mRNA_M-pyrifera_M_contig104327.919.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104327.919.1
Unique NamemRNA_M-pyrifera_M_contig104327.919.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig104327.919.1 vs. uniprot
Match: A0A3L6V5Q5_9STRA (Subtilisin (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V5Q5_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.470e-34
Identity = 81/187 (43.32%), Postives = 106/187 (56.68%), Query Frame = 1
Query:    1 PDAALFSRQGRAYPDVSALAHNFPVFLRGRWSLIHGTYASAPVVAALISLINDARLMADKPTLGFLNPWLYSAASNHPDAFTDVVVGENACAVNE-LACCPSSFHARAGWDPVTGLGTLNFAALRNLALN-----EDQLILTAAPLVRNNDNGHDHHHTSVPL--APVIIVFALLAAAAIAVVFVVR 537
            P  + F+  GRAYPDV+A  H++ V L G  +LI GT AS P  AA+I+L+ND RL A KP LGFLNP LY   + +P AF D++ G NA  +   +  C  SFHA +GWD V+GLG+ NF  L  L LN      D  +L   P + N     D   +   L  A V  + A +A AA A+V+V R
Sbjct:   96 PPPSFFNVSGRAYPDVTAFGHDYIVVLNGDKALISGTSASTPAFAAMITLVNDLRLNAGKPALGFLNPTLYRLQAAYPLAFHDIITGTNAAGMGPAMPVCDLSFHAESGWDAVSGLGSPNFPVLSQLLLNVEDVLSDTKVLANVPPLSNQQMQEDASGSVKTLVGASVAALVAAVAVAAAALVYVKR 282          
BLAST of mRNA_M-pyrifera_M_contig104327.919.1 vs. uniprot
Match: A0A2P6NR90_9EUKA (Peptidase S53 domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NR90_9EUKA)

HSP 1 Score: 133 bits (334), Expect = 9.240e-33
Identity = 67/128 (52.34%), Postives = 86/128 (67.19%), Query Frame = 1
Query:   10 ALFSRQGRAYPDVSALAHNFPVFLRGRWSLIHGTYASAPVVAALISLINDARLMADKPTLGFLNPWLYSAASNHPDAFTDVVVGENACAVNELACCPSSFHARAGWDPVTGLGTLNFAALRNLALNED 393
            + ++  GR YPD+SA+ HNF V L    S I GT ASAPV+A LI+L+NDARL A K  LGFLNPWLY  +S+H   F D+V G+N+C+     CC   F A+ G+D VTGLG+ NFAAL   AL+ +
Sbjct:  696 SFYNTTGRVYPDISAIGHNFVVILDEEISPIDGTSASAPVIAGLITLLNDARLNAGKGPLGFLNPWLYGLSSDH---FNDIVTGDNSCSELPWVCCDYGFPAKPGYDAVTGLGSPNFAALLKSALSHN 820          
BLAST of mRNA_M-pyrifera_M_contig104327.919.1 vs. uniprot
Match: A0A0P1ACG2_PLAHL (Subtilisin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACG2_PLAHL)

HSP 1 Score: 130 bits (328), Expect = 5.260e-32
Identity = 64/144 (44.44%), Postives = 90/144 (62.50%), Query Frame = 1
Query:   13 LFSRQGRAYPDVSALAHNFPVFLRGRWSLIHGTYASAPVVAALISLINDARLMADKPTLGFLNPWLYSAASNHPDAFTDVVVGENACAVNELACCPSSFHARAGWDPVTGLGTLNFAALRNLALN-EDQLILTAAPLVRNNDNG 441
             F+  GRAYPDV+AL  NF ++L+GR + + GT AS PV+ A+++L ND RL A K  LGFLNP  Y  A  HPDAF D+++G NA        C  SF A AGWD V+G+GT NF+ +     N ED   ++ +  ++++D+ 
Sbjct:  474 FFNASGRAYPDVAALGANFLIYLKGRLASVSGTSASTPVLGAMVTLWNDLRLNAGKSPLGFLNPLFYYLAETHPDAFNDIIIGNNAAPRGGHTPCNDSFSAAAGWDAVSGVGTPNFSVIYKFIANLEDHFNISQSNKLKDSDSA 617          
BLAST of mRNA_M-pyrifera_M_contig104327.919.1 vs. uniprot
Match: T0SBH8_SAPDV (Subtilisin n=2 Tax=Saprolegnia TaxID=4769 RepID=T0SBH8_SAPDV)

HSP 1 Score: 130 bits (328), Expect = 5.300e-32
Identity = 70/151 (46.36%), Postives = 91/151 (60.26%), Query Frame = 1
Query:    1 PDAALFSRQGRAYPDVSALAHNFPVFLRGRWSLIHGTYASAPVVAALISLINDARLMADKPTLGFLNPWLYSAASNHPDAFTDVVVGENACAVNELA-CCPSSFHARAGWDPVTGLGTLNFAALRNLALNEDQLILTA---APLVRNNDNG 441
            P  A F+  GRAYPDV+A   NF V +RG  SLI GT ASAPV A  ++LIND RL A KP LGF+NP LY A +  P +F D+VVG  A  +      C  +F A +GWD  +GLG+ NF  LR+L ++ +  + TA    P  +N+  G
Sbjct:  470 PSLAYFNAFGRAYPDVAAFGSNFKVVIRGSTSLISGTSASAPVFAGTLTLINDLRLNAGKPPLGFVNPLLYKAYAQDPRSFNDIVVGSIAAGMGSAKPVCSQTFRATSGWDAASGLGSPNFEVLRDLLVHPEAWLATAFDGPPKAKNSSQG 620          
BLAST of mRNA_M-pyrifera_M_contig104327.919.1 vs. uniprot
Match: W4FSS2_9STRA (Subtilisin n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FSS2_9STRA)

HSP 1 Score: 130 bits (327), Expect = 7.350e-32
Identity = 81/187 (43.32%), Postives = 105/187 (56.15%), Query Frame = 1
Query:    1 PDAALFSRQGRAYPDVSALAHNFPVFLRGRWSLIHGTYASAPVVAALISLINDARLMADKPTLGFLNPWLYSAASNHPDAFTDVVVGENACAVNE-LACCPSSFHARAGWDPVTGLGTLNFAALRNLALN-----EDQLILTAAPLVRNNDNGHDHHHTSVPL--APVIIVFALLAAAAIAVVFVVR 537
            P  + F+  GRAYPDV+A  H++ V L G  +LI GT AS P  AA+I+L+ND RL A KP LGF+NP LY   + +P AF D+  G NA  +   +  C  SFHA +GWD V+GLG+ NF  L  L LN      D  +L   P + N     D   +   L  A V  + A +A AA AVV+V R
Sbjct:  491 PPPSFFNVSGRAYPDVTAFGHDYIVVLNGDKALISGTSASTPAFAAMITLVNDLRLNAGKPALGFINPALYRLQAAYPLAFHDITTGTNAAGMGPGMPVCDLSFHAESGWDAVSGLGSPNFPVLSQLLLNVEDVLSDTKVLANVPPLSNQQMQEDASGSVKTLVGASVAALVAAVAVAAAAVVYVKR 677          
BLAST of mRNA_M-pyrifera_M_contig104327.919.1 vs. uniprot
Match: A0A024TKV0_9STRA (Subtilisin n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TKV0_9STRA)

HSP 1 Score: 130 bits (327), Expect = 7.530e-32
Identity = 71/154 (46.10%), Postives = 90/154 (58.44%), Query Frame = 1
Query:    1 PDAALFSRQGRAYPDVSALAHNFPVFLRGRWSLIHGTYASAPVVAALISLINDARLMADKPTLGFLNPWLYSAASNHPDAFTDVVVGENACAVNE-LACCPSSFHARAGWDPVTGLGTLNFAALRNLALN-EDQLILTAAPL---VRNNDNGHD 447
            P +  F+  GRAYPDV+A  +N+ V L G   L+ GT AS+PV AA+I+L+ND RL A KP LGFLNP LY     +P AF D+ +G NA  +      C  +FHA +GWD  +GLG+ NF  L  L LN ED L     P+   V   DN  D
Sbjct:  498 PPSDFFNASGRAYPDVTAFGNNYQVMLNGATGLVSGTSASSPVFAAMITLVNDLRLNAGKPPLGFLNPTLYLLQQRYPLAFNDITIGTNAAGMGSGKPVCDFAFHAESGWDAASGLGSPNFPVLSQLLLNVEDALKDGGVPMPSVVAQTDNTSD 651          
BLAST of mRNA_M-pyrifera_M_contig104327.919.1 vs. uniprot
Match: A0A6G0WJL7_9STRA (Subtilisin n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJL7_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.100e-31
Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 1
Query:    1 PDAALFSRQGRAYPDVSALAHNFPVFLRGRWSLIHGTYASAPVVAALISLINDARLMADKPTLGFLNPWLYSAASNHPDAFTDVVVGENACAVNE-LACCPSSFHARAGWDPVTGLGTLNFAALRNLALNEDQLI 402
            P +  F+  GRAYPDVS + ++F +F++G  +LI GT AS PV A++++L+ND RL A KP LGF+NP LY     +P AF D+ VG NA  +      C  SFHA +GWD  +G+G+ NFA L  L  N ++++
Sbjct:  470 PPSNFFNASGRAYPDVSMIGNSFRIFVKGATTLISGTSASTPVFASVLTLVNDKRLNAGKPPLGFVNPALYKIYEKYPQAFHDITVGTNAAGMGPGRPVCTHSFHAESGWDAASGIGSPNFAVLSQLLFNVEEIL 604          
BLAST of mRNA_M-pyrifera_M_contig104327.919.1 vs. uniprot
Match: A0A485LG53_9STRA (Subtilisin n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LG53_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.470e-31
Identity = 64/135 (47.41%), Postives = 89/135 (65.93%), Query Frame = 1
Query:    1 PDAALFSRQGRAYPDVSALAHNFPVFLRGRWSLIHGTYASAPVVAALISLINDARLMADKPTLGFLNPWLYSAASNHPDAFTDVVVGENACAVN-ELACCPSSFHARAGWDPVTGLGTLNFAALRNLALNEDQLI 402
            P +  F+  GRAYPDV+A  ++F V ++G  SLI GT AS+PV A++I+L+ND RL A KP LGF+NP LY   + +P AF D+VVG NA ++      C  SFHA  GWD V+GLG+ NF  L  L  + ++++
Sbjct:  482 PPSTFFNASGRAYPDVTAFGNSFLVVVKGVTSLISGTSASSPVFASMITLVNDMRLNAGKPPLGFVNPALYKIQAMYPHAFNDIVVGTNAASMGIGKPVCEDSFHAERGWDAVSGLGSPNFQVLSQLLFDIEEVL 616          
BLAST of mRNA_M-pyrifera_M_contig104327.919.1 vs. uniprot
Match: A0A8H6X1M8_9AGAR (Peptidase S53 domain-containing protein n=1 Tax=Mycena kentingensis (nom. inval.) TaxID=1325293 RepID=A0A8H6X1M8_9AGAR)

HSP 1 Score: 127 bits (319), Expect = 5.860e-31
Identity = 67/123 (54.47%), Postives = 81/123 (65.85%), Query Frame = 1
Query:   13 LFSRQGRAYPDVSALAHNFPVFLRGRWSLIHGTYASAPVVAALISLINDARLMADKPTLGFLNPWLYSAASNHPDAFTDVVVGENACAVNELACCPSSFHARAGWDPVTGLGTLNFAALRNLA 381
            LF+R GRA+PDVSA ++NF +F+ G   LI GT ASAP  AAL++L+NDARL   KP LGFLNPWLYS A++      D+V G N        C    F+A  GWDPVTGLGT NF  L +LA
Sbjct:  477 LFNRSGRAFPDVSAQSYNFRIFVDGTPHLIGGTSASAPAFAALVALLNDARLRTGKPPLGFLNPWLYSNAAS---GLNDIVTGSNP------GCGTQGFNASVGWDPVTGLGTPNFGRLLDLA 590          
BLAST of mRNA_M-pyrifera_M_contig104327.919.1 vs. uniprot
Match: A0A6H5KDP6_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KDP6_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 7.390e-31
Identity = 76/191 (39.79%), Postives = 103/191 (53.93%), Query Frame = 1
Query:    1 PDAALFSRQGRAYPDVSALAHNFPVFLRGRWSLIHGTYASAPVVAALISLINDARLMADKPTLGFLNPWLYSAASNHPDAFTDVV--------------------VGENACAVNELACCPSSFHAR--AGWDPVTGLGTLNFAALRNLALNEDQLILTAAPLVRNNDNGHDHHHTSVPLAPVIIVFALLAA 507
            PDA LF+   R +PD+SA+ HNF V + GR   + GT ASAP +A ++SL+N+  L A KP LGFLNP LY AA +   AF +++                    VG N C  +  +CC   +      GWDPVTGLGT+N+ AL +  LN    I  + P  +    GHD HH +     V++VF L+AA
Sbjct:  703 PDAGLFNSTNRGFPDISAVGHNFVVVIDGRVEQVGGTSASAPALAGMVSLMNERLLAAGKPPLGFLNPALYKAAEDSSSAFQEILPKTYNLTGTPLEKTVGAYYQVGSNKC--SRYSCCELGYGGSETGGWDPVTGLGTINYQALSDF-LN----IPRSPPRPQPRGGGHDRHHAAYIAWIVVLVFGLIAA 886          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104327.919.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3L6V5Q5_9STRA2.470e-3443.32Subtilisin (Fragment) n=1 Tax=Aphanomyces astaci T... [more]
A0A2P6NR90_9EUKA9.240e-3352.34Peptidase S53 domain-containing protein n=1 Tax=Pl... [more]
A0A0P1ACG2_PLAHL5.260e-3244.44Subtilisin n=1 Tax=Plasmopara halstedii TaxID=4781... [more]
T0SBH8_SAPDV5.300e-3246.36Subtilisin n=2 Tax=Saprolegnia TaxID=4769 RepID=T0... [more]
W4FSS2_9STRA7.350e-3243.32Subtilisin n=5 Tax=Aphanomyces astaci TaxID=112090... [more]
A0A024TKV0_9STRA7.530e-3246.10Subtilisin n=3 Tax=Aphanomyces invadans TaxID=1570... [more]
A0A6G0WJL7_9STRA2.100e-3145.19Subtilisin n=1 Tax=Aphanomyces euteiches TaxID=100... [more]
A0A485LG53_9STRA3.470e-3147.41Subtilisin n=1 Tax=Aphanomyces stellatus TaxID=120... [more]
A0A8H6X1M8_9AGAR5.860e-3154.47Peptidase S53 domain-containing protein n=1 Tax=My... [more]
A0A6H5KDP6_9PHAE7.390e-3139.79Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104327contigM-pyrifera_M_contig104327:107..643 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score132.1
Seed ortholog evalue2.6e-28
Seed eggNOG ortholog112098.XP_008604201.1
KEGG koko:K01279,ko:K20756
KEGG Pathwayko04142,map04142
Hectar predicted targeting categoryother localisation
EggNOG free text desc.tripeptidyl-peptidase activity
EggNOG OGs2QR6D@2759,COG4934@1
EC3.4.14.9,3.4.21.103
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03110,ko04147
Exons1
Model size537
Cds size537
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815549.6231236-CDS-M-pyrifera_M_contig104327:106..6431622815549.6231236-CDS-M-pyrifera_M_contig104327:106..643Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104327 107..643 -
1692277459.2120984-CDS-M-pyrifera_M_contig104327:106..6431692277459.2120984-CDS-M-pyrifera_M_contig104327:106..643Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104327 107..643 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104327.919.1prot_M-pyrifera_M_contig104327.919.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104327 107..643 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104327.919.1

>prot_M-pyrifera_M_contig104327.919.1 ID=prot_M-pyrifera_M_contig104327.919.1|Name=mRNA_M-pyrifera_M_contig104327.919.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp
PDAALFSRQGRAYPDVSALAHNFPVFLRGRWSLIHGTYASAPVVAALISL
INDARLMADKPTLGFLNPWLYSAASNHPDAFTDVVVGENACAVNELACCP
SSFHARAGWDPVTGLGTLNFAALRNLALNEDQLILTAAPLVRNNDNGHDH
HHTSVPLAPVIIVFALLAAAAIAVVFVVR
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mRNA from alignment at M-pyrifera_M_contig104327:107..643-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104327.919.1 ID=mRNA_M-pyrifera_M_contig104327.919.1|Name=mRNA_M-pyrifera_M_contig104327.919.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=537bp|location=Sequence derived from alignment at M-pyrifera_M_contig104327:107..643- (Macrocystis pyrifera P11B4 male)
CCGGACGCCGCCCTGTTCTCCCGCCAAGGCAGGGCGTATCCGGACGTGAG CGCGCTCGCCCACAACTTCCCCGTCTTCCTCCGCGGCCGGTGGTCGCTCA TCCACGGCACCTACGCCTCCGCGCCCGTCGTCGCCGCCCTCATCTCGCTC ATCAACGACGCCCGGCTCATGGCCGACAAGCCCACCCTCGGCTTCCTCAA CCCGTGGCTGTACTCCGCCGCCAGCAACCACCCGGACGCGTTCACCGACG TGGTCGTCGGCGAGAACGCCTGCGCCGTCAACGAGCTGGCCTGCTGCCCC TCCTCCTTCCACGCGCGCGCTGGATGGGACCCCGTCACCGGCCTCGGCAC CCTCAACTTTGCCGCGCTGCGCAACCTGGCGCTGAACGAGGACCAGCTCA TCCTCACCGCCGCGCCGCTGGTGAGGAACAACGACAACGGCCACGACCAC CACCACACCAGCGTCCCGCTCGCTCCCGTCATCATCGTCTTCGCCCTCCT CGCCGCCGCCGCCATCGCAGTAGTCTTTGTTGTGCGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig104327:107..643-

>mRNA_M-pyrifera_M_contig104327.919.1 ID=mRNA_M-pyrifera_M_contig104327.919.1|Name=mRNA_M-pyrifera_M_contig104327.919.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig104327:107..643- (Macrocystis pyrifera P11B4 male)
CCGGACGCCGCCCTGTTCTCCCGCCAAGGCAGGGCGTATCCGGACGTGAG
CGCGCTCGCCCACAACTTCCCCGTCTTCCTCCGCGGCCGGTGGTCGCTCA
TCCACGGCACCTACGCCTCCGCGCCCGTCGTCGCCGCCCTCATCTCGCTC
ATCAACGACGCCCGGCTCATGGCCGACAAGCCCACCCTCGGCTTCCTCAA
CCCGTGGCTGTACTCCGCCGCCAGCAACCACCCGGACGCGTTCACCGACG
TGGTCGTCGGCGAGAACGCCTGCGCCGTCAACGAGCTGGCCTGCTGCCCC
TCCTCCTTCCACGCGCGCGCTGGATGGGACCCCGTCACCGGCCTCGGCAC
CCTCAACTTTGCCGCGCTGCGCAACCTGGCGCTGAACGAGGACCAGCTCA
TCCTCACCGCCGCGCCGCTGGTGAGGAACAACGACAACGGCCACGACCAC
CACCACACCAGCGTCCCGCTCGCTCCCGTCATCATCGTCTTCGCCCTCCT
CGCCGCCGCCGCCATCGCAGTAGTCTTTGTTGTGCGCCCGGACGCCGCCC
TGTTCTCCCGCCAAGGCAGGGCGTATCCGGACGTGAGCGCGCTCGCCCAC
AACTTCCCCGTCTTCCTCCGCGGCCGGTGGTCGCTCATCCACGGCACCTA
CGCCTCCGCGCCCGTCGTCGCCGCCCTCATCTCGCTCATCAACGACGCCC
GGCTCATGGCCGACAAGCCCACCCTCGGCTTCCTCAACCCGTGGCTGTAC
TCCGCCGCCAGCAACCACCCGGACGCGTTCACCGACGTGGTCGTCGGCGA
GAACGCCTGCGCCGTCAACGAGCTGGCCTGCTGCCCCTCCTCCTTCCACG
CGCGCGCTGGATGGGACCCCGTCACCGGCCTCGGCACCCTCAACTTTGCC
GCGCTGCGCAACCTGGCGCTGAACGAGGACCAGCTCATCCTCACCGCCGC
GCCGCTGGTGAGGAACAACGACAACGGCCACGACCACCACCACACCAGCG
TCCCGCTCGCTCCCGTCATCATCGTCTTCGCCCTCCTCGCCGCCGCCGCC
ATCGCAGTAGTCTTTGTTGTGCGC
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