mRNA_M-pyrifera_M_contig104135.893.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104135.893.1 vs. uniprot
Match: A0A5A8E390_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E390_CAFRO) HSP 1 Score: 173 bits (438), Expect = 2.950e-46 Identity = 100/221 (45.25%), Postives = 122/221 (55.20%), Query Frame = 1 Query: 55 ISMERPVQSGWRAEDVGEETESWTITRHDSHLSRREQYVRSGHAGLVFGDGAPHRRFFSDIKTRTPSGDHNVTRGKILAGQLMFVPSSNPPLSLISRANTVANPNNPSASVHAAPSSPRLSTTGSG--GYG--------DGDVWNRGEVGGSGRYFWYVEHDA--PGFEGR---------------------SRGGVCGCSTNDFITWKNEGVMFHFENIS 618 + M RPVQSGW D+GE++ W ITRH++H+SRR Y H G+VFGDGAPHRRF DIKT GDHN T G I A ++FVP +PP L++RA T A A+ RLS + G GYG DG G G +GRY+WY EHD+ PG GR SRGGV CSTND + W+NEG+M+ FENIS Sbjct: 1212 LRMSRPVQSGWLLSDIGEDSFDWEITRHENHVSRRPVYTHESHGGIVFGDGAPHRRFHRDIKTVAADGDHNATHGAIHAAAMLFVPGDSPPRDLLARAMTTAGSMRGEWGA-ASTEQARLSDSQGGREGYGSIQSIDGRDGFGGPPGFGGLTGRYYWYGEHDSITPGLAGRDVSHLIPPSQAENDGLQHPLVSRGGVAACSTNDLLVWRNEGIMYRFENIS 1431
BLAST of mRNA_M-pyrifera_M_contig104135.893.1 vs. uniprot
Match: A0A7S2GBC0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GBC0_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.180e-27 Identity = 72/206 (34.95%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 28 DRVEFAAAKIS-----MERPVQSGWRAEDVGEETESWTITRHDSHLSRREQYVRSGHAGLVFGDGAPHRRFFSDIKTRTPSGDHNVTRGKILAGQLMFVPSSNPPLSLISRANTVANPNNPSASVHAAPSSPRLSTTGSGGYGDGDVWNRG----EVGGSGRYFWYVEHDAPGFEGRSRGGVCGCSTNDFITWKNEGVMFHFENIS 618 D ++F A +++ M+RP+Q+GW+AED+GE + + + RH SH+++R+ Y + GLV DG HR F SDI+ R +GD + G + AG L++V + + T ++ +A+ H PS+ R G GDG G + G SG Y+WY EH GG+ ST+D +TW+NEG+M H+ NI+ Sbjct: 370 DTMDFRAPEVTRRGVKMDRPMQTGWKAEDIGERSYNHPMQRHVSHITKRDIYDYNN-GGLVPFDGDGHRAFNSDIRQRFANGDRHEKMGGLKAGALLYVAGTKVSDETLRTVVTSQTVDHATAADHVLPSA-RHQAWSFGARGDGATDLNGNHNADAGSSGTYYWYGEHSFKAGAAHELGGIACASTDDLVTWRNEGIMLHYANIT 573
BLAST of mRNA_M-pyrifera_M_contig104135.893.1 vs. uniprot
Match: A0A8K1CG07_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG07_PYTOL) HSP 1 Score: 76.6 bits (187), Expect = 1.090e-12 Identity = 53/190 (27.89%), Postives = 89/190 (46.84%), Query Frame = 1 Query: 55 ISMERPVQSGWRAEDVGEETESWTITRHDSHLSRREQYVRSGHAGLVFGDGAPHRRFFSDIKTRTPSGDHNVTRGKILAGQLMFVPSSNPPLSLISRANTVANPNNPSASVHAAPSSPRLSTTGSGGYGDGDVWNRGEVGGSGRYFWYVE--HDAPGFEGRSRGGVCGCSTNDFITWKNEGVMFHFENIS 618 ++ R ++ W AE G T +T+H+SHLS+RE Y L F DGAPHR F +D++ ++ ++ A + + + L +S+ +++ +H + R +T + + G +WY E + A GF GGV CST ++I W+NEG+M HF N++ Sbjct: 940 VTKTRSLRKLWPAESRGPATTYHPMTKHESHLSKREVYQYDSGGMLPF-DGAPHRAFLNDVRETESELQDGTSQEELNANEEVITQAETLTLQDVSQDSSIVLSLETGMDLHTLAADQRGTTR--------TIQSHGPT-----IYWYSEIYNTATGF-----GGVGACSTLNYIDWRNEGIMLHFVNLT 1110
BLAST of mRNA_M-pyrifera_M_contig104135.893.1 vs. uniprot
Match: A0A485LP40_9STRA (Aste57867_23574 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LP40_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.600e-10 Identity = 55/179 (30.73%), Postives = 78/179 (43.58%), Query Frame = 1 Query: 85 WRAEDVGEETESWTITRHDSHLSRREQYVRSGHAGLVFGDGAPHRRFFSDIKTRTPSGDHNVTRGKILAGQLMFVPSSNPPLSLISRANTVANPNNPSASVHAAPSSPRLSTTGSGGYGDGDVWNRGEVGGSGRYFWYVEHDAPGFEGRSRGGVCG-CSTNDFITWKNEGVMFHFENIS 618 W + VG T+ H+SHLS+R Y + H GLV DG HR +F+DI T N +G+I G+ + V S +P +S++ N S PS + FWY E + GG G CST DF+TW+NEG+M H+ N++ Sbjct: 814 WNSNVVGPVTKFAPKISHESHLSKRPVY-QYNHGGLVPNDGPSHRTYFNDIADPTVYDPTN-DQGQIAQGEFLQV-SISPDVSMVLPLEN--NVEGVSTQETTMPSETQ--------------------------FWYSEIQVLDSQNNVIGGGIGACSTTDFVTWRNEGIMLHYTNLT 961
BLAST of mRNA_M-pyrifera_M_contig104135.893.1 vs. uniprot
Match: A0A7S0SXR7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXR7_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 8.870e-10 Identity = 55/196 (28.06%), Postives = 90/196 (45.92%), Query Frame = 1 Query: 67 RPVQSGWRAEDV-GEETESWTI----TRHDSHLSRREQYVRSGHAGLVFGDGAPHRRFFSDIKTRTPSGDHNVTRGKILAGQLMFVPSS-NPPLSLISRANTVANPNN-----PSASVHAAPSSPRLSTTGSGGYGDGDVWNRGEVGGSGRYFWYVEHDAPGFEGRS-RGGVCGCSTNDFITWKNEGVMFHFENIS 618 +P+Q W ++V G ++ +T+ RH +HL G V DG + DIK + GD+ +++GK+ AG L+++ +S + R++T+ +PN P +V GG GDG RYF+Y+E+ S GG+ CS D +W+ EG++FH+ NIS Sbjct: 1525 QPIQRAWSFDEVHGGDSNGYTVYKKMMRHYNHLDT---------TGSVPFDGQGAVEDYQDIKLQYSDGDYPLSQGKLHAGALLYITNSLRSAKTPTGRSSTLVSPNGLWYQPPDGTVK-------------GGAGDG------------RYFYYIEYSYNSTLTSSLSGGIAACSAQDLTSWRFEGIVFHYSNIS 1686
BLAST of mRNA_M-pyrifera_M_contig104135.893.1 vs. uniprot
Match: A0A6G0WAG8_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAG8_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.820e-8 Identity = 53/179 (29.61%), Postives = 79/179 (44.13%), Query Frame = 1 Query: 85 WRAEDVGEETESWTITRHDSHLSRREQYVRSGHAGLVFGDGAPHRRFFSDIKTRTPSGDHNVTRGKILAGQLMFVPSSNPPLSLISRANTVANPNNPSASVHAAPSSPRLSTTGSGGYGDGDVWNRGEVGGSGRYFWYVEHDAPGFEGRS-RGGVCGCSTNDFITWKNEGVMFHFENIS 618 W VG +T+ RH+S +SRR Y + + GLV DG HR +F+DI+ T D V I G+++ + + P S++ T N S A+P+ + FWY E G+ RGG+ CST D TW+NEG+M H+ N++ Sbjct: 830 WNPSIVGPQTQFGPKVRHESQVSRRRLY-QYNNGGLVPNDGPAHRLYFNDIQDSTVY-DRAVDEIHIGMGEIIKIAMA-PDASMVFPLET--NVEGVSTRWTASPAETQ--------------------------FWYSEIQVFDASGQVVRGGIGACSTMDMKTWRNEGIMLHYANLT 977
BLAST of mRNA_M-pyrifera_M_contig104135.893.1 vs. uniprot
Match: W4FFC8_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FFC8_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 3.390e-5 Identity = 44/155 (28.39%), Postives = 69/155 (44.52%), Query Frame = 1 Query: 157 REQYVRSGHAGLVFGDGAPHRRFFSDIKTRTPSGDHNVTRGKILAGQLMFVPSSNPPLSLISRANTVANPNNPSASVHAAPSSPRLSTTGSGGYGDGDVWNRGEVGGSGRYFWYVEHDAPGFEGRSRGGVCG-CSTNDFITWKNEGVMFHFENIS 618 R S + GLV DG HR +F+DI R P D + ++++G+L+ + S +P +S++ T N S++ A P + +WY E + GG G CST D ITW+NEG++ HF N++ Sbjct: 843 RRPVYSSNNGGLVPNDGPGHRVYFNDI--REPVYDAQSDQVELISGELVAI-SISPDVSMVVPLET--NAEGVSSAESALPQQSQ--------------------------YWYSEIQVLNNDSVVVGGGIGACSTTDLITWRNEGIILHFANLT 966
BLAST of mRNA_M-pyrifera_M_contig104135.893.1 vs. uniprot
Match: K0SJH8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SJH8_THAOC) HSP 1 Score: 54.3 bits (129), Expect = 4.490e-5 Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 1 Query: 487 YFWYVEHDAPGFEGRSRGGVCGCSTNDFITWKNEGVMFHFENIS 618 Y WY EHD SRGG+ CST DF++W+ G+M ++EN++ Sbjct: 1002 YVWYGEHDHFDPSNPSRGGIMSCSTRDFVSWEENGIMLNYENVT 1045 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104135.893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104135.893.1 >prot_M-pyrifera_M_contig104135.893.1 ID=prot_M-pyrifera_M_contig104135.893.1|Name=mRNA_M-pyrifera_M_contig104135.893.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp TPLDRERAVDRVEFAAAKISMERPVQSGWRAEDVGEETESWTITRHDSHLback to top mRNA from alignment at M-pyrifera_M_contig104135:4..621- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104135.893.1 ID=mRNA_M-pyrifera_M_contig104135.893.1|Name=mRNA_M-pyrifera_M_contig104135.893.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig104135:4..621- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104135:4..621- >mRNA_M-pyrifera_M_contig104135.893.1 ID=mRNA_M-pyrifera_M_contig104135.893.1|Name=mRNA_M-pyrifera_M_contig104135.893.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig104135:4..621- (Macrocystis pyrifera P11B4 male)back to top |