mRNA_M-pyrifera_M_contig104.853.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104.853.1
Unique NamemRNA_M-pyrifera_M_contig104.853.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.853.1 vs. uniprot
Match: A0A8D1A7H5_PIG (40S ribosomal protein S7 n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1A7H5_PIG)

HSP 1 Score: 363 bits (932), Expect = 1.740e-121
Identity = 189/191 (98.95%), Postives = 190/191 (99.48%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPV 573
            MFTGA KIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFP+
Sbjct:    1 MFTGAIKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPL 191
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.853.1 vs. uniprot
Match: D7G463_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G463_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 4.340e-115
Identity = 188/194 (96.91%), Postives = 192/194 (98.97%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQEP 582
            MFTGATKIVKPEGQEADEFEQ VAQELFNLEMSAADIK++IRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQG RPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCK+DGSK+LKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQEP
Sbjct:  519 MFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKADIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQEP 712
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.853.1 vs. uniprot
Match: A0A7S2XZE0_9STRA (40S ribosomal protein S7 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZE0_9STRA)

HSP 1 Score: 308 bits (788), Expect = 2.310e-99
Identity = 155/192 (80.73%), Postives = 177/192 (92.19%), Query Frame = 1 
Query:    4 FTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            FTGA KIVKP GQE D+FE++VAQEL+NLEMSAA++K+E+RDLYIT AK+V+VGGGKKAIII VPY  LR++HKIQ RLVRELEKKFSGRHVV+IA RTILGKSY RSTKT+G RPRSRTLT VQ+ +LEDLV+PTEIVGKRT+CK+DGSKILKV LDPKDQVNVETKLDTFS VYKK+TNKDVVF+FP+QE
Sbjct:   25 FTGAKKIVKPAGQEIDDFEKSVAQELYNLEMSAAELKAELRDLYITAAKEVEVGGGKKAIIIVVPYVKLRAFHKIQLRLVRELEKKFSGRHVVVIAQRTILGKSYTRSTKTKGPRPRSRTLTHVQEQILEDLVYPTEIVGKRTKCKLDGSKILKVLLDPKDQVNVETKLDTFSFVYKKLTNKDVVFQFPIQE 216
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.853.1 vs. uniprot
Match: A0A836C8B1_9STRA (40S ribosomal protein S7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B1_9STRA)

HSP 1 Score: 306 bits (784), Expect = 3.760e-99
Identity = 153/186 (82.26%), Postives = 177/186 (95.16%), Query Frame = 1 
Query:   22 IVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            IVKPEGQ ADEFEQTVAQEL+NL+MSAA+IK++++DLYIT AKQV++ GGKKAII+FVPYRLLR++HKIQ RLV ELEKKFSGRHVVIIA RTILGK++AR++KT+G RPRSRTLTAVQDA+LEDLV+PTEIVGKRTRC+VDG+K+LKV LDPKDQVNVETKLDTFS VYKK+TNK+VVFEFPVQE
Sbjct:    6 IVKPEGQAADEFEQTVAQELYNLQMSAAEIKADLKDLYITSAKQVELAGGKKAIILFVPYRLLRAFHKIQARLVPELEKKFSGRHVVIIAQRTILGKNFARNSKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCRVDGTKLLKVHLDPKDQVNVETKLDTFSYVYKKLTNKEVVFEFPVQE 191
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.853.1 vs. uniprot
Match: A0A6T5NXM7_HETAK (40S ribosomal protein S7 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NXM7_HETAK)

HSP 1 Score: 300 bits (767), Expect = 3.570e-96
Identity = 153/193 (79.27%), Postives = 172/193 (89.12%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            M  G+ KIVKP GQE DEFE  VAQELFNLEMSA +IK+++RDLYIT AK+VDVG GKKAII+ VPY+LLR +++IQ RLVRELEKKFSGRHVVIIA RTILGKSYARSTKT+G RPRSRTLTAVQD++LEDLV+PTEIVGKRTRC V G K+LKV LDPKDQVNVETKLDTF+ VYKK+TNKDV F+FPVQE
Sbjct:   26 MSLGSKKIVKPPGQEPDEFEAQVAQELFNLEMSAVEIKADLRDLYITAAKEVDVGPGKKAIIVVVPYKLLRKFNRIQIRLVRELEKKFSGRHVVIIAQRTILGKSYARSTKTKGLRPRSRTLTAVQDSILEDLVYPTEIVGKRTRCAVSGEKLLKVYLDPKDQVNVETKLDTFAYVYKKLTNKDVSFQFPVQE 218
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.853.1 vs. uniprot
Match: A0A2D4C6D5_PYTIN (40S ribosomal protein S7 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6D5_PYTIN)

HSP 1 Score: 293 bits (750), Expect = 5.440e-94
Identity = 146/193 (75.65%), Postives = 171/193 (88.60%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            MFTGA KI KPEGQ ADEFEQ VAQELFNLE SAA++K+E++DLYIT AKQVDV  G+KAI+IFVPYRL ++++KIQ RL RELEKKFSGRHVV I  RTILGK +AR+ K  G RPRSRTLTAVQ+A+L+D+V+PTEIVGKRTR ++DGSK+LKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPV +
Sbjct:    1 MFTGAAKIKKPEGQTADEFEQQVAQELFNLEASAAELKNELKDLYITAAKQVDVASGRKAIVIFVPYRLHKAFNKIQARLTRELEKKFSGRHVVFITQRTILGKGFARANKATGPRPRSRTLTAVQEAILDDIVYPTEIVGKRTRVRLDGSKLLKVYLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVHQ 193
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.853.1 vs. uniprot
Match: A0A662XBL9_9STRA (40S ribosomal protein S7 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XBL9_9STRA)

HSP 1 Score: 293 bits (750), Expect = 5.440e-94
Identity = 146/193 (75.65%), Postives = 173/193 (89.64%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            MFTG +KIVKPEGQ  DEFEQ VAQEL+NLE+SAA+IK++++DLYIT AKQVD+  G+KAI+IFVP+RL  S+ KIQ RLVRELEKKFSGRHV+IIA RTILGK +AR+ KT G RPRSRTLTAVQ+A+L+DLV+PTEIVGKRTR ++D SK+LKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPV +
Sbjct:    1 MFTGRSKIVKPEGQTPDEFEQQVAQELYNLELSAAEIKNDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVIIIAQRTILGKGFARANKTSGPRPRSRTLTAVQEAILDDLVYPTEIVGKRTRVRLDSSKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVHQ 193
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.853.1 vs. uniprot
Match: A0A7S2C777_9STRA (40S ribosomal protein S7 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C777_9STRA)

HSP 1 Score: 289 bits (739), Expect = 2.810e-92
Identity = 149/196 (76.02%), Postives = 172/196 (87.76%), Query Frame = 1 
Query:    1 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVG---GGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            MFTG  KIVKPEGQE+ EFE TVAQELFNLEMSAA+IKSE+RDLYIT AK+V+VG    GK+AIIIFVP++LL+ +HKIQ RLVRELEKKFSG+HV I+A RTILGKSY+RSTKT+G RPRSRTLTAVQDA+LEDLVFPTEIVGKRTRCK+DG+K L V LD KD VNVETKL+TF+ VYK +TNK+V F FP ++
Sbjct:    1 MFTGFKKIVKPEGQESTEFENTVAQELFNLEMSAAEIKSELRDLYITAAKEVNVGPASAGKQAIIIFVPFKLLKQFHKIQARLVRELEKKFSGKHVTIVAQRTILGKSYSRSTKTKGPRPRSRTLTAVQDAILEDLVFPTEIVGKRTRCKLDGTKQLNVFLDAKDIVNVETKLETFADVYKHLTNKEVEFAFPTEQ 196
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.853.1 vs. uniprot
Match: H3G9W8_PHYRM (40S ribosomal protein S7 n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3G9W8_PHYRM)

HSP 1 Score: 288 bits (737), Expect = 4.260e-92
Identity = 146/189 (77.25%), Postives = 168/189 (88.89%), Query Frame = 1 
Query:   13 ATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            A+KIVKPEGQ ADEFE  VAQELFNLE SAA+IK++++DLYIT AKQVD+  G+KAI+IFVP+RL  S+ KIQ RLVRELEKKFSGRHVVIIA RTILGK Y+R+    G RPRSRTLT VQ+ +L+DLVFPTEIVGKRTRC++DGSK+LKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPVQE
Sbjct:    2 ASKIVKPEGQTADEFELQVAQELFNLEQSAAEIKTDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRANHGAGPRPRSRTLTHVQEQILDDLVFPTEIVGKRTRCRLDGSKLLKVHLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQE 190
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.853.1 vs. uniprot
Match: K3XAM7_GLOUD (40S ribosomal protein S7 n=3 Tax=Pythiaceae TaxID=4782 RepID=K3XAM7_GLOUD)

HSP 1 Score: 285 bits (728), Expect = 9.930e-91
Identity = 145/189 (76.72%), Postives = 168/189 (88.89%), Query Frame = 1 
Query:   13 ATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQE 579
            + KIVKPEGQ ADEFE  VAQEL NL+ SAA+IK++++DLYIT AKQVDV  G+KAI+IFVPYRL  ++ KIQ RLVRELEKKFSGRHVVIIA RTILGK Y+RS KT G RPRSRTL AVQ+A+L+DLV+PTEIVGKRTR ++DGSK+LKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPVQ+
Sbjct:    2 SAKIVKPEGQTADEFELQVAQELANLQQSAAEIKNDLKDLYITAAKQVDVASGRKAIVIFVPYRLHSAFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRSNKTNGPRPRSRTLVAVQEAILDDLVYPTEIVGKRTRVRLDGSKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQQ 190
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104.853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D1A7H5_PIG1.740e-12198.9540S ribosomal protein S7 n=1 Tax=Sus scrofa TaxID=... [more]
D7G463_ECTSI4.340e-11596.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XZE0_9STRA2.310e-9980.7340S ribosomal protein S7 n=1 Tax=Fibrocapsa japoni... [more]
A0A836C8B1_9STRA3.760e-9982.2640S ribosomal protein S7 n=1 Tax=Tribonema minus T... [more]
A0A6T5NXM7_HETAK3.570e-9679.2740S ribosomal protein S7 n=1 Tax=Heterosigma akash... [more]
A0A2D4C6D5_PYTIN5.440e-9475.6540S ribosomal protein S7 n=1 Tax=Pythium insidiosu... [more]
A0A662XBL9_9STRA5.440e-9475.6540S ribosomal protein S7 n=2 Tax=Nothophytophthora... [more]
A0A7S2C777_9STRA2.810e-9276.0240S ribosomal protein S7 n=1 Tax=Dictyocha speculu... [more]
H3G9W8_PHYRM4.260e-9277.2540S ribosomal protein S7 n=21 Tax=Peronosporaceae ... [more]
K3XAM7_GLOUD9.930e-9176.7240S ribosomal protein S7 n=3 Tax=Pythiaceae TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104contigM-pyrifera_M_contig104:35558..45409 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.5
Seed ortholog evalue4e-99
Seed eggNOG ortholog2880.D7G463
Preferred nameRPS7
KEGG koko:K02993,ko:K11592
KEGG Pathwayko03010,ko05206,map03010,map05206
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0002181,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0003730,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0014020,GO:0015031,GO:0015833,GO:0015935,GO:0016070,GO:0016071,GO:0016072,GO:0016331,GO:0019222,GO:0019439,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0021915,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030097,GO:0030154,GO:0030162,GO:0030234,GO:0030684,GO:0030686,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031647,GO:0031974,GO:0031981,GO:0032040,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035148,GO:0035239,GO:0035295,GO:0042176,GO:0042177,GO:0042254,GO:0042274,GO:0042886,GO:0042981,GO:0043009,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045861,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051438,GO:0051444,GO:0051641,GO:0051649,GO:0051726,GO:0055105,GO:0055106,GO:0060255,GO:0060429,GO:0060562,GO:0060606,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072175,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901796,GO:1901798,GO:1902253,GO:1902255,GO:1902531,GO:1902533,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1904666,GO:1904667,GO:1990904,GO:1990948,GO:2000058,GO:2000059,GO:2001233,GO:2001235,GO:2001242,GO:2001244
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsKOG3320@1,KOG3320@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-02_001435.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03036
Exons6
Model size1574
Cds size585
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815546.0843668-CDS-M-pyrifera_M_contig104:35557..356501622815546.0843668-CDS-M-pyrifera_M_contig104:35557..35650Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 35558..35650 +
1692277457.7275047-CDS-M-pyrifera_M_contig104:35557..356501692277457.7275047-CDS-M-pyrifera_M_contig104:35557..35650Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 35558..35650 +
1622815546.101124-CDS-M-pyrifera_M_contig104:39851..399111622815546.101124-CDS-M-pyrifera_M_contig104:39851..39911Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 39852..39911 +
1692277457.7468455-CDS-M-pyrifera_M_contig104:39851..399111692277457.7468455-CDS-M-pyrifera_M_contig104:39851..39911Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 39852..39911 +
1622815546.1163104-CDS-M-pyrifera_M_contig104:40512..406251622815546.1163104-CDS-M-pyrifera_M_contig104:40512..40625Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 40513..40625 +
1692277457.7550573-CDS-M-pyrifera_M_contig104:40512..406251692277457.7550573-CDS-M-pyrifera_M_contig104:40512..40625Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 40513..40625 +
1622815546.1307602-CDS-M-pyrifera_M_contig104:42117..422441622815546.1307602-CDS-M-pyrifera_M_contig104:42117..42244Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 42118..42244 +
1692277457.764533-CDS-M-pyrifera_M_contig104:42117..422441692277457.764533-CDS-M-pyrifera_M_contig104:42117..42244Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 42118..42244 +
1622815546.143609-CDS-M-pyrifera_M_contig104:43367..434631622815546.143609-CDS-M-pyrifera_M_contig104:43367..43463Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 43368..43463 +
1692277457.7729683-CDS-M-pyrifera_M_contig104:43367..434631692277457.7729683-CDS-M-pyrifera_M_contig104:43367..43463Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 43368..43463 +
1622815546.1593244-CDS-M-pyrifera_M_contig104:44324..444201622815546.1593244-CDS-M-pyrifera_M_contig104:44324..44420Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 44325..44420 +
1692277457.7808716-CDS-M-pyrifera_M_contig104:44324..444201692277457.7808716-CDS-M-pyrifera_M_contig104:44324..44420Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 44325..44420 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815546.177253-UTR-M-pyrifera_M_contig104:44420..454091622815546.177253-UTR-M-pyrifera_M_contig104:44420..45409Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104 44421..45409 +
1692277457.8115766-UTR-M-pyrifera_M_contig104:44420..454091692277457.8115766-UTR-M-pyrifera_M_contig104:44420..45409Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig104 44421..45409 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104.853.1prot_M-pyrifera_M_contig104.853.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104 35558..44420 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104.853.1

>prot_M-pyrifera_M_contig104.853.1 ID=prot_M-pyrifera_M_contig104.853.1|Name=mRNA_M-pyrifera_M_contig104.853.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp
MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAK
QVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRT
ILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDG
SKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQEP*
back to top

mRNA from alignment at M-pyrifera_M_contig104:35558..45409+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104.853.1 ID=mRNA_M-pyrifera_M_contig104.853.1|Name=mRNA_M-pyrifera_M_contig104.853.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9852bp|location=Sequence derived from alignment at M-pyrifera_M_contig104:35558..45409+ (Macrocystis pyrifera P11B4 male)
ATGTTTACGGGAGCAACCAAGATTGTCAAGCCTGAGGGCCAGGAGGCCGA
TGAGTTCGAGCAGACGGTAGCTCAGGAGCTCTTCAACCTCGAGGTGAGTC
CACGGTCTACGGCATTGCAAGTCCATGGTCTACTTCGTTGCGTTGTTTAC
TGCTTGTATCGCGTGCCACGACTTTTGCTGTGCAAGAATACCTCCTTCAG
GTTGCTCTGATGCTCCTCTTTATGTAGCTTGTCGTCGTTACTTGGAAGTG
TCTTGTTAAGTGTCTTGTTATAGCAATAGACCAGCAGTACTCTTTCAAAA
GGAAGTGTCTTGTTTCATACCAGTACCAGTGAAAGTTATTATACAGCAGG
ACCTCGGCAGTGACTCGTCGACTCGAGCTTTGTACTCGTGTACCAGGTAC
CAGCGTATATCCCTGAGAGATGGATGTACAGTAGGTGGAGGATAAGGCTG
CGTTGCTGCATTGCAGTGACTTCCCGTCACCAGGCAGTACTCGTGTTCAT
GGAGAACTGCAACACTAGTACCTGGTACAAAGGTATTAATAGTTGGCGGC
AGCGCGCCACTCAAAACGCAATTCCAGACGATGAGCTATCATAGGAGTCA
TGTCTCCGTGAAGGGAGCATAGCTCTAAAACCCTCGTTCGTTGCCCTAAA
TCTCAAGGGTCAGACACTGCTTGCTATCTGTCCTTATTGTTTGTGCTAGG
GACCGAGGCAGAGGGCCATTTGTGACTCTTGGCCTAGTTAGTACTCACTG
TAGTGAAAGTAACATAGCTGGGTGTTTTGCAGCACGTACTGACTGTAAAC
AAGGGGCAGCACTTACCTGGTGCGCGCACCTACAGCAGTAGGCTACCTGG
TGAAGGTATACGACCAGTATAGTTAGCCGACCCATTTTACACAGGAAACA
TAGTCAGTTTCTGGCACGTTACGGTTTTATCGGTGTTACCCGCGGAGTGC
TCGTGTCCAACGAGTTCCTGCCGATGTTGCAAATGAGTACCCGGGCACTC
GCGGGTATTTGTCACTCACGGGTATTTGGGCCCGAGGTACCCAATATTTT
ACCCGGGAAACCGGGGGTGGAAGTTTATCATCCCCAACAATCATCTGTGC
TGGACGGTGTTTCGTACTACAGCAGTATACTTTTGCGACACGTTTGAACT
GGGGATAGCGTGCACGGGGCTTTGAGAACACTCGCTTTCGCCTTCCGTCG
AGATATCATAAACCCTTGGCTTCCACGAATGCTCCACGCTGCTGGTAGAC
CGGCTAGACTGCTATTGCGTACCTCGCAGCTCGGGGGGTATCAGGGTGGT
GTGTATGTATATGAGAGCGATGTTATTTTTTGTGAGGGTTTCTCATAGAT
ATTGCACCAAATACTGCCCAGGGGAGGTGTTTTGGGGGGTGATACATCAA
TAGCACCGTTCCCGAGGCTTCCAGGGTGAAATGCCACTCGTAGATACCCG
TGACGGATATTGACAGGCCGGGTAGTACTCGCGAGTACCGGTGTAGTTGA
CAATTCGGCACATCCCTTTTATCTACTATTAATAGTATGCTCTATGCTCT
ATGCTCTATTAATAGCTTACTTCCCGAGTATTAATATTGCGCAGTTTTTT
CACCCGGGATAGGCCGCTGGATAGCCGCACCCGCCTGAGGGCTCAATCAA
ACCTGCCTACAATATACAACGGCGCTTGCTTCTGTCGCCGTCTTACGGCC
CTATTCCTCTGCTTGTACAGTAGATGGTATCACGGATTAAACGTGTCGCA
AAAACCGATGGACTGGGAGTGTCACCGTAGTCGTTTTGCATGCTACCTTT
GATGCACCATACCGCTTGCACTACCGTATACCTGGTAGGCTATTCCTCAA
CAGTTAGTTCGAGGGTTTAGCAGTCGCGATACTTGAGAACTCTCAAACCT
TCACCGTCAACATATACCATGACCCGGTACGTCTCATACCTGCATCATAC
AAGGACTTGACTTGGTATGGTTTGCACGAGACCAAAGCTTACGGAAAGGG
TGGAAGTCTCATATGTATACAAACAACAAACACGCTAAAGAGAGCATCCC
CCCTTGGACAAACTTTGTAAGCTCATGTTCTCGACGGCGGAGAGAGGGCG
AACGCCTATTATAGCGGTGCGTCTACAGTATGGAAAGACCTTCCCAAACC
TCTTCCCGTATATGTTTTCGGAAAAATCGCTTCGGAAAATCATCCAATAT
AGGGTGTGTTGTAATGTTTTCACGTGTTGTAGTGTAGGCCTTGATATCAT
CATACGGGACTAGTAATAGAGCAACAGAGCAGTAAACGACATACCGGTAC
GACAGCGTTCTGCTACGACAGCAGTTTTGATAATCGTTATTTAGTAACCC
TCGGTCGCTTTCCATCGATCAATTCTTACTTGAACACGAAACCCCGCCAG
ACCTGCCAAAGCGTGTTTCCCATTCACTCGGCTGTGAGTCTGAGGCCGGT
TGTTTTCATAAGCAGGGCTGTTCACGAATCGCCTCATACCTCTCGGGTCG
GGTAACGGTTACCGGACCCGAACCGTGAGAGTTTGAGGACCTCCTGACCC
GACCCGACCCGACCCAACCCGTGAGATTTCGAAAACTTGCTGACCCTTCC
CTTGTTTATTTTTGGGGTCATCACCCGTGAACAGCCCTGGTTATTTGTTG
GGTGGCGAAACGAGTACGAGCGGAGTGCTACGAGTATTTTGGCGGCGAGA
TCTTACCCCAACAGGCACTCCAGCGGTACGACCTTGAGCGAGCACACTTT
CAAACGTTATATTTTCAAAACCGAGCACACTCCAAACGTTATAATTATGA
TGGTATAAGCTCATGTCGACTTGTATTTTACCTGGTATATGTACGCGTAC
AGCAGTAGAGCACCTTTTCATCACAAGCCATTTTACTACTGTACTATAAT
ATCGACCCGAAACTCGGTTGCACATGCGAAGGGTTTCGAGGTTGGAGGGA
TGTTTCTCACGTCAGATTGTTGAGTATTCCCCTGCGCATTAAACGTTCAA
TGATTATCGATACTCCGACTGGGAGTGTTGCACACTGCACACTAGGGGTG
AGACAGCTGCATTTTGTGTGGTGAATCATTAGCGTTTGTTCTTGATGGCG
ACTGGATGGCTTGTCCAACGACGCGAAAAAAAGGAGGTGACCGGATGTTG
TTCCAACGCTTTGAAGCTTTGTGTTGTATCACACCCTATCTCGTCCAAAG
AAACACAGAAACCTCGTGCTGCCTTTGGGCAACCTAGCGTTTGTCATCGC
ATCGATTCGCCAAGTGGTGTCGGCAAACGGCATGCCCGAGCCGAGCCGCG
CCCCGACATGAACCACCGCCTCCTCCGTCAACATTTCATTTCATGCGAAG
TGTACCAATATCAAGCGAGCCCTCCTCGCCCTTGTCTCGTATCAAACCCA
GAGGCTGCCATCAAACTCCTTCACCTGGGCCCGGTAGAGGAGTTTTATAG
CAGCCTCTGGTTTTGATAGAAGAGGAAGGGCATTTCCCTTGATAGTAGTG
GTACATTTGGCGTGGAACCAAATCTTGACTGAGGAGGCGGCGGTTGATAT
CATGGCATGACTCGTCTCGGGCATGCCGTTTGCAGTATCCCTGACTCCAT
CAGGCGTCATCTGTTTCATACTCTAGTATCTTGGCAGTATATGCTGGTAG
CGCAAGACAAGTGACCTATTTGTGGTGAGATAATACGGTGTAGCTGTCTT
CCTTGGTACGCCGCCGTCGTCTCTGTGTGGGCAACTGCAGAACTTGATAG
CAGGTACACAGCAAGAGTGCAGACCCCCTCTAGGACACCAGATGCAGTGT
TGACAGCCGCTAGTGGTCTTGGTCGCGTCCAAGTTTGTTTCTTTGGTGTT
GCCTGACAGTCATGTTTTTGTGCCTGCAGTATCCACGTCCTGTGTTTGGT
GCAAACAGATAAATTCTACGATTATATCAGGTATCGAATTTTGCTTTTTT
GCTATCGGTGTCAGCGTGCGATCCTCTGATCGACGCCCCTCGCCGATTGC
CTGTCGGCACACCCGAATAATGGATATACGGCACCGTTTTCAGGTGCCCC
GAAGCCGCCCCCATGATAGATACCTGATACCTGATACCTGATACCGTCAT
AGCATCATAGCCACCTAACCTACCAGGTAGCACGTTGGCATTAAGACTCG
CTATAGCCCTACTCGATGAATTAAGGCATGAAAGCACCGAAGCCCGTCCC
AAAAATGTGCCGAACTCACCAAGACGCCGTCCCTCTTGCCCCTGCGTTGC
CGTCGAATTGTCTCTGCTCTCATCTGACTGACGTGCTCTGGTAGATGTCC
GCGGCGGACATCAAGTCGGAGATCCGCGACCTCTACATCACGGGGGCAAA
GCAGGTGGCCACGCTATTGCACGCTATTCGTGCCACGCGCGGGGAGGAGG
GAGTGCATCCGTGCCCCACTCGGTCGTGTGTGTGATGTGTTTGTGCAACG
CGCGCACAGTTTCGCCGCTAAGAGCAGCCGTTTTCACGGTAGCAGTATTA
GTATTAGTAGCTGCTTGTGCTGCCAGTGCTGCCAGTGACAGTGGTATTGC
AGTAGTATGAGTAGTTGCTTGTGCTGGCCACATAACTAGACAGGTGCCGT
CATTCTTCACCGCTTAGAGTACACGCCATGACGGCACTAGAGTATTAGTA
GTTGCACGTGCTGAACCCAAATGGTTGGTTTTTGTTGCTCGTTCATGATT
ACCACGCGGCAGTATCGGTTTGCCTGTGTGCCCCGTGCGTCGTCATGCCA
TCGCTTGTGGCACGTTCGAGGCACCTGGTCTTGAGTCGGAGTCGTGGTTT
GCCCCCAACTCCCGTGTGAAGGAGCTATTCTGTCTTGTCCTTGCCTACCT
TGGAAATGCTTCAACTGTTCTCTTCATTCGTGTATTGTATCTGGTATTCT
GAAGTGTGATGTGTGATAGACTAATTTGTGTCCTGTGTATTTTTTTGTGG
GTTAGGTGGATGTCGGGGGCGGCAAGAAGGCCATCATCATCTTCGTACCG
TACCGTCTTTTGAGGTCTTACCACAAGATCCAGACGCGCTTGGTGCGAGA
GCTGGAGAAGAAGTTCAGGTCAGCACCATGGCGTAGGCGTAGGGTCAAGC
AGTTTCCATGCTTGTTAAGTTGCCATGCCCGTCGTGCTAAGCAGGTTCTA
TTTTTTTTATTGCCATACCGTCGTGTCGCAGGTTCTTACGTTCTTACGAT
TCGTGACATTATTTGGCAGTCGCCAGGGCAAGAGTGACATGGATAGATGT
CGATTCTGGCACGGGCTGGTATGCGTATTACACGAAGCTGCCCAGACAGA
CGGCTGGGGGGGGTGATACACGTGAAAGTTGCGCAATGTCCGGAGCTATC
ACGTCACTCGCGCTTCATGACAATTACTCGAACGACTTCGTGGGCACAGT
ATTAATAGTATATATGTATGTACGTATGTATGTATGTAGAGGTAAACTCC
TCACGATGTGTTTTGCTTCTGGTCCGGCTTGTTTGACTCCCTAAGGGGGG
TGTTGTTTGTCCAGGAAGACCGTCAGCACCAGGATCTTGTATTAATATAA
AGAGCTTGCAACAGAAGGATCAGCAGCGGCAGGCTGCGCGCGTGTCGTGT
TTTAATTTTTGTTTTATTTTTGATGCAATTCGAATACAGTACGTTTATCA
GAGACATGCCCTGGCTACCCCAGTGTATATACTACAAGCAGTGTACCTGG
CATGTGTAGGTTGGGTAGTTTCGCGTGGCCGATGGTTCAATGATGACTTT
TTTGTGGACAAGTTTTCCTCTGCATACTGCATATTGCATACTGCATACGT
GGTATATACCCCTGTGTTGCGTATAGCACGCGTGGTATATGCAGCTCAGT
AGGCAAGCGATAACACCCCCCCCCCCCCCGGATGAATAGCGAAGCCCACC
TTCTGTCCACAATAGGGGGAAGTGCAAAGGCCGAGCGATGCATGCGGGCG
TCTGTGAAATATCTCTCTGTCATCGAGATATTCCCAAAGCCACATTTTTC
GCTGTTTATGCCCTCCTTAATTAACCCTTTTACAGCAGTAGGACTGGCAG
TAGGTAGTGCCAGTAGTGTTATTAATAGTATTCTACTGCAGTCCCGTTTT
GGGGACCAACCACTCTAATTCTAAGTAGTTTGTCTCCGCAAGTAGAGACT
GTTTAGAATCAGACTACTTTGTTTCCAAACTGGACTGCGTAGAATTAGAG
TTTGTCTCCCAAACAGGACTGCAGTATACTACAGTACTAACTTTACTACT
GTAACACTACTAACAGTCCTAGTCCTACTGTGGAACGGTTAGGCATGGTA
TGGAGAAACTCGGCTCGGAAATTTGTCTCAGCAGGGGATTTGTTTTCTTG
CGTCTTTTATGTATGTACGGTAGTCGCTTCATGTATTCAAGGCTGTGAAG
TCCCGACGGGGTTATAGGGAAGGGCGGCGGGCGCGTTTACGTTAACAATG
CCGTCCATCCGCACCTCTGTTTTTAGTATTTACCGACTTGACTAACCAAA
GCCGGCCGCAACTCCGACTCTTGGCGTGTCTCGGTTGTCTCGCTTCGAAC
TAACGTCCAGCGGCCGCCACGTGGTGATCATCGCGACCCGCACCATCCTC
GGCAAGAGCTACGCTCGCTCCACCAAGACCCAGGGAACCCGCCCACGCTC
ACGTACCCTGACGGCCGTACAGGACGCCATGCTCGAGGTACGGTATACGG
TATACATCACATATAAATAGTGTTCCACGCGAGGTTGTGCTGGATTTTTG
TTTGTTTGTTTGTATTCCTTGATGGTAATAGTATTGATTCATTTTTCTTG
TAAGTACATACACGTATATATGAGTAGTATTTGTAGTTGAATGATTTTGA
CAAGAGTATGGATGAACTGCAATGCTGCATGGTTTTGGTCGCAGTCCGTA
GTTGTCTGCCATCGGCTGTTTTGTGCTTGTGGCCCCTGTGAAAATACATA
CAAGTCAGCTATCACACACCTGATGTGATAGCGCACCCCCTTGGAGTGTT
TTCGTGTTTTCCTCGATGTTCTCGACACCGGGGAGAGTGCAGACATGAAA
GCGATGTGTCTATGGAATAAATCCCGACGAGATCTCCCCAACGCAGCTCT
TTTCGTTGTGTGTGCCCCCCTAGTTTACAGTAGGAGAAATTGTTTCGAAA
ATTCGTTCAAGGCTGTGTGTTATCTTATCACCCGGGTGATAGTCGTATAC
CGCACCGTCAGTAGGAAAGGGAGGGTCAAGAAACATTGGGGGTGCACTGC
CAGTTTGCATTGTCAGCATACCTCATTTCGGAGAATACTCGTCGAGATTG
TGAGCCTGAGATGAACCACCGCGCGCCTCTCGATTACTAAAGAGATTATT
TTGGGCTAGCATTTGGTTTGGGAGGATTCCAGTGTGTGGTGGGCTTATTC
CCAGTGCAGTTCGCTACAAGCATGGCATCTTGACAATTGTTTGTGTACTA
CTGTTCCTTCAGTATCCCGTTGGAATTCCGTCGAGCACGCCTACGCCAGG
CTGTACACGTAGTGCGTATATTTGACAGGATGCATGGCCGACCGCTCGCG
TCCAAAATTTCCGGCCGCTTTCACGTCTGATGCCGGGCCACCACGGAACT
CGTCGGTGTCAGAGCCTCATACTACTCGAAAAGGCTGTCCATGGGTCAAT
GGTCTAGTAAAAGTATATTGATAGCTTATTGCGGGGCGTGCGCGGTCTCC
CCGGTAATGCCGCCGACAAACACACGATGGTGTGCCGTATGCTGGTTTGG
AATTGCAGCCATATCTGACTCCACTTCCTTTCTTGTCTGGCTTGTGAAAT
GCTTTTTTAGGATCTCGTGTTCCCCACGGAGATTGTCGGCAAGCGCACAA
GGTGCAAGGTGGACGGCTCCAAGATCCTCAAGGTCCAGCTCGACCCCAAG
GACCAGGTAAGGGACACATACTGCAGCACTGTACGCTAAACTAATATTTG
TAATGATTGTGGTATTGTACGGCAGTAGATGGTATTAGTACTGTAGTAAT
AATAGCAATGAGGGTGTTTGTAGCTATACTGCTGTGATAGCAGATCGTAT
TATGTATGTATAATGTATCAATTGCTCATACTCATCTAGTAGTATTATCA
GTGGTGAAACGGCAGCGATCAACTGTACCGCACGAGTAGTGCTCCACGTG
AACTCGTGTACACAGGCACGGTATATTGATGATACGCCTTTTCGAGAGAC
GTCCACCCCTTCAACGACTGTTTCGACCGCGTGCCTGCATGTTTTGCGTT
TTTGCGTATAGACGCGGACCAACGCAAGTAATGCCACATAGACATCTGGT
ACAGTTTTAGTGCTCCAAGCAGCAAGGGAATCAACTGCTGGCAGACATTG
TGCTACGTACGGCCTTGATGTCGCGTGTTGGTCCCTCAGAGCAGTCGCGC
CGAAGTATTTTACTTTGGCGGCCGATACGTTTGTCGTTCGGTCTTAGTTC
TTTCTTGCGGCAAACATGCACGTCGGCCGCGGCTGTAGTTTGAAAAGTCC
AATCATTTCCCAACTGCAGCCTCGTTCAAAGAACAAACTATTTTATGGTT
GGAAATCGACTTGAGCCTTCTTTTTGGACGAGTCAAAATGTTCAGCTGTA
ACCCCTGTGCAACCTGATTTTTTTTACATGACAAATTCGACGTAACGTGT
TTTGTCCCCTTACATGCAGCAAGTAGTAAAGCGGGTTCAAATCGTTTTCG
TGCGTGTGCATGTTTGTTAACTCACGTCTGGGATGGTTGTGCCGATTTTT
TTGTCGTGGTTATTCAGGTGAACGTGGAGACAAAGCTAGACACCTTCTCC
TCGGTGTACAAGAAGATCACCAACAAGGACGTTGTCTTCGAGTTCCCCGT
GCAGGAGCCGTAGAGTTGACGTCGTTGCTTATGCTCAGCTCAGCCAGGGC
GGTGCGTTAGTGCCGCAAAATCTAAGCTTTTCAGCGTGTCCCACGCCCCA
GCCGTGACTTGAGCCTGAATTGGCGGTCGTGCGGCTGGAGTCGTCTTTCT
TCTGTCTCTGATCTTTGACCGTTCGTTCGCGCATTGAAAATCGGTCCCGA
TGGTGTGCTTGACTGAATCAAGTATTTTGTCCCCGATGGTTATCCGTTCG
CGCATGGATCGGTCGCGATGATGGTGCGAGTGATACCTGACTTCTGAAGG
ACTTGGGGGGGCTTGCGTCTCTGAGCGTTGAACGCTTGCGAGAAGCGATC
CCGGTGGTTTGCGTGCGTGGCTGTGGGTCTTGTGTCTCGGATTGTAGACC
TTCCAAATTGATGGTCTCGATGGTGGTGCGCGTGATGCCCTACAAGAGGC
GATCGTGTGCGTGTCTGCCCCCACGCCTGGTGTCTTTTGACCGTTTTGAC
GTTTTCTGGACCTTACCTCCATTAATCGGTCCGGATGGTGGTGCACGACA
CGACGACGATGTTCCGCCCGCCCGCCAAGCACACGTTAAGCAGTCTGTCT
CTTCGGGACAGTTGCGATCAATCACCCCGGAGGGAGGGCATCGGTTTCAA
ACGAACAGGCGTTACTTTGGAGCAACCATACTATTAGTAACACTAGCCGC
TGACGTCAATAATGTCTACTACGAACTCAAGATTTTTTCAGCCCACCACG
GCCATACATGCCGACGAAAATAGCAACTCACCAGATTCTGATATACCTGA
TACCAGGGTACCTCGTAGCCATGTCAACAGGAGAAAGTCAAAAGGAGATT
ATCCGTTCAACATGTCATCTATGCCACACTCTGTTCCATGTTCTCCATTG
CCTCTGGGTGGCAGTCTAGACACCAAACATCGCAACACCACATTTGGCAT
TTTCTTACTACAACAGCAGTATTGACGGCTTGGCCCCAGCATGGACATCA
TT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig104:35558..45409+

>mRNA_M-pyrifera_M_contig104.853.1 ID=mRNA_M-pyrifera_M_contig104.853.1|Name=mRNA_M-pyrifera_M_contig104.853.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig104:35558..45409+ (Macrocystis pyrifera P11B4 male)
ATGTTTACGGGAGCAACCAAGATTGTCAAGCCTGAGGGCCAGGAGGCCGA
TGAGTTCGAGCAGACGGTAGCTCAGGAGCTCTTCAACCTCGAGATGTTTA
CGGGAGCAACCAAGATTGTCAAGCCTGAGGGCCAGGAGGCCGATGAGTTC
GAGCAGACGGTAGCTCAGGAGCTCTTCAACCTCGAGATGTCCGCGGCGGA
CATCAAGTCGGAGATCCGCGACCTCTACATCACGGGGGCAAAGCAGATGT
CCGCGGCGGACATCAAGTCGGAGATCCGCGACCTCTACATCACGGGGGCA
AAGCAGGTGGATGTCGGGGGCGGCAAGAAGGCCATCATCATCTTCGTACC
GTACCGTCTTTTGAGGTCTTACCACAAGATCCAGACGCGCTTGGTGCGAG
AGCTGGAGAAGAAGTTCAGGTGGATGTCGGGGGCGGCAAGAAGGCCATCA
TCATCTTCGTACCGTACCGTCTTTTGAGGTCTTACCACAAGATCCAGACG
CGCTTGGTGCGAGAGCTGGAGAAGAAGTTCAGCGGCCGCCACGTGGTGAT
CATCGCGACCCGCACCATCCTCGGCAAGAGCTACGCTCGCTCCACCAAGA
CCCAGGGAACCCGCCCACGCTCACGTACCCTGACGGCCGTACAGGACGCC
ATGCTCGAGCGGCCGCCACGTGGTGATCATCGCGACCCGCACCATCCTCG
GCAAGAGCTACGCTCGCTCCACCAAGACCCAGGGAACCCGCCCACGCTCA
CGTACCCTGACGGCCGTACAGGACGCCATGCTCGAGGATCTCGTGTTCCC
CACGGAGATTGTCGGCAAGCGCACAAGGTGCAAGGTGGACGGCTCCAAGA
TCCTCAAGGTCCAGCTCGACCCCAAGGACCAGGATCTCGTGTTCCCCACG
GAGATTGTCGGCAAGCGCACAAGGTGCAAGGTGGACGGCTCCAAGATCCT
CAAGGTCCAGCTCGACCCCAAGGACCAGGTGAACGTGGAGACAAAGCTAG
ACACCTTCTCCTCGGTGTACAAGAAGATCACCAACAAGGACGTTGTCTTC
GAGTTCCCCGTGCAGGAGCCGTAGGTGAACGTGGAGACAAAGCTAGACAC
CTTCTCCTCGGTGTACAAGAAGATCACCAACAAGGACGTTGTCTTCGAGT
TCCCCGTGCAGGAGCCGTAG
back to top