mRNA_M-pyrifera_M_contig104107.884.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig104107.884.1 vs. uniprot
Match: A0A2E0RX50_9ACTN (Fe/B12 periplasmic-binding domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RX50_9ACTN) HSP 1 Score: 184 bits (466), Expect = 1.040e-53 Identity = 95/187 (50.80%), Postives = 129/187 (68.98%), Query Frame = 1 Query: 1 DQVGEELLSGIG-EVVVVPDNLDADEQLTVLGELFEREAEAAALISELEAAQLSADEAISDECVVSLATIYGGPSVAAYVEPAWPLPTAIVDAGCTLDPDTSDADPDSNGRAWLSLEQLGLLDAPTLVLFQTSSVEGEDEAIEVVESQPLWPTLPAVASDQIIVFDRLGYPGAAGQIRFLGELEAAL 558 DQVGE+ L+G+G EV V+PD + E++ +LG F REA+A ALI++L+AA A+ D+C VS+A IY G +VAA+ EP W P A+ GCTL P + D D NGRA+LSLEQLGLL APT+VL Q +V+G+ EA+ + + P+W LPAVA+ Q++ DR+GYPG G+IR + EL AL Sbjct: 179 DQVGEKALAGVGAEVHVLPDGTEGPERIALLGGFFGREAQADALIADLDAAYARAEGEAPDDCAVSVAAIYPGANVAAFAEPVWDAPRALARLGCTLVPSGDNVDTDRNGRAYLSLEQLGLLSAPTMVLLQAPAVDGDSEAVAEITANPIWQQLPAVAAGQVVELDRIGYPGVVGEIRLIDELVGAL 365
BLAST of mRNA_M-pyrifera_M_contig104107.884.1 vs. uniprot
Match: A0A4R7I2U5_9ACTN (Iron complex transport system substrate-binding protein n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I2U5_9ACTN) HSP 1 Score: 177 bits (450), Expect = 1.120e-51 Identity = 91/187 (48.66%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 1 DQVGEELLSGIG-EVVVVPDNLDADEQLTVLGELFEREAEAAALISELEAAQLSADEAISDECVVSLATIYGGPSVAAYVEPAWPLPTAIVDAGCTLDPDTSDADPDSNGRAWLSLEQLGLLDAPTLVLFQTSSVEGEDEAIEVVESQPLWPTLPAVASDQIIVFDRLGYPGAAGQIRFLGELEAAL 558 +QVG E L+G+G EV V+PD EQ +LGE F R+A+A L++EL+A ++ + D C VS+A IY G +VA + EP W P+A+ + GC L P + D D NGR +LSLEQLGLL APT++L QT +V+GE E++ +E+ PLW TLPAV +D++ V DR+GYPG AG+IR + +L A+ Sbjct: 146 NQVGAEQLAGVGAEVHVLPDGSTTREQAILLGEFFGRQAQAEELVAELDAEYAASQGEVPDGCEVSVAAIYAGANVAVFAEPIWTAPSAVTELGCQLVPRGDEVDTDRNGRLYLSLEQLGLLSAPTMILLQTEAVDGEAESVAEIEANPLWQTLPAVQADRVTVLDRIGYPGIAGEIRLIDDLIVAV 332
BLAST of mRNA_M-pyrifera_M_contig104107.884.1 vs. uniprot
Match: A0A6C7EJB4_ILUCY (Fe/B12 periplasmic-binding domain-containing protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7EJB4_ILUCY) HSP 1 Score: 172 bits (435), Expect = 3.670e-49 Identity = 91/187 (48.66%), Postives = 118/187 (63.10%), Query Frame = 1 Query: 1 DQVGEELLSGIG-EVVVVPDNLDADEQLTVLGELFEREAEAAALISELEAAQLSADEAISDECVVSLATIYGGPSVAAYVEPAWPLPTAIVDAGCTLDPDTSDADPDSNGRAWLSLEQLGLLDAPTLVLFQTSSVEGEDEAIEVVESQPLWPTLPAVASDQIIVFDRLGYPGAAGQIRFLGELEAAL 558 D+VG E L+G+G E+ V+P EQL +LGE F+R A+ +I+EL+AA A ++D+C S+ IY GP+VAA+ P W +P AI + GC L P PD NGR WLSLEQLGLLD P L++ QT +VEGE AI+ V PLW LPAV S + DRLGY G G+IR L ++ A L Sbjct: 172 DEVGAEQLAGVGSELHVIPSGSSGREQLELLGEWFDRTDRASEMIAELDAAYDDARSRVADDCAASVVAIYAGPNVAAFAGPVWDVPRAIDELGCELVPSADGLSPDGNGRVWLSLEQLGLLDGPELIMLQTDTVEGEQAAIDDVTGSPLWSQLPAVQSGDVTTLDRLGYAGIDGEIRLLDDIVAIL 358
BLAST of mRNA_M-pyrifera_M_contig104107.884.1 vs. uniprot
Match: UPI00130E8869 (ABC transporter substrate-binding protein n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00130E8869) HSP 1 Score: 164 bits (416), Expect = 2.440e-46 Identity = 86/185 (46.49%), Postives = 117/185 (63.24%), Query Frame = 1 Query: 1 DQVGEELLSGIG-EVVVVPDNLDADEQLTVLGELFEREAEAAALISELEAAQLSADEAISDECVVSLATIYGGPSVAAYVEPAWPLPTAIVDAGCTLDPDTSDADPDSNGRAWLSLEQLGLLDAPTLVLFQTSSVEGEDEAIEVVESQPLWPTLPAVASDQIIVFDRLGYPGAAGQIRFLGELEA 552 DQVG E L G+G EV+V+PD + E++ + GE F REAEA LI++L+AA E + ++C S+ IY GPS A + P W +P A+ GC L P + + D NGRA+LSLEQL ++ P L+L Q +V G+ EA+E +E P+W LPAVAS + V DRLGYPG G+ R + EL A Sbjct: 170 DQVGREQLDGLGAEVLVIPDGTTSRERVELFGEHFGREAEAEGLIADLDAAYAVGSEQVPEDCAASVVAIYPGPSPAVFARPVWAVPLAVDTLGCELVPSGDEIETDGNGRAYLSLEQLEVIAGPELILLQNDTVTGDTEAVEEIEQNPIWGQLPAVASGDVTVIDRLGYPGLVGETRVVDELVA 354
BLAST of mRNA_M-pyrifera_M_contig104107.884.1 vs. uniprot
Match: A0A2E4W1K6_9ACTN (Fe/B12 periplasmic-binding domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2E4W1K6_9ACTN) HSP 1 Score: 119 bits (298), Expect = 4.480e-29 Identity = 68/184 (36.96%), Postives = 110/184 (59.78%), Query Frame = 1 Query: 7 VGEELLSGIGEVVVVPDNLDADEQLTVLGELFEREAEAAALISELEAAQLSADEAISDECVVSLATIYGGPSVAAYVEPAWPLPTAIVDAGCTLDPDTSDADPDSNGRAWLSLEQLGLLDAPTLVLFQTSSVEGEDEAIEVVESQPLWPTLPAVASDQIIVFDRLGYPGAAGQIRFLGELEAAL 558 V ++LL GI V+ E++ LGE+ ++A AL+++ + A +A +S + VSLATIY G ++A +V+ +P I+D G L P + NGRA++S+E++G L +P ++L Q+++VEGEDE++ V+ LW LPAV S ++ DRLGYPG G+IR + +L + Sbjct: 155 VDQDLLDGIAPTSVISGE-GWRERVMSLGEILNAPSQADALLADYDLAISNAKAELSGDISVSLATIYPGSNIAVWVDGPSNIPQTILDMGIELSPGINSYSSAMNGRAYISIEKIGDLSSPIIILSQSTAVEGEDESLRNVQDNSLWKNLPAVTSGKVSTIDRLGYPGVEGRIRLINDLVGTI 337
BLAST of mRNA_M-pyrifera_M_contig104107.884.1 vs. uniprot
Match: A0A2D6UWJ2_9ACTN (Fe/B12 periplasmic-binding domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6UWJ2_9ACTN) HSP 1 Score: 110 bits (274), Expect = 2.050e-25 Identity = 63/186 (33.87%), Postives = 107/186 (57.53%), Query Frame = 1 Query: 1 DQVGEELLSGIGEVVVVPDNLDADEQLTVLGELFEREAEAAALISELEAAQLSADEAISDECVVSLATIYGGPSVAAYVEPAWPLPTAIVDAGCTLDPDTSDADPDSNGRAWLSLEQLGLLDAPTLVLFQTSSVEGEDEAIEVVESQPLWPTLPAVASDQIIVFDRLGYPGAAGQIRFLGELEAAL 558 D V ++L GI VV + D +Q+ LGE+ A +++E + + ++ + VS+ TIY G ++A +V+ +P ++D G L P+ + GRA+LSLEQ+ L++P ++L Q++ V GE+E++ +E+ PLW LPAV + +IVF+RLGYPG G++ F+ + L Sbjct: 178 DIVSLDILEGITTTKVVTSS-DWRQQVIELGEILGTNDTADEILNEYDTLISETKQLLASDLTVSVVTIYPGNTIAVWVDGPSNIPQTLIDLGVKLSPNKNTYQNARYGRAYLSLEQISELNSPFILLSQSNEVSGENESLSEIENNPLWQNLPAVKNGDVIVFNRLGYPGVEGRMEFIKDFREGL 362
BLAST of mRNA_M-pyrifera_M_contig104107.884.1 vs. uniprot
Match: A0A178LSY8_9CHLR (ABC transporter substrate-binding protein n=1 Tax=Chloroflexus islandicus TaxID=1707952 RepID=A0A178LSY8_9CHLR) HSP 1 Score: 105 bits (261), Expect = 7.560e-24 Identity = 67/189 (35.45%), Postives = 106/189 (56.08%), Query Frame = 1 Query: 1 DQVGEELLSGIGEVVVVPDNLDADEQLTVLGELFEREAEAAALISELEA-AQLSADEAISDECVVSLATIYGGPSVAAYVEPAWPLPTAIVDAGCTLDPDTSDADPDS--NGRAWLSLEQLGLLDAPTLVLFQTSSVEGEDEAIEVVESQPLWPTLPAVASDQIIVFDRLGYPGAAGQIRFLGELEAAL 558 +Q+G E LS I + + + + L +F R EA ++ A Q+ A+ + VS+ TIY GP+VA + + P+P + + G PD + + + NGRA++SLEQL L T++L QTS VEGE +A+ +++ PLW LPAV + ++++ DR+GYPG GQ L +L+ AL Sbjct: 128 EQIGYERLSKIAPTIALSGATPLENYVETLA-VFGRGEEAQRTVANFRAEVQVMANRLNAAGQSVSMMTIYPGPNVALWFDGPSPIPLLVRELGIQFRPDPATVNGLNIRNGRAFISLEQLTLASGETILLLQTSGVEGEAQAVVELQANPLWQQLPAVQAQRVVILDRIGYPGLRGQRALLADLQQAL 315
BLAST of mRNA_M-pyrifera_M_contig104107.884.1 vs. uniprot
Match: A0A2E3WQY7_9ACTN (Fe/B12 periplasmic-binding domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E3WQY7_9ACTN) HSP 1 Score: 105 bits (262), Expect = 9.510e-24 Identity = 65/181 (35.91%), Postives = 106/181 (58.56%), Query Frame = 1 Query: 16 ELLSGIGEVVVVPDNLDADEQLTVLGELFEREAEAAALISELEAAQLSADEAISDECVVSLATIYGGPSVAAYVEPAWPLPTAIVDAGCTLDPDTSDADPDSNGRAWLSLEQLGLLDAPTLVLFQTSSVEGEDEAIEVVESQPLWPTLPAVASDQIIVFDRLGYPGAAGQIRFLGELEAAL 558 +LL+ I V+ + D +Q+ LG++ + A L++E ++ + I++ VSLATIY G ++AA+V +P ++D G TL P+ + GR +LS+EQL +P +VL Q+++VEGED+++ +E LW LPAV S +++ DRLGYPG G+IR + + A L Sbjct: 172 DLLTEIASTEVLTSD-DWRQQVIELGQVLDTPQRAEDLLTEYDSVIAESKIDITEGMEVSLATIYSGITIAAWVSGPSNIPQTLLDLGVTLYPNETTYPNVRYGRTYLSIEQLSDFSSPIIVLSQSTAVEGEDQSLIDIEKNLLWKNLPAVKSGKVLTIDRLGYPGVEGRIRLIKDFLAGL 351
BLAST of mRNA_M-pyrifera_M_contig104107.884.1 vs. uniprot
Match: UPI0019F7CF49 (ABC transporter substrate-binding protein n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019F7CF49) HSP 1 Score: 101 bits (252), Expect = 1.780e-22 Identity = 63/164 (38.41%), Postives = 94/164 (57.32%), Query Frame = 1 Query: 73 EQLTVLGELFEREAEAAALISELEAAQLSADEAISDECVVSLATIYGGPSVAAYVEPAWPLPTAIVDAGCTLDPD--TSDADPDSNGRAWLSLEQLGLLDAPTLVLFQTSSVEGEDEAIEVVESQPLWPTLPAVASDQIIVFDRLGYPGAAGQIRFLGELEAAL 558 E LTV G+ + A +++EA D A VS+ATIY +VA + + P+P + + G PD T D NGRA++SLEQ+ L+ TL L Q+S VEGE++A++ +++ LW LP+V +DQ+I DR+GYPG GQ + L ++ AL Sbjct: 159 ETLTVFGQSEAAQRTIDAFRAQIEAESERVDAANQQ---VSVATIYSAENVALWFDGPSPIPRLLHELGVQFQPDPATIDGLDIRNGRAFISLEQIPLMSGDTLFLLQSSKVEGENDAVDAIQTTALWQQLPSVQTDQVIRLDRIGYPGLRGQYQLLDDVVQAL 319
BLAST of mRNA_M-pyrifera_M_contig104107.884.1 vs. uniprot
Match: A0A2E9LBL8_9ACTN (Fe/B12 periplasmic-binding domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E9LBL8_9ACTN) HSP 1 Score: 101 bits (251), Expect = 4.080e-22 Identity = 56/181 (30.94%), Postives = 103/181 (56.91%), Query Frame = 1 Query: 16 ELLSGIGEVVVVPDNLDADEQLTVLGELFEREAEAAALISELEAAQLSADEAISDECVVSLATIYGGPSVAAYVEPAWPLPTAIVDAGCTLDPDTSDADPDSNGRAWLSLEQLGLLDAPTLVLFQTSSVEGEDEAIEVVESQPLWPTLPAVASDQIIVFDRLGYPGAAGQIRFLGELEAAL 558 ++L I VV + D +++ LGE+FE A +++E + ++++ + VS+ T+Y G ++A +V+ +P ++D G L P+ GRA+LSLEQ+ L++P ++L Q++ V GE ++++ +E LW LPAV S +++ +RLGYPG G++R + + L Sbjct: 183 DMLEEIATTKVVT-STDWRQRVIELGEIFETSNIADEILNEYDTLISETKQSLASDLTVSVVTVYPGNTIAVWVDGPSNIPQTLIDLGVELFPNKDTYQNVRYGRAYLSLEQISDLNSPLIILSQSNEVSGESDSLDEIEKNSLWQNLPAVKSGNVMIINRLGYPGVEGRMRLIKDFREGL 362 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104107.884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig104107.884.1 >prot_M-pyrifera_M_contig104107.884.1 ID=prot_M-pyrifera_M_contig104107.884.1|Name=mRNA_M-pyrifera_M_contig104107.884.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=188bp DQVGEELLSGIGEVVVVPDNLDADEQLTVLGELFEREAEAAALISELEAAback to top mRNA from alignment at M-pyrifera_M_contig104107:3..566+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig104107.884.1 ID=mRNA_M-pyrifera_M_contig104107.884.1|Name=mRNA_M-pyrifera_M_contig104107.884.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig104107:3..566+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig104107:3..566+ >mRNA_M-pyrifera_M_contig104107.884.1 ID=mRNA_M-pyrifera_M_contig104107.884.1|Name=mRNA_M-pyrifera_M_contig104107.884.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1128bp|location=Sequence derived from alignment at M-pyrifera_M_contig104107:3..566+ (Macrocystis pyrifera P11B4 male)back to top |