mRNA_M-pyrifera_M_contig104823.1030.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104823.1030.1
Unique NamemRNA_M-pyrifera_M_contig104823.1030.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig104823.1030.1 vs. uniprot
Match: A0A7K7DNR3_PHEME (Pyruvate dehydrogenase E1 component subunit beta (Fragment) n=1 Tax=Pheucticus melanocephalus TaxID=371919 RepID=A0A7K7DNR3_PHEME)

HSP 1 Score: 258 bits (658), Expect = 1.200e-84
Identity = 126/164 (76.83%), Postives = 146/164 (89.02%), Query Frame = 1 
Query:    4 AVGQMNIRDALNSAMDEELERDERVFLLGEEVGQYNGAYKISKGLHAKYGDSRIIDTPITEMGFTGMGVGAAMGGMRPIVEFMTFNFSMQAIDQMINSAGKQLYMSAGTIPCPIVFRGPNGASAGVGAQHSQCFAAWFGSVPGRKVIAPYSAEDARGLLKAAIR 495
            A+ Q+ +RDALN A+DEELERDERVFLLGEEV QY+GAYKIS+GL  KYGD R+IDTPI+EMGFTG+ VGAAM G+RP+ EFMTFNFSMQAIDQ+INSA K  YMSAG+IP PIVFRGPNGASAGV AQHSQCFAAW+G  PG KV++P+S+EDA+GLLKA+IR
Sbjct:   11 ALSQVTVRDALNQALDEELERDERVFLLGEEVAQYDGAYKISRGLWKKYGDKRVIDTPISEMGFTGIAVGAAMAGLRPVCEFMTFNFSMQAIDQVINSAAKTCYMSAGSIPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLLKASIR 174
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BLAST of mRNA_M-pyrifera_M_contig104823.1030.1 vs. uniprot
Match: A0A7L4IEL1_SCOUM (Pyruvate dehydrogenase E1 component subunit beta (Fragment) n=6 Tax=Neognathae TaxID=8825 RepID=A0A7L4IEL1_SCOUM)

HSP 1 Score: 254 bits (648), Expect = 4.560e-84
Identity = 124/163 (76.07%), Postives = 144/163 (88.34%), Query Frame = 1 
Query:    7 VGQMNIRDALNSAMDEELERDERVFLLGEEVGQYNGAYKISKGLHAKYGDSRIIDTPITEMGFTGMGVGAAMGGMRPIVEFMTFNFSMQAIDQMINSAGKQLYMSAGTIPCPIVFRGPNGASAGVGAQHSQCFAAWFGSVPGRKVIAPYSAEDARGLLKAAIR 495
            V Q+ +RDALN A+DEELERDERVFLLGEEV QY+GAYK+S+GL  KYGD R+IDTPI+EMGFTG+ VGAAM G+RP+ EFMTFNFSMQAIDQ+INSA K  YMSAG+I  PIVFRGPNGASAGV AQHSQCFAAW+G  PG KV++P+S+EDA+GLLKA+IR
Sbjct:   16 VSQVTVRDALNQALDEELERDERVFLLGEEVAQYDGAYKVSRGLWKKYGDKRVIDTPISEMGFTGIAVGAAMAGLRPVCEFMTFNFSMQAIDQVINSAAKTCYMSAGSIAVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLLKASIR 178
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BLAST of mRNA_M-pyrifera_M_contig104823.1030.1 vs. uniprot
Match: A0A7L2KW77_9PASS (Pyruvate dehydrogenase E1 component subunit beta (Fragment) n=98 Tax=Aves TaxID=8782 RepID=A0A7L2KW77_9PASS)

HSP 1 Score: 259 bits (662), Expect = 6.960e-84
Identity = 127/164 (77.44%), Postives = 146/164 (89.02%), Query Frame = 1 
Query:    4 AVGQMNIRDALNSAMDEELERDERVFLLGEEVGQYNGAYKISKGLHAKYGDSRIIDTPITEMGFTGMGVGAAMGGMRPIVEFMTFNFSMQAIDQMINSAGKQLYMSAGTIPCPIVFRGPNGASAGVGAQHSQCFAAWFGSVPGRKVIAPYSAEDARGLLKAAIR 495
            AV Q+ +RDALN A+DEELERDERVFLLGEEV QY+GAYKIS+GL  KYGD R+IDTPI+EMGF G+ VGAAM G+RP+ EFMTFNFSMQAIDQ+INSA K  YMSAG+IP PIVFRGPNGA+AGVGAQHSQCFAAW+G  PG KV++P+S+EDA+GLLKAAIR
Sbjct:   16 AVSQVTVRDALNQALDEELERDERVFLLGEEVAQYDGAYKISRGLWKKYGDKRVIDTPISEMGFAGIAVGAAMAGLRPVCEFMTFNFSMQAIDQVINSAAKTCYMSAGSIPVPIVFRGPNGAAAGVGAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLLKAAIR 179
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BLAST of mRNA_M-pyrifera_M_contig104823.1030.1 vs. uniprot
Match: A0A6I9HFL8_GEOFO (Pyruvate dehydrogenase E1 component subunit beta n=159 Tax=Archelosauria TaxID=1329799 RepID=A0A6I9HFL8_GEOFO)

HSP 1 Score: 259 bits (661), Expect = 8.720e-84
Identity = 127/164 (77.44%), Postives = 146/164 (89.02%), Query Frame = 1 
Query:    4 AVGQMNIRDALNSAMDEELERDERVFLLGEEVGQYNGAYKISKGLHAKYGDSRIIDTPITEMGFTGMGVGAAMGGMRPIVEFMTFNFSMQAIDQMINSAGKQLYMSAGTIPCPIVFRGPNGASAGVGAQHSQCFAAWFGSVPGRKVIAPYSAEDARGLLKAAIR 495
            AV Q+ +RDALN A+DEELERDERVFLLGEEV QY+GAYKIS+GL  KYGD R+IDTPI+EMGFTG+ VGAAM G+RP+ EFMTFNFSMQAIDQ+INSA K  YMSAG+IP PIVFRGPNGASAGV AQHSQCFAAW+G  PG KV++P+S+EDA+GLLKA+IR
Sbjct:   12 AVSQVTVRDALNQALDEELERDERVFLLGEEVAQYDGAYKISRGLWKKYGDKRVIDTPISEMGFTGIAVGAAMAGLRPVCEFMTFNFSMQAIDQVINSAAKTCYMSAGSIPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLLKASIR 175
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BLAST of mRNA_M-pyrifera_M_contig104823.1030.1 vs. uniprot
Match: A0A452HRL5_9SAUR (Pyruvate dehydrogenase E1 component subunit beta n=17 Tax=Durocryptodira TaxID=1579337 RepID=A0A452HRL5_9SAUR)

HSP 1 Score: 261 bits (668), Expect = 1.570e-83
Identity = 128/164 (78.05%), Postives = 147/164 (89.63%), Query Frame = 1 
Query:    4 AVGQMNIRDALNSAMDEELERDERVFLLGEEVGQYNGAYKISKGLHAKYGDSRIIDTPITEMGFTGMGVGAAMGGMRPIVEFMTFNFSMQAIDQMINSAGKQLYMSAGTIPCPIVFRGPNGASAGVGAQHSQCFAAWFGSVPGRKVIAPYSAEDARGLLKAAIR 495
            A  Q+N+RDALN A+DEELERDERVFLLGEEV QY+GAYKIS+GL  KYGD RIIDTPI+EMGFTG+ VGAAM G+RPI EFMTFNFSMQAIDQ+INSA K LYMSAG +P P+VFRGPNGASAGVGAQHSQCFAAW+G  PG KV++P+S+EDA+GLLKA++R
Sbjct:  115 AAVQVNVRDALNQALDEELERDERVFLLGEEVAQYDGAYKISRGLWKKYGDKRIIDTPISEMGFTGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSASKTLYMSAGMVPVPVVFRGPNGASAGVGAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLLKASVR 278
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BLAST of mRNA_M-pyrifera_M_contig104823.1030.1 vs. uniprot
Match: UPI0019017449 (pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like n=1 Tax=Salvelinus namaycush TaxID=8040 RepID=UPI0019017449)

HSP 1 Score: 255 bits (652), Expect = 2.020e-83
Identity = 129/164 (78.66%), Postives = 142/164 (86.59%), Query Frame = 1 
Query:    4 AVGQMNIRDALNSAMDEELERDERVFLLGEEVGQYNGAYKISKGLHAKYGDSRIIDTPITEMGFTGMGVGAAMGGMRPIVEFMTFNFSMQAIDQMINSAGKQLYMSAGTIPCPIVFRGPNGASAGVGAQHSQCFAAWFGSVPGRKVIAPYSAEDARGLLKAAIR 495
            A  Q+N+RDALN AMDEELERDERVFLLGEEV QY+GAYK+S+GL  KYGD RIIDTPITEMGF G+ VGAA  G+RPI EFMT+NFSMQAIDQ+INSA K  YMSAG  P PIVFRGPNG+SAGV AQHSQCFAAW+G  PG KVI+P+SAEDARGLLKAAIR
Sbjct:   29 AAVQVNVRDALNQAMDEELERDERVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPITEMGFAGIAVGAAFAGLRPICEFMTWNFSMQAIDQVINSAAKTYYMSAGAQPVPIVFRGPNGSSAGVAAQHSQCFAAWYGHCPGLKVISPWSAEDARGLLKAAIR 192
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BLAST of mRNA_M-pyrifera_M_contig104823.1030.1 vs. uniprot
Match: R7Q9G6_CHOCR (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9G6_CHOCR)

HSP 1 Score: 258 bits (659), Expect = 3.220e-83
Identity = 124/165 (75.15%), Postives = 144/165 (87.27%), Query Frame = 1 
Query:    1 LAVGQMNIRDALNSAMDEELERDERVFLLGEEVGQYNGAYKISKGLHAKYGDSRIIDTPITEMGFTGMGVGAAMGGMRPIVEFMTFNFSMQAIDQMINSAGKQLYMSAGTIPCPIVFRGPNGASAGVGAQHSQCFAAWFGSVPGRKVIAPYSAEDARGLLKAAIR 495
            LA   M +R+ALN+A+DEELERD+RVF++GEEV +Y+GAYK++KGLHAKYGD R++DTPITE GF G+  GAAMGG+RPI EFMTFNFSMQAID ++NSA K LYMS G I  PIVFRGPNGASAGVGAQHSQCFAAW+GSVPG KVI+PY  EDARGLLK+AIR
Sbjct:   24 LAPASMTVREALNTAIDEELERDDRVFVIGEEVAEYDGAYKVTKGLHAKYGDQRVVDTPITEAGFAGLATGAAMGGLRPIAEFMTFNFSMQAIDHIVNSAAKTLYMSGGQIQVPIVFRGPNGASAGVGAQHSQCFAAWYGSVPGLKVISPYDVEDARGLLKSAIR 188
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BLAST of mRNA_M-pyrifera_M_contig104823.1030.1 vs. uniprot
Match: A0A1D5P1U2_CHICK (Pyruvate dehydrogenase E1 component subunit beta n=61 Tax=Aves TaxID=8782 RepID=A0A1D5P1U2_CHICK)

HSP 1 Score: 258 bits (658), Expect = 4.160e-83
Identity = 127/161 (78.88%), Postives = 144/161 (89.44%), Query Frame = 1 
Query:   13 QMNIRDALNSAMDEELERDERVFLLGEEVGQYNGAYKISKGLHAKYGDSRIIDTPITEMGFTGMGVGAAMGGMRPIVEFMTFNFSMQAIDQMINSAGKQLYMSAGTIPCPIVFRGPNGASAGVGAQHSQCFAAWFGSVPGRKVIAPYSAEDARGLLKAAIR 495
            Q+ +RDALN A+DEELERDERVFLLGEEV QY+GAYKIS+GL  KYGD RIIDTPI+EMGFTG+ VGAAM G+RP+ EFMTFNFSMQAIDQ+INSA K  YMSAGTIP PIVFRGPNGASAGV AQHSQCFAAW+G  PG KV++P+S+EDA+GLLKA+IR
Sbjct:   32 QVTVRDALNQALDEELERDERVFLLGEEVAQYDGAYKISRGLWKKYGDKRIIDTPISEMGFTGIAVGAAMAGLRPVCEFMTFNFSMQAIDQVINSAAKTCYMSAGTIPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLLKASIR 192
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BLAST of mRNA_M-pyrifera_M_contig104823.1030.1 vs. uniprot
Match: A0A8C5AED5_GADMO (Pyruvate dehydrogenase E1 component subunit beta n=3 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5AED5_GADMO)

HSP 1 Score: 258 bits (659), Expect = 4.750e-83
Identity = 131/161 (81.37%), Postives = 143/161 (88.82%), Query Frame = 1 
Query:   13 QMNIRDALNSAMDEELERDERVFLLGEEVGQYNGAYKISKGLHAKYGDSRIIDTPITEMGFTGMGVGAAMGGMRPIVEFMTFNFSMQAIDQMINSAGKQLYMSAGTIPCPIVFRGPNGASAGVGAQHSQCFAAWFGSVPGRKVIAPYSAEDARGLLKAAIR 495
            Q+ +RDALN AMDEELERDERVFLLGEEV QY+GAYKIS+GL  KYGD+RIIDTPITEMGFTG+ VGAAM G+RPI EFMTFNFSMQAIDQ+INSA K  YMSAG    PIVFRGPNGASAGVGAQHSQCFAAW+G  PG KV++P+SAEDARGLLKAAIR
Sbjct:   28 QVTVRDALNQAMDEELERDERVFLLGEEVAQYDGAYKISRGLWKKYGDARIIDTPITEMGFTGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTNYMSAGRQSVPIVFRGPNGASAGVGAQHSQCFAAWYGHCPGLKVVSPWSAEDARGLLKAAIR 188
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BLAST of mRNA_M-pyrifera_M_contig104823.1030.1 vs. uniprot
Match: A0A7M4G210_CROPO (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Crocodylus porosus TaxID=8502 RepID=A0A7M4G210_CROPO)

HSP 1 Score: 253 bits (646), Expect = 5.970e-83
Identity = 125/164 (76.22%), Postives = 143/164 (87.20%), Query Frame = 1 
Query:    4 AVGQMNIRDALNSAMDEELERDERVFLLGEEVGQYNGAYKISKGLHAKYGDSRIIDTPITEMGFTGMGVGAAMGGMRPIVEFMTFNFSMQAIDQMINSAGKQLYMSAGTIPCPIVFRGPNGASAGVGAQHSQCFAAWFGSVPGRKVIAPYSAEDARGLLKAAIR 495
            A  Q+ +RDALN A+DEELERDERVFLLGEEV QY+GAYKIS+GL  KYGD RIIDTPI+EMGFTG+ VGAAM G+RPI EFMTFNFSMQAIDQ+INSA K  YMS+G +  P+VFRGPNG SAGVGAQHSQCFAAW+G  PG KV++P+S+EDARGLLK+AIR
Sbjct:   30 AAVQVTVRDALNQALDEELERDERVFLLGEEVAQYDGAYKISRGLWKKYGDKRIIDTPISEMGFTGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSSGMVSVPVVFRGPNGTSAGVGAQHSQCFAAWYGHCPGLKVVSPWSSEDARGLLKSAIR 193
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104823.1030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K7DNR3_PHEME1.200e-8476.83Pyruvate dehydrogenase E1 component subunit beta (... [more]
A0A7L4IEL1_SCOUM4.560e-8476.07Pyruvate dehydrogenase E1 component subunit beta (... [more]
A0A7L2KW77_9PASS6.960e-8477.44Pyruvate dehydrogenase E1 component subunit beta (... [more]
A0A6I9HFL8_GEOFO8.720e-8477.44Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A452HRL5_9SAUR1.570e-8378.05Pyruvate dehydrogenase E1 component subunit beta n... [more]
UPI00190174492.020e-8378.66pyruvate dehydrogenase E1 component subunit beta, ... [more]
R7Q9G6_CHOCR3.220e-8375.15Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A1D5P1U2_CHICK4.160e-8378.88Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A8C5AED5_GADMO4.750e-8381.37Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7M4G210_CROPO5.970e-8376.22Pyruvate dehydrogenase E1 component subunit beta n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104823contigM-pyrifera_M_contig104823:62..640 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score263.8
Seed ortholog evalue5e-68
Seed eggNOG ortholog8479.XP_005296011.1
Preferred namePDHB
KEGG rclassRC00003,RC00004,RC00027,RC00060,RC00181,RC00496,RC00627,RC02742,RC02744,RC02882
KEGG koko:K00162,ko:K09189
KEGG ReactionR00014,R00209,R01699,R03270,R03875,R03938,R04866,R04867
KEGG Pathwayko00010,ko00020,ko00310,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00310,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230
KEGG ModuleM00307
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004738,GO:0004739,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006091,GO:0006099,GO:0006101,GO:0006139,GO:0006163,GO:0006164,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009060,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015980,GO:0016491,GO:0016624,GO:0016903,GO:0016999,GO:0017144,GO:0018130,GO:0019362,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045254,GO:0045333,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072350,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204
EggNOG free text desc.Pyruvate dehydrogenase (lipoamide) beta
EggNOG OGs38C5V@33154,3BH2J@33208,3CRDB@33213,482T0@7711,48ZKK@7742,4CG9I@8459,COG0022@1,KOG0524@2759
EC1.2.4.1,2.1.1.43
COG Functional cat.C
Best tax levelTestudines
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000,ko03000,ko03036
Exons2
Model size495
Cds size480
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104823.1030.1prot_M-pyrifera_M_contig104823.1030.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104823 77..640 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815555.6965165-UTR-M-pyrifera_M_contig104823:61..761622815555.6965165-UTR-M-pyrifera_M_contig104823:61..76Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104823 62..76 +
1692277461.9598086-UTR-M-pyrifera_M_contig104823:61..761692277461.9598086-UTR-M-pyrifera_M_contig104823:61..76Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104823 62..76 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815555.7111135-CDS-M-pyrifera_M_contig104823:76..1841622815555.7111135-CDS-M-pyrifera_M_contig104823:76..184Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104823 77..184 +
1692277461.969698-CDS-M-pyrifera_M_contig104823:76..1841692277461.969698-CDS-M-pyrifera_M_contig104823:76..184Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104823 77..184 +
1622815555.722331-CDS-M-pyrifera_M_contig104823:268..6401622815555.722331-CDS-M-pyrifera_M_contig104823:268..640Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104823 269..640 +
1692277461.9789612-CDS-M-pyrifera_M_contig104823:268..6401692277461.9789612-CDS-M-pyrifera_M_contig104823:268..640Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104823 269..640 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104823.1030.1

>prot_M-pyrifera_M_contig104823.1030.1 ID=prot_M-pyrifera_M_contig104823.1030.1|Name=mRNA_M-pyrifera_M_contig104823.1030.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=160bp
MNIRDALNSAMDEELERDERVFLLGEEVGQYNGAYKISKGLHAKYGDSRI
IDTPITEMGFTGMGVGAAMGGMRPIVEFMTFNFSMQAIDQMINSAGKQLY
MSAGTIPCPIVFRGPNGASAGVGAQHSQCFAAWFGSVPGRKVIAPYSAED
ARGLLKAAIR
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mRNA from alignment at M-pyrifera_M_contig104823:62..640+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104823.1030.1 ID=mRNA_M-pyrifera_M_contig104823.1030.1|Name=mRNA_M-pyrifera_M_contig104823.1030.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=579bp|location=Sequence derived from alignment at M-pyrifera_M_contig104823:62..640+ (Macrocystis pyrifera P11B4 male)
CTCGCTGTGGGGCAGATGAACATTCGTGATGCGCTGAACTCGGCGATGGA
CGAGGAGTTGGAGCGCGACGAGCGCGTGTTCCTGCTGGGAGAGGAGGTTG
GCCAGTACAACGGCGCGTACAAGGTGAGGGGGAGCGATGTGCTCCTCGCT
TCTTGCGCCGTGCTGACTCTGTGTGACGCGCTCGCCTGCGTCTGTGCCCG
CCTGCAGATTAGCAAGGGTCTGCACGCCAAGTACGGCGACAGCCGCATCA
TCGACACACCTATCACGGAGATGGGCTTCACCGGGATGGGCGTGGGCGCC
GCTATGGGCGGCATGCGGCCCATCGTGGAGTTCATGACCTTCAACTTCAG
CATGCAGGCGATCGACCAGATGATCAACTCCGCGGGGAAGCAGCTGTACA
TGTCCGCCGGCACCATCCCGTGCCCCATCGTGTTCCGCGGGCCCAACGGC
GCGTCCGCAGGCGTGGGCGCGCAGCACTCGCAGTGCTTCGCGGCCTGGTT
CGGCTCCGTGCCCGGCCGCAAGGTCATCGCCCCCTACTCCGCCGAGGACG
CCCGGGGCCTGCTCAAGGCCGCCATCCGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104823:62..640+

>mRNA_M-pyrifera_M_contig104823.1030.1 ID=mRNA_M-pyrifera_M_contig104823.1030.1|Name=mRNA_M-pyrifera_M_contig104823.1030.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=960bp|location=Sequence derived from alignment at M-pyrifera_M_contig104823:62..640+ (Macrocystis pyrifera P11B4 male)
ATGAACATTCGTGATGCGCTGAACTCGGCGATGGACGAGGAGTTGGAGCG
CGACGAGCGCGTGTTCCTGCTGGGAGAGGAGGTTGGCCAGTACAACGGCG
CGTACAAGATGAACATTCGTGATGCGCTGAACTCGGCGATGGACGAGGAG
TTGGAGCGCGACGAGCGCGTGTTCCTGCTGGGAGAGGAGGTTGGCCAGTA
CAACGGCGCGTACAAGATTAGCAAGGGTCTGCACGCCAAGTACGGCGACA
GCCGCATCATCGACACACCTATCACGGAGATGGGCTTCACCGGGATGGGC
GTGGGCGCCGCTATGGGCGGCATGCGGCCCATCGTGGAGTTCATGACCTT
CAACTTCAGCATGCAGGCGATCGACCAGATGATCAACTCCGCGGGGAAGC
AGCTGTACATGTCCGCCGGCACCATCCCGTGCCCCATCGTGTTCCGCGGG
CCCAACGGCGCGTCCGCAGGCGTGGGCGCGCAGCACTCGCAGTGCTTCGC
GGCCTGGTTCGGCTCCGTGCCCGGCCGCAAGGTCATCGCCCCCTACTCCG
CCGAGGACGCCCGGGGCCTGCTCAAGGCCGCCATCCGCATTAGCAAGGGT
CTGCACGCCAAGTACGGCGACAGCCGCATCATCGACACACCTATCACGGA
GATGGGCTTCACCGGGATGGGCGTGGGCGCCGCTATGGGCGGCATGCGGC
CCATCGTGGAGTTCATGACCTTCAACTTCAGCATGCAGGCGATCGACCAG
ATGATCAACTCCGCGGGGAAGCAGCTGTACATGTCCGCCGGCACCATCCC
GTGCCCCATCGTGTTCCGCGGGCCCAACGGCGCGTCCGCAGGCGTGGGCG
CGCAGCACTCGCAGTGCTTCGCGGCCTGGTTCGGCTCCGTGCCCGGCCGC
AAGGTCATCGCCCCCTACTCCGCCGAGGACGCCCGGGGCCTGCTCAAGGC
CGCCATCCGC
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