mRNA_M-pyrifera_M_contig10411.886.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10411.886.1 vs. uniprot
Match: A0A6H5JM75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM75_9PHAE) HSP 1 Score: 102 bits (253), Expect = 2.980e-21 Identity = 55/103 (53.40%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 10 MANPLMTSADIVLHLANFVDDEQYLFFAPVSTTWKNAWGQRPKTTRAVTAHTTIHLLLKSFRSGLQPGGVVCKAAASVGRLDLLHCAR-QNGCPWPDDFFSTA 315 M NPLM DIV L FV EQY+FFA VS TW++AW RP TTRA TA T + L +SF+ GL P VC+ A++GRLDLL AR Q+ CPW ++ S A Sbjct: 1 MPNPLM-QPDIVFRLMEFVGGEQYIFFAGVSRTWRDAWEGRPTTTRAFTADTGVPQLSQSFKCGLAPRSTVCRDIAALGRLDLLVSAREQHECPWDEETCSCA 102
BLAST of mRNA_M-pyrifera_M_contig10411.886.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI) HSP 1 Score: 100 bits (248), Expect = 8.900e-20 Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 10 MANPLMTSADIVLHLANFVDDEQYLFFAPVSTTWKNAWGQRPKTTRAVTAHTTIHLLLKSFRSGLQPGGVVCKAAASVGRLDLLHCARQNGCPWPDD 300 M L + DIV + FVDD QYLFFA VS W++ WG+RP T+A+TA T++ L SF GL+ VC+ A +GRLDLL AR GCPW ++ Sbjct: 1 MEKQLFAAVDIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCPWNEN 97
BLAST of mRNA_M-pyrifera_M_contig10411.886.1 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 1.250e-19 Identity = 46/93 (49.46%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 22 LMTSADIVLHLANFVDDEQYLFFAPVSTTWKNAWGQRPKTTRAVTAHTTIHLLLKSFRSGLQPGGVVCKAAASVGRLDLLHCARQNGCPWPDD 300 L + DIV +A FVDD QYLFFA VS W++ WG+RP T+A+TA T++ L SF GL+ VC+ A +GRLDLL AR GC W ++ Sbjct: 3 LFAAVDIVSTVAEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCQWNEN 95
BLAST of mRNA_M-pyrifera_M_contig10411.886.1 vs. uniprot
Match: D7G8V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V2_ECTSI) HSP 1 Score: 100 bits (250), Expect = 1.430e-19 Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = 1 Query: 22 LMTSADIVLHLANFVDDEQYLFFAPVSTTWKNAWGQRPKTTRAVTAHTTIHLLLKSFRSGLQPGGVVCKAAASVGRLDLLHCARQNGCPW 291 L +D+ L FVD EQ+LFFA V WK AWGQRP TTRAVT TT+ L ++F+ GL VC + A +GRLDLL CAR++GC W Sbjct: 5 LFAQSDVASCLVEFVDYEQFLFFAGVCRAWKEAWGQRPPTTRAVTEDTTVAQLSQNFQCGLSLIADVCTSVAKLGRLDLLQCARRHGCAW 94
BLAST of mRNA_M-pyrifera_M_contig10411.886.1 vs. uniprot
Match: D8LFW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW3_ECTSI) HSP 1 Score: 100 bits (249), Expect = 1.590e-19 Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 1 Query: 1 AEFMANPLMTSADIVLHLANFVDDEQYLFFAPVSTTWKNAWGQRPKTTRAVTAHTTIHLLLKSFRSGLQPGGVVCKAAASVGRLDLLHCARQNGCPW 291 A + NPL + DIV LA+FV DEQ+LFFA VST W+ AWG+RP +TRA+T H T L SF GL+ VC+A A G+L++L AR+ CPW Sbjct: 26 AAAVDNPLDANVDIVRCLADFVHDEQHLFFAGVSTLWREAWGRRPTSTRAITEHVTPSQLCWSFSCGLRKRAEVCEAIAGFGKLEVLKRARELKCPW 122
BLAST of mRNA_M-pyrifera_M_contig10411.886.1 vs. uniprot
Match: D7FWU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWU0_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 4.780e-19 Identity = 47/93 (50.54%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 10 MANPLMTSADIVLHLANFVDDEQYLFFAPVSTTWKNAWGQRPKTTRAVTAHTTIHLLLKSFRSGLQPGGVVCKAAASVGRLDLLHCARQNGCP 288 M NPL ++ +V HL +VD QYLFFA V W AWG+RP TRA T T++ L SF GL+ +C+ AA +GRLDLL CA NGCP Sbjct: 5 MLNPLTSNKTVVNHLMEYVDHNQYLFFATVCRGWSRAWGERPAVTRAATNGTSVSQLSFSFHCGLRRTKGICETAAKLGRLDLLQCAVLNGCP 97
BLAST of mRNA_M-pyrifera_M_contig10411.886.1 vs. uniprot
Match: A0A6H5L0K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K8_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 2.320e-18 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 25 MTSADIVL--HLANFVDDEQYLFFAPVSTTWKNAWGQRPKTTRAVTAHTTIHLLLKSFRSGLQPGGVVCKAAASVGRLDLLHCARQNGCPWPDD 300 + +A++ L +LA FVDD Q+LFFA VS W++ WG+RP T+A+TA T++ L SF GL+ VC+ A +GRLDLL AR GCPW ++ Sbjct: 20 LVTANVYLLSYLAEFVDDNQHLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLQRARAMGCPWNEN 113
BLAST of mRNA_M-pyrifera_M_contig10411.886.1 vs. uniprot
Match: D7G8W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W5_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 4.480e-16 Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 61 FVDDEQYLFFAPVSTTWKNAWGQRPKTTRAVTAHTTIHLLLKSFRSGLQPGGVVCKAAASVGRLDLLHCARQN-GCPWPDDFFSTA 315 FV EQYLFFA VS TW++AW RP TTRAVTA T + L +SF GL VC+ A++GRLDLL AR+ CPW +D S A Sbjct: 3 FVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTADTGVPQLSQSFECGLARRSTVCQDIAALGRLDLLVSAREEYECPWDEDTCSYA 88
BLAST of mRNA_M-pyrifera_M_contig10411.886.1 vs. uniprot
Match: D7FH49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH49_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 1.120e-15 Identity = 48/93 (51.61%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 16 NPLMTSADIVLHLANFVDDEQYLFFAPVSTTWKNAWGQRPKTTRAVTAHTTIHLLLKSFRSGLQPGGVV-CKAAASVGRLDLLHCARQNGCPW 291 N MT+ DIV LA FV D+Q+LFFA VS +W++AWG+R T VT HTT L SF GL GV C A G LDLL A + GCPW Sbjct: 17 NVAMTNMDIVHGLAQFVLDKQFLFFAAVSRSWRDAWGERATVTSWVTPHTTPFQLQYSFACGLARDGVDWCLTTARAGNLDLLRWATEQGCPW 109
BLAST of mRNA_M-pyrifera_M_contig10411.886.1 vs. uniprot
Match: A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 2.060e-12 Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 22 LMTSADIVLHLANFVDDEQYLFFAPVSTTWKNAWGQRPKTTRAVTAHTTIHLLLKSFRSGL-QPGGVVCKAAASVGRLDLLHCARQNGCPWPDDFFSTA 315 L + D++ + FV ++Q+LFFAPVS W+ AWG RP T VT +++ L SF GL + +C A A +G L+LL AR +GC W FS A Sbjct: 57 LADNVDLLRSIVRFVAEKQFLFFAPVSRAWREAWGCRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCAWNGLTFSEA 155 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10411.886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10411.886.1 >prot_M-pyrifera_M_contig10411.886.1 ID=prot_M-pyrifera_M_contig10411.886.1|Name=mRNA_M-pyrifera_M_contig10411.886.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=420bp MANPLMTSADIVLHLANFVDDEQYLFFAPVSTTWKNAWGQRPKTTRAVTAback to top mRNA from alignment at M-pyrifera_M_contig10411:7088..8356- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10411.886.1 ID=mRNA_M-pyrifera_M_contig10411.886.1|Name=mRNA_M-pyrifera_M_contig10411.886.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1269bp|location=Sequence derived from alignment at M-pyrifera_M_contig10411:7088..8356- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10411:7088..8356- >mRNA_M-pyrifera_M_contig10411.886.1 ID=mRNA_M-pyrifera_M_contig10411.886.1|Name=mRNA_M-pyrifera_M_contig10411.886.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2520bp|location=Sequence derived from alignment at M-pyrifera_M_contig10411:7088..8356- (Macrocystis pyrifera P11B4 male)back to top |