mRNA_M-pyrifera_M_contig104815.1026.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104815.1026.1 vs. uniprot
Match: UPI00145ADEF1 (peroxisomal sarcosine oxidase n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=UPI00145ADEF1) HSP 1 Score: 98.6 bits (244), Expect = 2.200e-21 Identity = 49/113 (43.36%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 64 HLYSTPAFEYPGLIKAGAHGEYPKEYGHFTTASERSFAYNKRLLARVQADVARHLPLADPEPVSSETCLYTVTRESHFLLDVLPNHPRVVVGGGGSGHAFKHGPILGEILADL 402 H+Y P+ EYPGL+K H P + H ++RS + +L R V+R +P +PEP E+C+YT+T + HF+LDV P H +V+G G SGH FK GPI+G+IL +L Sbjct: 257 HIYGLPSNEYPGLVKICLHTGSPTDPDHRDRQTDRS---DVDILRRY---VSRSIPGLEPEPAIVESCMYTMTPDDHFVLDVHPQHRNIVIGAGFSGHGFKFGPIIGKILCEL 363
BLAST of mRNA_M-pyrifera_M_contig104815.1026.1 vs. uniprot
Match: H2MF46_ORYLA (Sarcosine oxidase n=5 Tax=Oryzias latipes TaxID=8090 RepID=H2MF46_ORYLA) HSP 1 Score: 95.9 bits (237), Expect = 2.130e-20 Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 7 RNFPVLIEYANDRPLHEAGHLYSTPAFEYPGLIKAGAHGEYPKEYGHFTTASERSFAYNKRLLARVQADVARHLPLADPEPVSSETCLYTVTRESHFLLDVLPNHPRVVVGGGGSGHAFKHGPILGEILADL 402 + FP ++ ++ H+Y PA EYPG++K H P + +RS + +Q V+R P PEP E+CLYTVT ++HF+LD P + +V+G G SGH FK GPI+G+IL DL Sbjct: 240 QKFPCFLQIEGEKSKE---HIYGLPANEYPGMVKICLHAGSPADPDQRDQQKDRSD------IETLQRFVSRRFPGLVPEPAVVESCLYTVTPDNHFVLDYHPAYRNIVIGAGFSGHGFKFGPIVGQILCDL 362
BLAST of mRNA_M-pyrifera_M_contig104815.1026.1 vs. uniprot
Match: A0A6J2VNQ2_CHACN (Sarcosine oxidase n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VNQ2_CHACN) HSP 1 Score: 94.0 bits (232), Expect = 1.060e-19 Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 1 Query: 7 RNFPVLIEYANDRPLHEAGHLYSTPAFEYPGLIKAGAHGEYPKEYGHFTTASERSFAYNKRLLARVQADVARHLPLADPEPVSSETCLYTVTRESHFLLDVLPNHPRVVVGGGGSGHAFKHGPILGEILADL 402 R FP ++ + H H+Y P+ EYPGL+K H G T R +K + + +AR P +P P ETCLYT T ++HF+LD P H +++G G SGH FK GP++G+IL +L Sbjct: 238 RRFPCFVQVESKESKH---HIYGFPSNEYPGLMKVCYHA------GSETNPDFRDKQTDKTDIDIISRYIARCFPALEPIPAVVETCLYTNTPDTHFVLDRHPTHSNIIIGAGFSGHGFKFGPLIGKILYEL 360
BLAST of mRNA_M-pyrifera_M_contig104815.1026.1 vs. uniprot
Match: H2RK59_TAKRU (Sarcosine oxidase n=3 Tax=Takifugu TaxID=31032 RepID=H2RK59_TAKRU) HSP 1 Score: 93.6 bits (231), Expect = 1.500e-19 Identity = 54/131 (41.22%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 13 FPVLIEYANDRPLHEAGHLYSTPAFEYPGLIKAGAH-GEYPKEYGHFTTASERSFAYNKRLLARVQADVARHLPLADPEPVSSETCLYTVTRESHFLLDVLPNHPRVVVGGGGSGHAFKHGPILGEILADL 402 FP I + H H+Y P+ EYPGL+K H G ASE KR +ARV LP PEP ETC+YT+T +SHF+LD P H +V+G G SGH FK GP++G++L +L Sbjct: 242 FPCFILTEGEESEH---HIYGLPSHEYPGLVKVCNHLGVRTDPDQRDRDASEWDVEVLKRFVARV-------LPGLVPEPAVVETCMYTMTPDSHFVLDRHPAHSNIVIGAGFSGHGFKFGPLIGKLLCEL 362
BLAST of mRNA_M-pyrifera_M_contig104815.1026.1 vs. uniprot
Match: A0A1S3T1N6_SALSA (Sarcosine oxidase n=19 Tax=Salmonidae TaxID=8015 RepID=A0A1S3T1N6_SALSA) HSP 1 Score: 92.8 bits (229), Expect = 2.810e-19 Identity = 49/130 (37.69%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 13 FPVLIEYANDRPLHEAGHLYSTPAFEYPGLIKAGAHGEYPKEYGHFTTASERSFAYNKRLLARVQADVARHLPLADPEPVSSETCLYTVTRESHFLLDVLPNHPRVVVGGGGSGHAFKHGPILGEILADL 402 FP I+ ++ H H+Y P+ EYPGL+K H G T ER ++ + +Q + R P P P E+C+YTVT ++HF+LD+ P H +V+G G SGH FK GPI+G++L +L Sbjct: 240 FPCFIQLESEEAKH---HIYGLPSNEYPGLMKICYHT------GAETDPDERDRQTDRGDIDILQRYITRCFPGLVPIPAVVESCMYTVTPDNHFVLDLHPTHSNIVIGAGFSGHGFKFGPIVGKLLCEL 360
BLAST of mRNA_M-pyrifera_M_contig104815.1026.1 vs. uniprot
Match: A0A3P8V3M5_CYNSE (Sarcosine oxidase n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8V3M5_CYNSE) HSP 1 Score: 92.8 bits (229), Expect = 2.810e-19 Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 7 RNFPVLIEYANDRPLHEAGHLYSTPAFEYPGLIKAGAHGEYPKEYGHFTTASERSFAYNKRLLARVQADVARHLPLADPEPVSSETCLYTVTRESHFLLDVLPNHPRVVVGGGGSGHAFKHGPILGEILADL 402 + FP ++ + + H+Y P+ EYPGL+K H P + ++RS + +L R + R +P PEP E+C+YTVT +SHF+LD P H +V+G G SGH FK GPI+G++L++L Sbjct: 238 KRFPSFLQLDSKETMD---HIYGLPSQEYPGLMKICLHTGSPTDPDQRDKQTDRS---DIDILRRY---ITRCIPGLHPEPAVVESCMYTVTPDSHFVLDCHPEHRNIVIGAGFSGHGFKFGPIIGKLLSEL 360
BLAST of mRNA_M-pyrifera_M_contig104815.1026.1 vs. uniprot
Match: A0A3B3BR88_ORYME (Sarcosine oxidase n=2 Tax=Oryzias TaxID=8089 RepID=A0A3B3BR88_ORYME) HSP 1 Score: 92.8 bits (229), Expect = 2.860e-19 Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 7 RNFPVLIEYANDRPLHEAGHLYSTPAFEYPGLIKAGAHGEYPKEYGHFTTASERSFAYNKRLLARVQADVARHLPLADPEPVSSETCLYTVTRESHFLLDVLPNHPRVVVGGGGSGHAFKHGPILGEILADL 402 ++FP ++ + + H+Y PA EYPG++K H G T +R ++ + +Q V+R P EP E+CLYTVT + HF+LD P + +V+G G SGH FK GP++G+IL DL Sbjct: 240 QSFPCFLQTEGEE---SSDHIYGLPANEYPGMVKICLHA------GSNTDPDQRDQQTDRSDIETLQRFVSRRFPGLFSEPAVVESCLYTVTPDDHFVLDHHPAYRNIVIGAGFSGHGFKFGPVVGQILCDL 362
BLAST of mRNA_M-pyrifera_M_contig104815.1026.1 vs. uniprot
Match: A0A6P8HQH0_ACTTE (Sarcosine oxidase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HQH0_ACTTE) HSP 1 Score: 92.4 bits (228), Expect = 4.050e-19 Identity = 49/145 (33.79%), Postives = 73/145 (50.34%), Query Frame = 1 Query: 13 FPVLIEYANDRPLHEAGHLYSTPAFEYPGLIKAGAHGEYPKEYGHFTTASERSFAYNKRLLARVQADVARHLPLADPEPVSSETCLYTVTRESHFLLDVLPNHPRVVVGGGGSGHAFKHGPILGEILADLCFTGKSDWENEVYKL 447 FP I Y D H+Y P FE+PGLIK HG P S +++ + + +++ DP P +TC+YTVT +S F+LD P+H +V+G G SGH FK P++G+IL L + +E +K+ Sbjct: 241 FPGFILYLEDLDGLGHEHVYGFPVFEFPGLIKICHHGGVPVS----GPQSRDDMRKDEKYIDKTSKCISKRFVGIDPNPKIVDTCMYTVTPDSSFVLDYHPSHSNIVIGAGFSGHGFKMAPLVGKILYQLALGERPSYEMGPFKI 381
BLAST of mRNA_M-pyrifera_M_contig104815.1026.1 vs. uniprot
Match: V4XYL1_9ARCH (FAD dependent oxidoreductase (Fragment) n=1 Tax=uncultured archaeon A07HB70 TaxID=1412872 RepID=V4XYL1_9ARCH) HSP 1 Score: 89.7 bits (221), Expect = 5.230e-19 Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 61 GHLYSTPAFEYPGLIKAGAHGEYPKEYGHFTTASERSFAYNKRLLARVQADVARHLPLADPEPVSSETCLYTVTRESHFLLDVLPNHPRVVVGGGGSGHAFKHGPILGEILADLCFTGKSDWENEVYKL 447 GH Y+TP + PG K G H + A R ++R+L ++ R+ P A + ETCLYT + + F++DVLP+ PRV VG G SGH FK P++GEILADL G+SD +++ L Sbjct: 103 GHFYATPVYGVPGF-KLGKHHHLGETVDPDDVADPRPA--DERVL---RSFAERYFPGAAGPTMGLETCLYTNSPDGEFVVDVLPDDPRVAVGAGFSGHGFKFSPVVGEILADLAIHGESDHPTDIFGL 225
BLAST of mRNA_M-pyrifera_M_contig104815.1026.1 vs. uniprot
Match: A0A6P8TD22_GYMAC (Sarcosine oxidase n=5 Tax=Notothenioidei TaxID=8205 RepID=A0A6P8TD22_GYMAC) HSP 1 Score: 89.4 bits (220), Expect = 5.230e-18 Identity = 46/129 (35.66%), Postives = 70/129 (54.26%), Query Frame = 1 Query: 64 HLYSTPAFEYPGLIKAGAHGEYPKEYGHFTTASERSFAYNKRLLARVQADVARHLPLADPEPVSSETCLYTVTRESHFLLDVLPNHPRVVVGGGGSGHAFKHGPILGEILADLCFTGKSDWENEVYKLK 450 H+Y P+ EYPGL+K H G T R ++ + +Q VAR P PEP E+C+YT+T +SHF+LD P + +V G G SGH FK GPI+G++L +L ++ ++++ Sbjct: 256 HIYGLPSNEYPGLVKICYH------VGGETDPDHRDKQTDRSDIGILQRFVARCFPGLIPEPAVVESCMYTLTPDSHFVLDCHPAYSNIVFGAGFSGHGFKFGPIIGKLLCELSLGEVPSYDMSPFRIR 378 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104815.1026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104815.1026.1 >prot_M-pyrifera_M_contig104815.1026.1 ID=prot_M-pyrifera_M_contig104815.1026.1|Name=mRNA_M-pyrifera_M_contig104815.1026.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=160bp DYRNFPVLIEYANDRPLHEAGHLYSTPAFEYPGLIKAGAHGEYPKEYGHFback to top mRNA from alignment at M-pyrifera_M_contig104815:2..481+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104815.1026.1 ID=mRNA_M-pyrifera_M_contig104815.1026.1|Name=mRNA_M-pyrifera_M_contig104815.1026.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig104815:2..481+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104815:2..481+ >mRNA_M-pyrifera_M_contig104815.1026.1 ID=mRNA_M-pyrifera_M_contig104815.1026.1|Name=mRNA_M-pyrifera_M_contig104815.1026.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=960bp|location=Sequence derived from alignment at M-pyrifera_M_contig104815:2..481+ (Macrocystis pyrifera P11B4 male)back to top |