mRNA_M-pyrifera_M_contig104217.905.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104217.905.1 vs. uniprot
Match: A0A7S4MPE1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MPE1_9EUKA) HSP 1 Score: 139 bits (351), Expect = 1.070e-36 Identity = 71/208 (34.13%), Postives = 115/208 (55.29%), Query Frame = 1 Query: 1 RKSVPNGYWKDPANRKRFLEGVAKEMGVEKLEDWGKVTSSDVLKLGGGAVLNEFKGSLFLALQDAFGGHI-TRDDCRSRKELGHWTSPANRRAFLDQLGERFDVKKPSDWRRVTTKDLLAEGGGGLLQHYSSFWAALKDTYKDDYPSCAWRAEECRSVMPRDFWKTDDNVPAFVEKVREELRVEKKEDWYRVSYEQLNELGGSALLKR 621 R+ VP YWKD N++RF + AK+ + DW ++ + GGG++L + SL AL+ + H + R+R G+W N+R D++ E+ ++ P+DW +++ D+ +EGG +L YSS ++AL+ Y P W R P+++W DNV FV + E +++ EDWYR+S EQ++ GGSAL+KR Sbjct: 116 RRIVPQNYWKDIRNQRRFFDEFAKQQNITGPGDWSNISYDQLASAGGGSLL-KLHSSLSSALEAVYPEHDWNKYRVRTRHPAGYWEDVRNQRKVFDKIAEKHEISCPTDWAKLSYNDVQSEGGWPVLSRYSSLYSALETIY----PEYEWNFHTSRLRGPQNYWDCFDNVKKFVNHLTETHCIKQDEDWYRLSLEQIHAAGGSALMKR 318
BLAST of mRNA_M-pyrifera_M_contig104217.905.1 vs. uniprot
Match: A0A7S4MPF2_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MPF2_9EUKA) HSP 1 Score: 130 bits (328), Expect = 1.550e-33 Identity = 64/206 (31.07%), Postives = 113/206 (54.85%), Query Frame = 1 Query: 4 KSVPNGYWKDPANRKRFLEGVAKEMGVEKLEDWGKVTSSDVLKLGGGAVLNEFKGSLFLALQDAFGGHITRDDCRSRKELGHWTSPANRRAFLDQLGERFDVKKPSDWRRVTTKDLLAEGGGGLLQHYSSFWAALKDTYKDDYPSCAWRAEECRSVMPRDFWKTDDNVPAFVEKVREELRVEKKEDWYRVSYEQLNELGGSALLKR 621 K P+ +W +N++ F + A++ +E+ DW VT + V+ GGG +L ++ SL AL+ + H + R+R HW + N+R F D+ + ++ PSDW +T D++ EGG +L YSS ++AL Y P W R+ +P++ W N+ AF+++ + + + EDWYR+S++Q+ + GG+ L K+ Sbjct: 87 KRKPHRFWVSLSNQRDFFDQFARKHKLEQPGDWRNVTYTQVVNEGGGNILQQYS-SLLAALEAIYPEHKW-NHIRTRVPRKHWYNINNQRKFFDEFAAKRSIRHPSDWNNITYLDIVNEGGKSILNQYSSLFSALAAIY----PELEWNIYTSRTQVPKNHWNDIGNIKAFIKQFEKSHNITQDEDWYRISFKQIQQAGGNTLTKK 286
BLAST of mRNA_M-pyrifera_M_contig104217.905.1 vs. uniprot
Match: A0A7S4I3D5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I3D5_9EUKA) HSP 1 Score: 129 bits (325), Expect = 4.130e-33 Identity = 68/209 (32.54%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 1 RKSVPNGYWKDPANRKRFLEGVAKEMGVEKLEDWGKVTSSDVLKLGGGAVLNEFKGSLFLALQDAFGGHITRDDCRSRKEL--GHWTSPANRRAFLDQLGERFDVKKPSDWRRVTTKDLLAEGGGGLLQHYSSFWAALKDTYKDDYPSCAWRAEECRSVMPRDFWKTDDNVPAFVEKVREELRVEKKEDWYRVSYEQLNELGGSALLKR 621 RK P YW N++ F + A++ +++ DW + V + GG ++L + SLF AL+ + H D ++RK++ HW SP +R F D ++++ PSDW +VT + + EGG +L HY S +AAL++ Y P W + R ++P +W +N F+++ ++ + K EDW ++Y+QL E GG ALL R Sbjct: 63 RKRKPRYYWHSLDNQRDFFDQFAQKHDIKQPSDWKHIKYRQVKEEGGESILKLYS-SLFTALKAIYPEHEW-DVQQTRKQIPNNHWKSPEKQREFFDLFARKYNLIHPSDWSKVTYQQVCQEGGRSILSHYKSLFAALENIY----PEREWDLKTTRKLLPAGYWNKLENQREFLDRFAQQHNINKAEDWKHITYQQLAESGGKALLNR 265
BLAST of mRNA_M-pyrifera_M_contig104217.905.1 vs. uniprot
Match: A0A7S4INM6_9EUKA (Hypothetical protein n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4INM6_9EUKA) HSP 1 Score: 130 bits (326), Expect = 1.130e-32 Identity = 68/212 (32.08%), Postives = 114/212 (53.77%), Query Frame = 1 Query: 1 RKSVPNGYWKDPANRKRFLEGVAKEMGVEKLEDWGKVTSSDVLKLGGGAVLNEFKGSLFLALQDAFGGHITRD-----DCRSRKELGHWTSPANRRAFLDQLGERFDVKKPSDWRRVTTKDLLAEGGGGLLQHYSSFWAALKDTYKDDYPSCAWRAEECRSVMPRDFWKTDDNVPAFVEKVREELRVEKKEDWYRVSYEQLNELGGSALLKR 621 R PN YW+ N++ F + A+ +++ DW K+T S VL GGG++L + +L+DA + + +SR HW S N+R F ++ + ++K PSDW +V+ + ++ GGG +L+ YSS +AL + P W R++ P+ FW DN FV + +E ++++ +DWYRVS Q ++ GG+AL +R Sbjct: 28 RSRAPNNYWESLENQRHFFDEFARRYHIKEPGDWSKITYSMVLHDGGGSILQRYS-----SLRDALHAVYPENKEIGLEIKSRAPNHHWKSLENQRQFFNEFTTKHNIKSPSDWSKVSYRQVVDAGGGSILREYSSLLSALATIF----PEQQWDIST-RTIAPKHFWIDVDNAKDFVSQFKELYQIKQDKDWYRVSLAQFHQAGGAALARR 229
BLAST of mRNA_M-pyrifera_M_contig104217.905.1 vs. uniprot
Match: A0A7S4INM7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4INM7_9EUKA) HSP 1 Score: 122 bits (305), Expect = 4.710e-29 Identity = 64/209 (30.62%), Postives = 108/209 (51.67%), Query Frame = 1 Query: 1 RKSVPNGYWKDPANRKRFLEGVAKEMGVEKLEDWGKVTSSDVLKLGGGAVLNEFKGSLFLALQDAFGGHI-TRDDCRSRKELGHWTSPANRRAFLDQLGERFDVKKPSDWRRVTTKDLLAEGGGGLLQHYSSFWAALKDTYKDDYPSCAWRAEECRSVMPRDFWKTDDNVPAFVEKVREELRVEKKEDWYRVSYEQLNEL-GGSALLKR 621 R VPN YW D N+++F + A++ +++L DW VT V GG +L ++ SL AL+ + R+ R+R +W + +R F D+ R ++ P DW VT + GG +L Y + +A + Y P W ++ PR++W +NV F++ ++E +E EDWYR+S +Q+ ++ GG+AL K+ Sbjct: 121 RTRVPNNYWNDIGNQRKFFDDYAEKHNIKELSDWATVTYRKVANEGGRPILKQYS-SLLSALETIYPEQTWKRNLIRTRAPNSYWKNIKRQRKFFDEFAARHNINGPKDWANVTHAQIANSGGRSILAEYPTLLSAFQALY----PEYDWDIKDIGIQAPRNYWNDLNNVKQFLQHIKELYAIELDEDWYRISTKQIQQVFGGNALTKK 324
BLAST of mRNA_M-pyrifera_M_contig104217.905.1 vs. uniprot
Match: A0A7S4HU05_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HU05_9EUKA) HSP 1 Score: 106 bits (265), Expect = 1.150e-24 Identity = 58/173 (33.53%), Postives = 87/173 (50.29%), Query Frame = 1 Query: 1 RKSVPNGYWKDPANRKRFLEGVAKEMGVEKLEDWGKVTSSDVLKLGGGAVLNEFKGSLFLALQDAFGGHITRD-DCRSRKELGHWTSPANRRAFLDQLGERFDVKKPSDWRRVTTKDLLAEGGGGLLQHYSSFWAALKDTYKDDYPSCAWRAEECRSVMPRDFWKTDDNVPAF 516 R VPN YW+ N+++F + A + DW KV V + GG ++L + SL ALQ ++ + D ++R +W N+R FLD + ++++PSDW RVT ++ EGGG LL+ Y S AAL+ Y P W RS +P+ +WK N F Sbjct: 90 RNRVPNNYWEQVENQRKFFDEFAVRHSITSYNDWTKVAYQKVSEEGGRSILKLYP-SLLSALQASYPEYNWNPKDFKTRAPNHYWEDMENQRKFLDDFARKHELREPSDWSRVTYWQIVDEGGGTLLKQYPSLVAALEAIY----PEFEWDISTTRSHVPQSYWKDPSNQRKF 257
BLAST of mRNA_M-pyrifera_M_contig104217.905.1 vs. uniprot
Match: A0A088CQF9_9ZZZZ (Uncharacterized protein n=1 Tax=uncultured soil microorganism TaxID=1457551 RepID=A0A088CQF9_9ZZZZ) HSP 1 Score: 108 bits (269), Expect = 3.170e-24 Identity = 59/203 (29.06%), Postives = 98/203 (48.28%), Query Frame = 1 Query: 10 VPNGYWKDPANRKRFLEGVAKEMGVEKLEDWGKVTSSDVLKLGGGAVLNEFKGSLFLALQDAFGGHITRDDCRSRKELGHWTSPANRRAFLDQLGERFDVKKPSDWRRVTTKDLLAEGGGGLLQHYSSFWAALKDTYKDDYPSCAWRAEECRSVMPRDFWKTDDNVPAFVEKVREELRVEKKEDWYRVSYEQLNELGGSALLK 618 VP G+W+ NR R++E + +++G + E+W +VT D + GG + ++F+ S LQ F + ++ W PANRR +LD LG++ + P DW ++ + L GG LL + A+ Y YP WR + +P +FW N ++ L++ EDWYR++ + GG L+K Sbjct: 26 VPPGFWELAENRLRYVEWLGEQLGFTQREEWYRVTGRDFQRHYGGGLFSKFQSSPSALLQAVFPRYDWKEWLFGSAPQRFWQKPANRRRYLDWLGQQLGFQHPEDWYLLSAQHLRRWHGGCLLAQFGGSPLAVVKAYLPRYPWQEWRF----ASLPANFWHDPANRHRYLSWFGRHLKLRHPEDWYRLNNRDFIQQGGQGLVK 224
BLAST of mRNA_M-pyrifera_M_contig104217.905.1 vs. uniprot
Match: A0A7S4INN1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4INN1_9EUKA) HSP 1 Score: 107 bits (266), Expect = 2.350e-23 Identity = 59/205 (28.78%), Postives = 94/205 (45.85%), Query Frame = 1 Query: 10 VPNGYWKDPANRKRFLEGVAKEMGVEKLEDWGKVTSSDVLKLGGGAVLNEFKGSLFLALQDAFGGHITR-DDCRSRKELGHWTSPANRRAFLDQLGERFDVKKPSDWRRVTTKDLLAEGGGGLLQHYSSFWAALKDTYKDDYPSCAWRAEECRSVMPRDFWKTDDNVPAFVEKVREELRVEKKEDWYRVSYEQLNELGGSALLKR 621 V +W N++ F + A G+E DW VT + + GG +L ++ SL AL + H +D + R L HW N+R F D ++ + PSDW+ VT K ++ +GG +LQ Y S +AL+ Y P W R+ +P+ W +N F + + DW ++Y Q+ GG +L+R Sbjct: 244 VHRSFWTHLENQREFFDSFAAIHGIEHPSDWSAVTKKLIEREGGRPILKQYP-SLHSALLSVYPEHEEIFNDSKFRMPLLHWQDMKNQRQFFDNFAKKNGITHPSDWKHVTQKQVIQQGGSLILQQYPSLISALEAIY----PEYEWNVTVSRARIPQKHWNDKENQRKFFDSFAANHNITVPSDWSHITYTQVINAGGRPILQR 443
BLAST of mRNA_M-pyrifera_M_contig104217.905.1 vs. uniprot
Match: A0A7T5CIA4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7T5CIA4_9BACT) HSP 1 Score: 96.7 bits (239), Expect = 2.590e-20 Identity = 55/203 (27.09%), Postives = 97/203 (47.78%), Query Frame = 1 Query: 10 VPNGYWKDPANRKRFLEGVAKEMGVEKLEDWGKVTSSDVLKLGGGAVL-NEFKGSLFLALQDAFGGHITRDDCRSRKELGHWTSPANRRAFLDQLGERFDVKKPSDWRRVTTKDLLAEGGGGLLQHYSSFWAALKDTYKDDYPSCAWRAEECRSVMPRDFWKTDDNVPAFVEKVREELRVEKKEDWYRVSYEQLNELGGSALL 615 P +W+DP NR+ ++ + K++G K +DW +T GG +L N ++ S A+++ + W + NR ++D L + ++KP DW RVT KD G L+ ++ ++ ++ ++ P W+ V P +WKT N A+V+ + L +K DWY+++ E + GG ALL Sbjct: 90 TPQAFWRDPKNRRAYMNWLGKQLGFTKQDDWYALTQQHFRDNGGNGLLANYYRNSPVDAVREFKPNRKWNEWQFHATPQRFWKNKKNRTRYMDWLSKALKIRKPEDWYRVTRKDFYDNYGAVFLKSFAD--SSPQEALREYMPKFKWKPWLFTRV-PNGYWKTPKNRIAYVKWLGAMLGYKKPADWYQLTREDVKASGGGALL 289
BLAST of mRNA_M-pyrifera_M_contig104217.905.1 vs. uniprot
Match: A0A7S4I2I6_9EUKA (Hypothetical protein n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I2I6_9EUKA) HSP 1 Score: 95.1 bits (235), Expect = 3.800e-19 Identity = 55/193 (28.50%), Postives = 97/193 (50.26%), Query Frame = 1 Query: 4 KSVPNGYWKDPANRKRFLEGVAKEMGVEKLEDWGKVTSSDVLKLGGGAVLNEFKGSLFLALQDAFGG-HITRDDCRSRKELGHWTSPANRRAFLDQLGERFDVKKPSDWRRVTTKDLLAEGGGGLLQHYSSFWAAL-KDTYKDDYPSCAWRAEECRSVMPRDFWKTDDNVPAFVEKVREELRVEKKEDWYRVS 576 + P +WKD N + F+E + +E + + W ++T V K GG A+ +F+ L LQ A+ + RSR +W P NR++FL ++ +F+++ +DW+ V KD+ GG L Y SF L K+ + + R P FW T +N+ ++++ ++L VE+ +DW ++S Sbjct: 91 RKYPVNHWKDQQNIRAFMERIKQEYNIREDSGWKEITWGHVTKHGGRALREKFRSFPEL-LQAAYPEKQFETQEIRSRMPYNYWECPENRKSFLQEIINKFNIQTSADWKNVRAKDIRDMGGAPFLARYGSFDNMLRKEVFSGQEEENINSIFQYRKRAPPGFW-TLENIRISMDELGKKLGVEELDDWLQIS 281 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104217.905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104217.905.1 >prot_M-pyrifera_M_contig104217.905.1 ID=prot_M-pyrifera_M_contig104217.905.1|Name=mRNA_M-pyrifera_M_contig104217.905.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp RKSVPNGYWKDPANRKRFLEGVAKEMGVEKLEDWGKVTSSDVLKLGGGAVback to top mRNA from alignment at M-pyrifera_M_contig104217:24..644- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104217.905.1 ID=mRNA_M-pyrifera_M_contig104217.905.1|Name=mRNA_M-pyrifera_M_contig104217.905.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=621bp|location=Sequence derived from alignment at M-pyrifera_M_contig104217:24..644- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104217:24..644- >mRNA_M-pyrifera_M_contig104217.905.1 ID=mRNA_M-pyrifera_M_contig104217.905.1|Name=mRNA_M-pyrifera_M_contig104217.905.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig104217:24..644- (Macrocystis pyrifera P11B4 male)back to top |