mRNA_M-pyrifera_M_contig104332.923.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104332.923.1
Unique NamemRNA_M-pyrifera_M_contig104332.923.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig104332.923.1 vs. uniprot
Match: UPI001FE5E468 (GNAT family N-acetyltransferase n=1 Tax=Fictibacillus nanhaiensis TaxID=742169 RepID=UPI001FE5E468)

HSP 1 Score: 79.7 bits (195), Expect = 1.750e-17
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 1 
Query:    1 YLFGTVTEIMVHPAHQRNGIGRTLMDMAWNFIPTGLVVGAQEGREEFLEKLGYKPGMTAYYRAK 192
            Y+FGT+ EI+VHP +Q+ GIGR LM++AW   PT L +GAQ G+E F EKLGY   + +Y + K
Sbjct:   65 YIFGTIPEILVHPDYQKLGIGRQLMELAWEASPTSLFLGAQPGKEAFFEKLGYTKSLQSYQKKK 128
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BLAST of mRNA_M-pyrifera_M_contig104332.923.1 vs. uniprot
Match: A0A165PA88_9BACI (Acetyltransferase n=2 Tax=Fictibacillus phosphorivorans TaxID=1221500 RepID=A0A165PA88_9BACI)

HSP 1 Score: 75.5 bits (184), Expect = 7.290e-16
Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 1 
Query:    1 YLFGTVTEIMVHPAHQRNGIGRTLMDMAWNFIPTGLVVGAQEGREEFLEKLGYKPGMTAYYRAK 192
            YLFGT+TEI+VHP +Q   IG+ LM+MAW   PT L +GAQ G+E F EK G+   + ++ + K
Sbjct:   61 YLFGTITEILVHPDYQGKRIGKELMEMAWELSPTSLFIGAQPGKEAFFEKAGFTKSIQSFQKKK 124
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BLAST of mRNA_M-pyrifera_M_contig104332.923.1 vs. uniprot
Match: UPI001B00B886 (GNAT family N-acetyltransferase n=1 Tax=Brevibacillus reuszeri TaxID=54915 RepID=UPI001B00B886)

HSP 1 Score: 73.9 bits (180), Expect = 3.000e-15
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 1 
Query:    1 YLFGTVTEIMVHPAHQRNGIGRTLMDMAWNFIPTGLVVGAQEGREEFLEKLGYKPGMTAYYRAKPAP 201
            Y FGT++EI+V   +Q NGIG+ LM++AW+  PT L  GAQ G E F EKLGY+    ++++ K  P
Sbjct:   63 YFFGTISEILVKREYQGNGIGKKLMELAWDVSPTSLFFGAQPGNEPFFEKLGYERSFQSFFKRKARP 129
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BLAST of mRNA_M-pyrifera_M_contig104332.923.1 vs. uniprot
Match: UPI0012EA87C4 (GNAT family N-acetyltransferase n=1 Tax=Fictibacillus arsenicus TaxID=255247 RepID=UPI0012EA87C4)

HSP 1 Score: 72.8 bits (177), Expect = 8.320e-15
Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 1 
Query:    1 YLFGTVTEIMVHPAHQRNGIGRTLMDMAWNFIPTGLVVGAQEGREEFLEKLGYKPGMTAYYRAK 192
            Y FGT++EI+V P +Q  GIG+ LM +AW   PT L  GAQ G+E F EKL Y  G+ +Y + K
Sbjct:   61 YFFGTISEILVLPDYQNRGIGKRLMQLAWEASPTSLFFGAQPGKESFFEKLSYTRGIQSYQKKK 124
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BLAST of mRNA_M-pyrifera_M_contig104332.923.1 vs. uniprot
Match: UPI001605C95A (GNAT family N-acetyltransferase n=1 Tax=Brevibacillus invocatus TaxID=173959 RepID=UPI001605C95A)

HSP 1 Score: 71.6 bits (174), Expect = 1.040e-14
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 1 
Query:    1 YLFGTVTEIMVHPAHQRNGIGRTLMDMAWNFIPTGLVVGAQEGREEFLEKLGYKPGMTAYYRAKPAP 201
            Y F T+TEI+V  ++Q  GIG+ LM++AW+  PT L  GAQ G E F EKLGY+  M ++ + K  P
Sbjct:   28 YYFSTITEILVRSSYQGKGIGKKLMELAWDASPTSLFFGAQPGNEVFFEKLGYQKSMQSFEKKKARP 94
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BLAST of mRNA_M-pyrifera_M_contig104332.923.1 vs. uniprot
Match: UPI001CD84312 (GNAT family N-acetyltransferase n=1 Tax=Fictibacillus sp. Sa2CUA10 TaxID=2762233 RepID=UPI001CD84312)

HSP 1 Score: 72.4 bits (176), Expect = 1.360e-14
Identity = 31/64 (48.44%), Postives = 44/64 (68.75%), Query Frame = 1 
Query:    1 YLFGTVTEIMVHPAHQRNGIGRTLMDMAWNFIPTGLVVGAQEGREEFLEKLGYKPGMTAYYRAK 192
            Y FGT+TEI+V P +Q   IG+ LM++A+   PT L +GAQ G+E+F EKLGY   + +Y + K
Sbjct:   68 YFFGTITEILVSPGYQEKKIGKHLMELAFEHSPTSLFIGAQPGKEQFFEKLGYTKSIQSYQKKK 131
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BLAST of mRNA_M-pyrifera_M_contig104332.923.1 vs. uniprot
Match: UPI001CFB46C4 (GNAT family N-acetyltransferase n=1 Tax=Fictibacillus halophilus TaxID=1610490 RepID=UPI001CFB46C4)

HSP 1 Score: 70.1 bits (170), Expect = 3.600e-14
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 1 
Query:    1 YLFGTVTEIMVHPAHQRNGIGRTLMDMAWNFIPTGLVVGAQEGREEFLEKLGYKPGMTAYYRAK 192
            Y FGT++EI+V P  Q+ GIG+ LM++AW    T L  GAQ G+E F EKLG+  G+ +Y + K
Sbjct:   22 YFFGTISEILVLPEFQKMGIGKRLMELAWETTHTSLFFGAQPGKEPFFEKLGFVKGIQSYQKKK 85
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BLAST of mRNA_M-pyrifera_M_contig104332.923.1 vs. uniprot
Match: A0A1B1Z1W2_9BACI (Uncharacterized protein n=1 Tax=Fictibacillus arsenicus TaxID=255247 RepID=A0A1B1Z1W2_9BACI)

HSP 1 Score: 72.8 bits (177), Expect = 1.320e-13
Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 1 
Query:    1 YLFGTVTEIMVHPAHQRNGIGRTLMDMAWNFIPTGLVVGAQEGREEFLEKLGYKPGMTAYYRAK 192
            Y FGT++EI+V P +Q  GIG+ LM +AW   PT L  GAQ G+E F EKL Y  G+ +Y + K
Sbjct:  228 YFFGTISEILVLPDYQNRGIGKRLMQLAWEASPTSLFFGAQPGKESFFEKLSYTRGIQSYQKKK 291
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BLAST of mRNA_M-pyrifera_M_contig104332.923.1 vs. uniprot
Match: UPI001FB01F96 (GNAT family N-acetyltransferase n=1 Tax=Caldicoprobacter guelmensis TaxID=1170224 RepID=UPI001FB01F96)

HSP 1 Score: 68.2 bits (165), Expect = 2.290e-13
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 1 
Query:    1 YLFGTVTEIMVHPAHQRNGIGRTLMDMAWNFIPTGLVVGAQEGREEFLEKLGYKPGMTAYYRAK 192
            Y FGT+ +I V P +Q +GIG+ LM++AW   PT L  G+Q G E F EKLG+   M +Y + K
Sbjct:   27 YYFGTIPDIFVAPEYQGHGIGKKLMELAWEASPTSLFFGSQPGNEGFFEKLGFTKSMRSYEKKK 90
[Close]
BLAST of mRNA_M-pyrifera_M_contig104332.923.1 vs. uniprot
Match: UPI00164CD810 (GNAT family N-acetyltransferase n=1 Tax=Anaerofilum sp. BX8 TaxID=2763016 RepID=UPI00164CD810)

HSP 1 Score: 65.9 bits (159), Expect = 5.510e-12
Identity = 35/70 (50.00%), Postives = 43/70 (61.43%), Query Frame = 1 
Query:    1 YLFGTVTEIMVHPAHQRNGIGRTLMDMAWNFIPTGLVVGAQEGREEFLEKLGYKPGMTAYYRAK-PAPAP 207
            Y FGT+TE++V P+HQR GIG  L+ +A    PT L  GAQ G E F EK G + G+ AY   K P P P
Sbjct:   61 YYFGTITELLVLPSHQRQGIGSELLRLARQHAPTLLYFGAQPGAEAFYEKNGCQKGLQAYVIEKGPKPIP 130
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104332.923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001FE5E4681.750e-1753.13GNAT family N-acetyltransferase n=1 Tax=Fictibacil... [more]
A0A165PA88_9BACI7.290e-1650.00Acetyltransferase n=2 Tax=Fictibacillus phosphoriv... [more]
UPI001B00B8863.000e-1547.76GNAT family N-acetyltransferase n=1 Tax=Brevibacil... [more]
UPI0012EA87C48.320e-1550.00GNAT family N-acetyltransferase n=1 Tax=Fictibacil... [more]
UPI001605C95A1.040e-1447.76GNAT family N-acetyltransferase n=1 Tax=Brevibacil... [more]
UPI001CD843121.360e-1448.44GNAT family N-acetyltransferase n=1 Tax=Fictibacil... [more]
UPI001CFB46C43.600e-1448.44GNAT family N-acetyltransferase n=1 Tax=Fictibacil... [more]
A0A1B1Z1W2_9BACI1.320e-1350.00Uncharacterized protein n=1 Tax=Fictibacillus arse... [more]
UPI001FB01F962.290e-1346.88GNAT family N-acetyltransferase n=1 Tax=Caldicopro... [more]
UPI00164CD8105.510e-1250.00GNAT family N-acetyltransferase n=1 Tax=Anaerofilu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104332contigM-pyrifera_M_contig104332:185..461 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size216
Cds size189
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104332.923.1prot_M-pyrifera_M_contig104332.923.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104332 185..434 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815549.8653965-CDS-M-pyrifera_M_contig104332:184..3121622815549.8653965-CDS-M-pyrifera_M_contig104332:184..312Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104332 185..312 -
1692277459.3086867-CDS-M-pyrifera_M_contig104332:184..3121692277459.3086867-CDS-M-pyrifera_M_contig104332:184..312Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104332 185..312 -
1622815549.8769443-CDS-M-pyrifera_M_contig104332:373..4341622815549.8769443-CDS-M-pyrifera_M_contig104332:373..434Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104332 374..434 -
1692277459.3178334-CDS-M-pyrifera_M_contig104332:373..4341692277459.3178334-CDS-M-pyrifera_M_contig104332:373..434Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104332 374..434 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815549.8894374-UTR-M-pyrifera_M_contig104332:434..4611622815549.8894374-UTR-M-pyrifera_M_contig104332:434..461Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104332 435..461 -
1692277459.3270414-UTR-M-pyrifera_M_contig104332:434..4611692277459.3270414-UTR-M-pyrifera_M_contig104332:434..461Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104332 435..461 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104332.923.1

>prot_M-pyrifera_M_contig104332.923.1 ID=prot_M-pyrifera_M_contig104332.923.1|Name=mRNA_M-pyrifera_M_contig104332.923.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=63bp
MVHPAHQRNGIGRTLMDMAWNFIPTGLVVGAQEGREEFLEKLGYKPGMTA
YYRAKPAPAPLQ*
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mRNA from alignment at M-pyrifera_M_contig104332:185..461-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104332.923.1 ID=mRNA_M-pyrifera_M_contig104332.923.1|Name=mRNA_M-pyrifera_M_contig104332.923.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=277bp|location=Sequence derived from alignment at M-pyrifera_M_contig104332:185..461- (Macrocystis pyrifera P11B4 male)
TACTTGTTTGGAACTGTGACAGAGATTATGGTGCATCCAGCGCACCAGAG
GAACGGCATTGGCCGTACCCTCATGGACATGGCCTGGAGTGCGTCCCCTC
CCTCACGCCAGGCGATGGCTCCGCTGCTCCAGTGCGCTGACAAGGACAGA
CTTCATTCCCACAGGCTTGGTGGTGGGCGCACAGGAGGGCAGAGAAGAGT
TCCTCGAGAAGCTGGGCTACAAGCCTGGCATGACCGCCTACTACCGCGCG
AAGCCTGCCCCCGCGCCACTGCAATAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104332:185..461-

>mRNA_M-pyrifera_M_contig104332.923.1 ID=mRNA_M-pyrifera_M_contig104332.923.1|Name=mRNA_M-pyrifera_M_contig104332.923.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=378bp|location=Sequence derived from alignment at M-pyrifera_M_contig104332:185..461- (Macrocystis pyrifera P11B4 male)
ATGGTGCATCCAGCGCACCAGAGGAACGGCATTGGCCGTACCCTCATGGA
CATGGCCTGGAATGGTGCATCCAGCGCACCAGAGGAACGGCATTGGCCGT
ACCCTCATGGACATGGCCTGGAACTTCATTCCCACAGGCTTGGTGGTGGG
CGCACAGGAGGGCAGAGAAGAGTTCCTCGAGAAGCTGGGCTACAAGCCTG
GCATGACCGCCTACTACCGCGCGAAGCCTGCCCCCGCGCCACTGCAATAG
ACTTCATTCCCACAGGCTTGGTGGTGGGCGCACAGGAGGGCAGAGAAGAG
TTCCTCGAGAAGCTGGGCTACAAGCCTGGCATGACCGCCTACTACCGCGC
GAAGCCTGCCCCCGCGCCACTGCAATAG
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