mRNA_M-pyrifera_M_contig104350.931.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104350.931.1 vs. uniprot
Match: UPI00156076C8 (vacuolar protein sorting-associated protein 26C n=3 Tax=Acipenseroidei TaxID=186622 RepID=UPI00156076C8) HSP 1 Score: 152 bits (385), Expect = 2.030e-42 Identity = 76/185 (41.08%), Postives = 120/185 (64.86%), Query Frame = 1 Query: 1 MFDGCAVTARGTVSPQTTGRGASVLSARGASIRPVTILFDEIEMESEGSLPGGELELPFRFGVDPVDGEELVETYHGVYVSVVYSIHVVLKRTGLFTSHLEKEVTFAVH-VPSKGEVEPTPVDVRVTPETLRNIKGAASLPPFEVVGRIHQTKCSLSRPLTGEIEIKSSETPIRSVDVQLVRVET 552 G ++T GTV+ Q + + V A S++P+T++ IE+ G PGG+ E+PF F + + L ETYHGV+V++ Y++ +KR+ L L K F VH +P KG++ P+PV+ +TP+TL+N++ +SLP F + G +H T C LS+PL+GE+ ++SSE PI+S+++QLVRVET Sbjct: 35 QHQGLSLTMEGTVNLQLSSKSVGVFEAFYNSVKPITLISSNIEVVKPGKFPGGKTEIPFEFPLHVKGNKVLYETYHGVFVNIQYTLRCDMKRS-LLAKDLSKTCEFMVHSLPQKGKLTPSPVEFSITPDTLQNVRERSSLPKFLIRGHLHTTTCILSQPLSGELVVESSEVPIKSIELQLVRVET 218
BLAST of mRNA_M-pyrifera_M_contig104350.931.1 vs. uniprot
Match: A0A7J8HXT3_ROUAE (VPS26 endosomal protein sorting factor C n=1 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8HXT3_ROUAE) HSP 1 Score: 152 bits (384), Expect = 2.530e-42 Identity = 79/185 (42.70%), Postives = 117/185 (63.24%), Query Frame = 1 Query: 1 MFDGCAVTARGTVSPQTTGRGASVLSARGASIRPVTILFDEIEMESEGSLPGGELELPFRFGVDPVDGEELVETYHGVYVSVVYSIHVVLKRTGLFTSHLEKEVTFAVH-VPSKGEVEPTPVDVRVTPETLRNIKGAASLPPFEVVGRIHQTKCSLSRPLTGEIEIKSSETPIRSVDVQLVRVET 552 G ++TA GTV+ Q + + V A S++P+ I+ +EM G P G+ E+PF F + G+ L ETYHGV+VS+ Y++ +KR+ L L K F VH P KG++ P+PVD +TPETL+N+K A LP F + G ++ T C +++PLTGE+ ++SSE IRS+++QLVRVET Sbjct: 30 QHQGVSLTAEGTVNLQLSAKSVGVFEAFYNSVKPIQIISSTMEMVKPGKFPSGKTEIPFEFPLQGKGGKVLYETYHGVFVSIQYTLRCDMKRS-LLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPETLQNVKERALLPKFLIRGHLNSTSCVITQPLTGELVVESSEAAIRSIELQLVRVET 213
BLAST of mRNA_M-pyrifera_M_contig104350.931.1 vs. uniprot
Match: A0A7S1CDP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CDP7_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.910e-42 Identity = 78/184 (42.39%), Postives = 114/184 (61.96%), Query Frame = 1 Query: 7 DGCAVTARGTVSPQTTGRGASVLSARGASIRPVTILFDEIEMESEGSLPGGELELPFRFGVDPVDGEELVETYHGVYVSVVYSIHVVLKRTGLFTSHLEKEVTFAVHVPSKGEVEPTPVDVRVTPETLRNIKGAA--SLPPFEVVGRIHQTKCSLSRPLTGEIEIKSSETPIRSVDVQLVRVET 552 +G + G V PQ + R + A S++P+T+L +IE+ G L GE E PF F V PVDG++L+ETYHGVYV+V Y + V + R G F L F V VPS + P P + VTPE+L N+K ++ S+P F + G+IH+ C + +P TGE+ +++SE I+S+++QLVRVET Sbjct: 59 NGMTLHVEGVVKPQLSPRSVGLFEAFYTSMKPITLLAADIEIAEGGRLEEGETEFPFEFDVVPVDGQDLLETYHGVYVNVTYEVSVTMVR-GAFAKDLAAAEEFYVQVPSAEGMSPDPSEFTVTPESLENVKASSVSSIPDFRITGKIHKRNCLIDKPFTGELRVEASEGEIQSIELQLVRVET 241
BLAST of mRNA_M-pyrifera_M_contig104350.931.1 vs. uniprot
Match: A0A6J2L4B1_9CHIR (VPS26 endosomal protein sorting factor C n=16 Tax=Laurasiatheria TaxID=314145 RepID=A0A6J2L4B1_9CHIR) HSP 1 Score: 152 bits (383), Expect = 4.040e-42 Identity = 79/185 (42.70%), Postives = 116/185 (62.70%), Query Frame = 1 Query: 1 MFDGCAVTARGTVSPQTTGRGASVLSARGASIRPVTILFDEIEMESEGSLPGGELELPFRFGVDPVDGEELVETYHGVYVSVVYSIHVVLKRTGLFTSHLEKEVTFAVH-VPSKGEVEPTPVDVRVTPETLRNIKGAASLPPFEVVGRIHQTKCSLSRPLTGEIEIKSSETPIRSVDVQLVRVET 552 G ++T GTV+ Q + + V A S++P+ I+ IEM G PGG+ E+PF F + + L ETYHGV+V++ Y++ ++R+ L L K F VH P KG + P+PVD +TPETL+N+K ASLP F V GR+ T C +++PLTGE+ ++SSE +RS+++QLVRVET Sbjct: 35 QHQGVSLTVEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTIEMVKPGKFPGGKTEIPFEFPLHGKGSKVLYETYHGVFVNIQYTLRCDMRRS-LLAKDLTKTCEFIVHSAPQKGRLTPSPVDFTITPETLQNVKERASLPKFLVRGRLDSTSCVITQPLTGELVVESSEAAVRSIELQLVRVET 218
BLAST of mRNA_M-pyrifera_M_contig104350.931.1 vs. uniprot
Match: A0A6J0DKD1_PERMB (Down syndrome critical region protein 3 n=4 Tax=Muroidea TaxID=337687 RepID=A0A6J0DKD1_PERMB) HSP 1 Score: 148 bits (373), Expect = 1.260e-40 Identity = 77/185 (41.62%), Postives = 117/185 (63.24%), Query Frame = 1 Query: 1 MFDGCAVTARGTVSPQTTGRGASVLSARGASIRPVTILFDEIEMESEGSLPGGELELPFRFGVDPVDGEELVETYHGVYVSVVYSIHVVLKRTGLFTSHLEKEVTFAVH-VPSKGEVEPTPVDVRVTPETLRNIKGAASLPPFEVVGRIHQTKCSLSRPLTGEIEIKSSETPIRSVDVQLVRVET 552 G ++T GTVS Q + R V A S++P+ IL I++ G LP G+ E+PF F + + L ETYHGV+V++ Y++ ++R+ L L K F VH P KG++ P+PVD +TPETL+N+K ASLP F + G ++ T C++++PLTGE+ ++ S+ IRS+++QLVRVET Sbjct: 35 QHQGVSLTMEGTVSLQLSARSVGVFEAFYNSVKPIQILNSTIDVLKPGKLPSGKTEIPFEFPLHVKGSKVLYETYHGVFVNIQYTLRCDMRRS-LLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPETLQNVKERASLPKFLIRGHLNSTNCAITQPLTGELVVEHSDAAIRSIELQLVRVET 218
BLAST of mRNA_M-pyrifera_M_contig104350.931.1 vs. uniprot
Match: Q4FZN8_XENLA (LOC431791 protein n=5 Tax=Xenopus TaxID=8353 RepID=Q4FZN8_XENLA) HSP 1 Score: 147 bits (372), Expect = 1.780e-40 Identity = 75/185 (40.54%), Postives = 117/185 (63.24%), Query Frame = 1 Query: 1 MFDGCAVTARGTVSPQTTGRGASVLSARGASIRPVTILFDEIEMESEGSLPGGELELPFRFGVDPVDGEELVETYHGVYVSVVYSIHVVLKRTGLFTSHLEKEVTFAVH-VPSKGEVEPTPVDVRVTPETLRNIKGAASLPPFEVVGRIHQTKCSLSRPLTGEIEIKSSETPIRSVDVQLVRVET 552 G +T G+V+ Q + + V A S++P+ I+ + +EM G LP G+ E+PF F ++ + L ETYHGV+V++ YS+ +KR+ L L K F +H +P K ++ PTPVD +TPETL+N+K ASLP F + G + T C +++PLTGE+ +++SE I+S+++QLVRVET Sbjct: 35 QHQGITLTMEGSVNLQLSAKSVGVFEAFYNSVKPIQIISNSMEMVKPGKLPSGKTEIPFEFPLNAKGNKVLYETYHGVFVNIQYSLRCDMKRS-LLAKDLTKSCEFIIHSLPQKAKLPPTPVDFTITPETLQNVKERASLPRFLIRGHLDSTNCMITQPLTGELLVETSEVAIKSIELQLVRVET 218
BLAST of mRNA_M-pyrifera_M_contig104350.931.1 vs. uniprot
Match: G1P4W8_MYOLU (VPS26 endosomal protein sorting factor C n=10 Tax=Vespertilionidae TaxID=9431 RepID=G1P4W8_MYOLU) HSP 1 Score: 147 bits (372), Expect = 1.780e-40 Identity = 77/185 (41.62%), Postives = 115/185 (62.16%), Query Frame = 1 Query: 1 MFDGCAVTARGTVSPQTTGRGASVLSARGASIRPVTILFDEIEMESEGSLPGGELELPFRFGVDPVDGEELVETYHGVYVSVVYSIHVVLKRTGLFTSHLEKEVTFAVH-VPSKGEVEPTPVDVRVTPETLRNIKGAASLPPFEVVGRIHQTKCSLSRPLTGEIEIKSSETPIRSVDVQLVRVET 552 G ++T GTV+ Q + + V A S++P+ I+ IEM G P G+ E+PF F + + L ETYHGV+V++ Y++ +KR+ L L K F VH P KG++ P+PVD +TPETL+N+K A LP F V G ++ T C +++PLTGE+ ++SSE +RS+++QLVRVET Sbjct: 35 QHQGLSLTVEGTVNLQLSAKSVGVFEAFYNSVKPIQIINSTIEMVKPGKFPSGKTEIPFEFPLHVKGNKVLYETYHGVFVNIQYTLRCDMKRS-LLAKDLTKTCEFIVHSAPQKGKLTPSPVDFAITPETLQNVKERALLPKFLVRGHLNSTNCVITQPLTGELVVESSEAAVRSIELQLVRVET 218
BLAST of mRNA_M-pyrifera_M_contig104350.931.1 vs. uniprot
Match: UPI001CFC2AC1 (vacuolar protein sorting-associated protein 26C isoform X1 n=2 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFC2AC1) HSP 1 Score: 147 bits (372), Expect = 1.780e-40 Identity = 72/182 (39.56%), Postives = 119/182 (65.38%), Query Frame = 1 Query: 10 GCAVTARGTVSPQTTGRGASVLSARGASIRPVTILFDEIEMESEGSLPGGELELPFRFGVDPVDGEELVETYHGVYVSVVYSIHVVLKRTGLFTSHLEKEVTFAVH-VPSKGEVEPTPVDVRVTPETLRNIKGAASLPPFEVVGRIHQTKCSLSRPLTGEIEIKSSETPIRSVDVQLVRVET 552 G ++T G+V+ Q + + V A S++P+ ++ +E+ +G LP G+ E+PF F + + L ETYHGV+V++ Y++ ++R+ L L K F VH +P KG++ P+PVD + PETL+NIK A+LP F + GR++ T C +++PLTG + ++SSE P++S+++QLVRVET Sbjct: 38 GISLTMEGSVNLQLSAKSVGVFEAFYNSVKPIQLISCNVEISKQGKLPSGKTEIPFEFPLQMKGNKVLYETYHGVFVNIQYTLKCDIRRS-LLAKDLTKSCEFIVHSLPQKGKLSPSPVDFTIAPETLQNIKERATLPKFRIKGRLNSTNCVITQPLTGVLVVESSEVPVKSIELQLVRVET 218
BLAST of mRNA_M-pyrifera_M_contig104350.931.1 vs. uniprot
Match: A0A8C9RPR4_SCLFO (VPS26 endosomal protein sorting factor C n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9RPR4_SCLFO) HSP 1 Score: 147 bits (370), Expect = 2.320e-40 Identity = 74/185 (40.00%), Postives = 116/185 (62.70%), Query Frame = 1 Query: 1 MFDGCAVTARGTVSPQTTGRGASVLSARGASIRPVTILFDEIEMESEGSLPGGELELPFRFGVDPVDGEELVETYHGVYVSVVYSIHVVLKRTGLFTSHLEKEVTFAVHV-PSKGEVEPTPVDVRVTPETLRNIKGAASLPPFEVVGRIHQTKCSLSRPLTGEIEIKSSETPIRSVDVQLVRVET 552 G ++T G V+ Q + + V A S++P+ ++ IE+ G +PGG+ E+PF F + + L ETYHGV+V++ Y++ +KR+ L L K F VH P KG ++P+PVD +TPETL+NI+ SLP F + G + T C +++PLTGE+ +++SE PI+S+++QLVRVET Sbjct: 18 QHQGISLTMEGLVNLQLSSKSVGVFEAFYNSVKPIQLITSNIEVVKPGKVPGGKTEIPFEFPLHAKGNKVLYETYHGVFVNIQYTLRCDMKRS-LLAKDLSKTCEFMVHCQPQKGRLQPSPVDFSITPETLQNIRERVSLPKFLIRGHLDATSCVITQPLTGELVVENSEVPIKSIELQLVRVET 201
BLAST of mRNA_M-pyrifera_M_contig104350.931.1 vs. uniprot
Match: F7ALR6_CALJA (VPS26 endosomal protein sorting factor C n=4 Tax=Callithrix jacchus TaxID=9483 RepID=F7ALR6_CALJA) HSP 1 Score: 147 bits (371), Expect = 2.510e-40 Identity = 78/185 (42.16%), Postives = 115/185 (62.16%), Query Frame = 1 Query: 1 MFDGCAVTARGTVSPQTTGRGASVLSARGASIRPVTILFDEIEMESEGSLPGGELELPFRFGVDPVDGEELVETYHGVYVSVVYSIHVVLKRTGLFTSHLEKEVTFAVH-VPSKGEVEPTPVDVRVTPETLRNIKGAASLPPFEVVGRIHQTKCSLSRPLTGEIEIKSSETPIRSVDVQLVRVET 552 G ++T GTV+ Q + + V A S++P+ IL IEM G P G+ E+PF F + + L ETYHGV+V++ Y++ ++R+ L L K F VH P KG++ P+PVD +TPETL+N+K A LP F + G ++ T C +++PLTGE+ ++SSE IRSV++QLVRVET Sbjct: 35 QHQGVSLTMEGTVNLQLSAKSVGVFEAFYNSVKPIQILNSTIEMVKPGKFPSGKTEIPFEFPLHVKGNKVLYETYHGVFVNIQYTLRCDMRRS-LLAKDLTKTCEFIVHSAPQKGKLTPSPVDFTITPETLQNVKERALLPKFLIRGHLNSTNCVITQPLTGELVVESSEAAIRSVELQLVRVET 218 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104350.931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104350.931.1 >prot_M-pyrifera_M_contig104350.931.1 ID=prot_M-pyrifera_M_contig104350.931.1|Name=mRNA_M-pyrifera_M_contig104350.931.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=184bp MFDGCAVTARGTVSPQTTGRGASVLSARGASIRPVTILFDEIEMESEGSLback to top mRNA from alignment at M-pyrifera_M_contig104350:26..577- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104350.931.1 ID=mRNA_M-pyrifera_M_contig104350.931.1|Name=mRNA_M-pyrifera_M_contig104350.931.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=552bp|location=Sequence derived from alignment at M-pyrifera_M_contig104350:26..577- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104350:26..577- >mRNA_M-pyrifera_M_contig104350.931.1 ID=mRNA_M-pyrifera_M_contig104350.931.1|Name=mRNA_M-pyrifera_M_contig104350.931.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1104bp|location=Sequence derived from alignment at M-pyrifera_M_contig104350:26..577- (Macrocystis pyrifera P11B4 male)back to top |