYNREGHFVYEEAKRLNTILTQEWDQMLR 354 ++ R C I RKL+ S F +PVDPV DYF+VI+ PMDLGT+++KL Y S D + AD L FSNA YN G+ V+ AK LN I EW+ + R Sbjct: 60 SKTRLCGNILRKLMEHKSGWLFNKPVDPVLYGIPDYFDVIRHPMDLGTVKKKLTNKQYVSTDEFAADVRLTFSNAMKYNPPGNDVHSIAKELNGIFDSEWESVER 164 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104856.1043.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104856.1043.1 >prot_M-pyrifera_M_contig104856.1043.1 ID=prot_M-pyrifera_M_contig104856.1043.1|Name=mRNA_M-pyrifera_M_contig104856.1043.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp MEGTRKKLPAAVKNELRTCQRITRKLLNLDSNRFFAQPVDPVRDMCADYFback to top mRNA from alignment at M-pyrifera_M_contig104856:146..640- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104856.1043.1 ID=mRNA_M-pyrifera_M_contig104856.1043.1|Name=mRNA_M-pyrifera_M_contig104856.1043.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig104856:146..640- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104856:146..640- >mRNA_M-pyrifera_M_contig104856.1043.1 ID=mRNA_M-pyrifera_M_contig104856.1043.1|Name=mRNA_M-pyrifera_M_contig104856.1043.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig104856:146..640- (Macrocystis pyrifera P11B4 male)back to top |