mRNA_M-pyrifera_M_contig104780.1023.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104780.1023.1 vs. uniprot
Match: D8LKV1_ECTSI (Coiled-coil domain-containing protein 94 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKV1_ECTSI) HSP 1 Score: 137 bits (346), Expect = 4.150e-37 Identity = 66/77 (85.71%), Postives = 71/77 (92.21%), Query Frame = 1 Query: 4 QGTRFNATKDQAGTYYSTKIWEFSMKCPSCSTVMKIKTDPKNTDYEYVEGIRKKDMAFDPEEAQTERVQDKEVSNKL 234 +GTRFNATKDQAGTYYSTKIW+FSMKCPSCS VM IKTDPKNT YEYVEGIRKKDM FDPEEA+T+RVQD EVS +L Sbjct: 62 RGTRFNATKDQAGTYYSTKIWQFSMKCPSCSNVMVIKTDPKNTGYEYVEGIRKKDMEFDPEEAETQRVQDSEVSKQL 138
BLAST of mRNA_M-pyrifera_M_contig104780.1023.1 vs. uniprot
Match: A0A835Z9T3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T3_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 8.990e-20 Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 4 QGTRFNATKDQAGTYYSTKIWEFSMKCPSCSTVMKIKTDPKNTDYEYVEGIRKKDMAFDPEEAQTERVQDKEVSNKL 234 +GTRFNA K++AG Y++T +W F M+CPSCST IKTDPKN+DYE+ GIR+K+ FD E+A+ + D++ +L Sbjct: 62 KGTRFNAKKEKAGAYFTTTVWAFHMRCPSCSTEFVIKTDPKNSDYEFSAGIRRKEQHFDAEDAEAPVLADEDTQARL 138
BLAST of mRNA_M-pyrifera_M_contig104780.1023.1 vs. uniprot
Match: W7TDI8_9STRA (Coiled-coil domain-containing protein 130 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDI8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.080e-19 Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 1 Query: 4 QGTRFNATKDQAGTYYSTKIWEFSMKCPSCSTVMKIKTDPKNTDYEYVEGIRKKDMAFDPE 186 +G RFNA K QAG Y+STKIWEF MKC SC + I+TDPKN DYE+VEGIR+++ +DPE Sbjct: 61 KGVRFNAKKIQAGNYFSTKIWEFHMKCASCKNRLVIRTDPKNCDYEFVEGIRRREQEYDPE 121
BLAST of mRNA_M-pyrifera_M_contig104780.1023.1 vs. uniprot
Match: A0A1Y2I388_9FUNG (CWC16 protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2I388_9FUNG) HSP 1 Score: 83.2 bits (204), Expect = 4.200e-17 Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 1 Query: 7 GTRFNATKDQAGTYYSTKIWEFSMKCPSCSTVMKIKTDPKNTDYEYVEGIRKKDMAFDPEEAQTERVQDKEVSNKL 234 GTR+NA K +AG YYST IW F MKC C +I+TDPKN +YE VEG RK+ FDPE+AQ V ++ + +L Sbjct: 64 GTRYNAEKKKAGNYYSTPIWSFRMKCHLCPNWFEIRTDPKNAEYEIVEGARKRVEEFDPEDAQVMAVNSEDNAERL 139
BLAST of mRNA_M-pyrifera_M_contig104780.1023.1 vs. uniprot
Match: A0A0P1AVX0_PLAHL (C2C2-type Zn-finger protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVX0_PLAHL) HSP 1 Score: 82.4 bits (202), Expect = 4.250e-17 Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 1 Query: 4 QGTRFNATKDQAGTYYSTKIWEFSMKCPSCSTVMKIKTDPKNTDYEYVEGIRKKDMAFDPEEAQTERVQDKEVSNKL 234 +G RFNA K QAG Y+ST IWEFS+KCPSCS M IKTDPK DYE V G+++K + QTE++ + E++ +L Sbjct: 68 RGVRFNARKKQAGRYFSTVIWEFSLKCPSCSGEMIIKTDPKARDYELVSGVKQKADMKVAGDMQTEKLNEPEIAARL 144
BLAST of mRNA_M-pyrifera_M_contig104780.1023.1 vs. uniprot
Match: R9PCQ9_PSEHS (Uncharacterized protein n=1 Tax=Pseudozyma hubeiensis (strain SY62) TaxID=1305764 RepID=R9PCQ9_PSEHS) HSP 1 Score: 80.5 bits (197), Expect = 2.240e-16 Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 1 SQGTRFNATKDQAGTYYSTKIWEFSMKCPSCSTVMKIKTDPKNTDYEYVEGIRKKDMAFDPEE 189 SQG RFNA K QAG Y STKIW F++KCPSCS ++I+TDPKN Y G RK+ +DPEE Sbjct: 60 SQGLRFNAEKQQAGEYLSTKIWSFAVKCPSCSGRIEIRTDPKNAQYVVESGARKQQQDWDPEE 122
BLAST of mRNA_M-pyrifera_M_contig104780.1023.1 vs. uniprot
Match: A0A3P3YBS5_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YBS5_PLABS) HSP 1 Score: 80.9 bits (198), Expect = 2.300e-16 Identity = 39/77 (50.65%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 4 QGTRFNATKDQAGTYYSTKIWEFSMKCPSCSTVMKIKTDPKNTDYEYVEGIRKKDMAFDPEEAQTERVQDKEVSNKL 234 +G RFNA K G Y++TKIWEF+MKCPSCS V+ ++TDPKNT+Y V G R+K FD ++A+ D E K+ Sbjct: 64 KGVRFNAEKKCVGKYFTTKIWEFTMKCPSCSNVITVQTDPKNTEYVVVGGGRRKVEDFDVDDAEVIEFMDDETRAKI 140
BLAST of mRNA_M-pyrifera_M_contig104780.1023.1 vs. uniprot
Match: X6LQ05_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LQ05_RETFI) HSP 1 Score: 75.9 bits (185), Expect = 4.390e-15 Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 4 QGTRFNATKDQAGTYYSTKIWEFSMKCPSCSTVMKIKTDPKNTDYEYVEGIRKKDMAF 177 +G RFNA KD G Y+STK+WEFSM+C SC ++KI+TDP+ DY+ VEG +KK A+ Sbjct: 62 KGVRFNAKKDHIGHYFSTKLWEFSMRCYSCGNMIKIQTDPEACDYKVVEGAKKKASAY 119
BLAST of mRNA_M-pyrifera_M_contig104780.1023.1 vs. uniprot
Match: A0A7S2HCV6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HCV6_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.640e-14 Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 4 QGTRFNATKDQAGTYYSTKIWEFSMKCPSCSTVMKIKTDPKNTDYEYVEGIRKKDMAFD 180 +GTRFNA K++ G Y+STKIW+FSMKC SC + I TDPKN+DY + GI+KK +D Sbjct: 3 KGTRFNAKKERDGAYFSTKIWKFSMKCASCPQLFVIATDPKNSDYAFRAGIKKKVEEYD 61
BLAST of mRNA_M-pyrifera_M_contig104780.1023.1 vs. uniprot
Match: A0A7S2WQQ1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQQ1_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.680e-14 Identity = 38/73 (52.05%), Postives = 53/73 (72.60%), Query Frame = 1 Query: 4 QGTRFNATKDQAGTYYSTKIWEFSMKCPSCSTVMKIKTDPKNTDYEYVEGIRKKDMAF--DPEEAQTERVQDK 216 +GTRFNA K++ G Y+ T+I++F+MKC SCS + I TDPKNTDY++ GI+KKD F D E+ R+Q+K Sbjct: 62 KGTRFNAKKEKDGMYFRTQIFKFTMKCHSCSHELVIATDPKNTDYDFRSGIKKKDEEFSVDREDGVDSRIQEK 134 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104780.1023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104780.1023.1 >prot_M-pyrifera_M_contig104780.1023.1 ID=prot_M-pyrifera_M_contig104780.1023.1|Name=mRNA_M-pyrifera_M_contig104780.1023.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp SQGTRFNATKDQAGTYYSTKIWEFSMKCPSCSTVMKIKTDPKNTDYEYVEback to top mRNA from alignment at M-pyrifera_M_contig104780:214..447+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104780.1023.1 ID=mRNA_M-pyrifera_M_contig104780.1023.1|Name=mRNA_M-pyrifera_M_contig104780.1023.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=234bp|location=Sequence derived from alignment at M-pyrifera_M_contig104780:214..447+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104780:214..447+ >mRNA_M-pyrifera_M_contig104780.1023.1 ID=mRNA_M-pyrifera_M_contig104780.1023.1|Name=mRNA_M-pyrifera_M_contig104780.1023.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig104780:214..447+ (Macrocystis pyrifera P11B4 male)back to top |