mRNA_M-pyrifera_M_contig104.851.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104.851.1
Unique NamemRNA_M-pyrifera_M_contig104.851.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.851.1 vs. uniprot
Match: D7G461_ECTSI (JMJD6 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G461_ECTSI)

HSP 1 Score: 628 bits (1620), Expect = 3.250e-223
Identity = 348/436 (79.82%), Postives = 382/436 (87.61%), Query Frame = 1 
Query:    1 SRSPPRLVRWERRLRDAKKDHRPRLKNWGRDRFGVEGSRAEKAFEALNWEHGARHDVRGIPRERRNDLTPQDFWEHYEKRRLPVVVSGIPSQEGWRAEERWSLEQLDRRFKDCKLKCGEDDDGYSVKVKVKYFLRYLEQQTDDSPLYVFDSHFDDHEVAKGLLEDFHVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVLSGRKLWVLFPPHVDKSVARGKEMIRQGEDDEPINYFVDLLPRIRRKYGDSIKIYEFVQHPGDTVFVPGGWHHAVLNLDDTIAITQNFCSRHNFEKVWRKTRTGRKKMAAKWLRELEKGYPALAETARRLNAEDGFVMETRG---RRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---EGXXXXXXXXGSSPKRGRKYGSDVTAEDSLTPPSRS 1290
            S SPPRL RWERR+ DAKK HRPRL++WGRDRFGVEG RA  AFE L  E   R  +RGI RERR+DLTP  FW HYEKRRLPVVVSGIPS EGWRAEERW LEQL RR+ DCKLKCGEDDDGYSVKVK+KYFLRY++ QTDDSPLY+FDSHFDDHEVAKGLLEDF VP YFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTV+SGRKLWVLFPPHVDK+VA+GK++IRQGEDDEPINYFVDLLPRIRRK+G+SIKIYEFVQ+PGDTVFVPGGW HAVLNL+D++AITQNFCSR+NFEKVWRKTRTGRKKM+ KWL+EL+K +P+LA+TARRLN+EDGFVM  +G   RRR    XXXXXXXXXXXXXXXXXXXXXXXXX    V   E XXXXXXXX  S KRGRK+ SD + E SLTPP+ +
Sbjct:   17 SSSPPRLERWERRIGDAKKSHRPRLRDWGRDRFGVEGCRAAAAFEELRDE---RDGIRGIARERRDDLTPDQFWRHYEKRRLPVVVSGIPSDEGWRAEERWGLEQLYRRYGDCKLKCGEDDDGYSVKVKLKYFLRYMDHQTDDSPLYIFDSHFDDHEVAKGLLEDFFVPHYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVVSGRKLWVLFPPHVDKNVAKGKDVIRQGEDDEPINYFVDLLPRIRRKHGNSIKIYEFVQYPGDTVFVPGGWWHAVLNLEDSVAITQNFCSRNNFEKVWRKTRTGRKKMSVKWLKELDKEHPSLADTARRLNSEDGFVMVDKGASSRRRSGHHXXXXXXXXXXXXXXXXXXXXXXXXXDSGSVGSGEXXXXXXXXXXXS-KRGRKHMSDASREGSLTPPTHN 448
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.851.1 vs. uniprot
Match: A0A7S3GT28_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT28_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 1.800e-138
Identity = 199/351 (56.70%), Postives = 249/351 (70.94%), Query Frame = 1 
Query:    7 SPPRLVRWERRLRDAKKDHRPRLKNWGRDRFGVEGSRAEKAFEALNWEHGARHDVRGIPRERRNDLTPQDFWEHYEKRRLPVVVSGIPSQEGWRAEERWSLEQLDRRFKDCKLKCGEDDDGYSVKVKVKYFLRYLEQQTDDSPLYVFDSHFDDHEVAKGLLEDFHVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVLSGRKLWVLFPPHVDKSVARGKEMIRQGEDDEPINYFVDLLPRIRRKYGDSIKIYEFVQHPGDTVFVPGGWHHAVLNLDDTIAITQNFCSRHNFEKVWRKTRTGRKKMAAKWLRELEKGYPALAETARRLNAEDGFVM 1059
            S P    WERRL +AK  HRP+LKNW RD F  +  +       L  EH   H +  +     + +    F   YE+  +P V+  IP+QEGW A   W+  +L+ RFKD   KCGEDDDGY VK ++KYFL+Y++   DDSPLYVFD +FD  ++++ LL D+ VPSYF DDLFSLVGE+RRPPYRW L+GP+RSG+SVHIDPL TSAWNT+L GRK WVLFPP   KS+A+G ++I++GEDDE INYFVD+LPRIR K+G ++KIYE +Q PG+T+FVPGGW H VLNL+DTIA+TQNFCS  NF  VWR TR GR KM+ +WL+EL K YP LA  A  LN +D F M
Sbjct:    9 SEPEKKTWERRLDEAKSKHRPKLKNWSRDGFAFQREKDFLKSRELKPEH-QHHKIDVVDC---SSIDKAGFVRIYEENDMPCVIKDIPNQEGWNAATAWTQSKLNSRFKDRYFKCGEDDDGYKVKTRLKYFLKYMKNNKDDSPLYVFDGNFDGDDISRSLLADYKVPSYFTDDLFSLVGEKRRPPYRWILLGPERSGSSVHIDPLATSAWNTILVGRKRWVLFPPETPKSIAKGLDVIQKGEDDEAINYFVDMLPRIREKHGHNLKIYELIQEPGETIFVPGGWWHGVLNLEDTIAVTQNFCSCTNFPSVWRSTRKGRPKMSVRWLKELAKQYPDLAAQALLLNDQDQFAM 355
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.851.1 vs. uniprot
Match: A0A8K1CVA6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVA6_PYTOL)

HSP 1 Score: 412 bits (1059), Expect = 2.520e-138
Identity = 197/340 (57.94%), Postives = 247/340 (72.65%), Query Frame = 1 
Query:   46 DAKKDHRPRLKNWGRDRFGVEGSRA-EKAFEALNWEHGARHDVRGIPRERRNDLTPQDFWEHYEKRRLPVVVSGIPSQEGWRAEERWSLEQLDRRFKDCKLKCGEDDDGYSVKVKVKYFLRYLEQQTDDSPLYVFDSHFDDHEVAKGLLEDFHVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVLSGRKLWVLFPPHVDKSVARGKEMIRQGEDDEPINYFVDLLPRIRRKYG-DSIKIYEFVQHPGDTVFVPGGWHHAVLNLDDTIAITQNFCSRHNFEKVWRKTRTGRKKMAAKWLRELEKGYPALAETARRLNAEDGFVM 1059
            DAK+ HR  +K    DR G  GS   E   +  N           I RE   DLT   F + YEK  +P+++ GIP  EGW A E W+L++L +  K   LKCGEDDDG S+++K KYF +YL+ QTDDSPLY+FDS FDD E  K LL D+ VP YFP+DLFSLVGE RRPPYRWFLVGPKRSGT VH+DPLGTSAWNT+L GRK WVLFPPHV K + +GK  I++GEDDE +NYF+D+LPRI++ +  + ++  E +Q+PGDT+FVPGGW HAV N++DT+A+TQN+CS  NFE+VWRKTRTGRK+MA KW ++L+K +P LA  A +LN EDGFVM
Sbjct:   45 DAKRKHRTDIKPHAWDREGFAGSDVCELPLDETN----------AIKREHARDLTVARFIQEYEKPFVPLIIEGIPETEGWGAVENWTLKKLRKNCKRAMLKCGEDDDGKSIRMKFKYFYKYLKLQTDDSPLYIFDSSFDDREDTKPLLADYAVPRYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTCVHLDPLGTSAWNTLLVGRKRWVLFPPHVSKEIVKGKSHIKKGEDDEAVNYFMDILPRIKKAHSPEELQCIELMQYPGDTIFVPGGWWHAVFNVEDTVAVTQNYCSSQNFERVWRKTRTGRKRMAVKWFQKLQKHHPQLATLAVKLNREDGFVM 374
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.851.1 vs. uniprot
Match: A0A4D9CR63_9STRA (JmjC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR63_9STRA)

HSP 1 Score: 410 bits (1054), Expect = 3.890e-137
Identity = 205/356 (57.58%), Postives = 255/356 (71.63%), Query Frame = 1 
Query:   28 WERRLRDAKKDHRPRLKNWGRDRFGVEGSRAEKAFEALNWEHGARHDVR-------GIPRERRNDLTPQDFWEHYEKRRLPVVVSGIPSQEGWRAEERWSLEQ-LDRRFKDCKLKCGEDDDGYSVKVKVKYFLRYLEQQTDDSPLYVFDSHFDDHEVAKGLLEDFHVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVLSGRKLWVLFPPHVDKSVARGKEMIRQGEDDEPINYFVDLLPRIRRKYG-DSIKIYEFVQHPGDTVFVPGGWHHAVLNLDDTIAITQNFCSRHNFEKVWRKTRTGRKKMAAKWLRELEKGYPALAETARRLNAEDGFVMETR 1068
            W  RL +AK  HRPRLK+W RD F     R+E  FEAL      + D         G+ R    DL+ + F   YE+   PV++ GIP  E W+A E W+ E  L RR +    KCGEDDDG SV+V++K+F +YL +Q DDSPLY+FDS +DD++ AK LL+D+ VPSYFPDD FSLVGERRRPPYRWFLVGP+RSGTS+HIDPLGTSAWNTVL+GRK WVLFPP    S+A+GK + R+GEDDEPINYFVD+LPR+R     + +  +EF+Q  G+TVFVPGGW HAVLNL+D++A+TQNF SR NF  VWRKTR+GRKKMA +WL +L++ YP L   AR+LN  D F M T+
Sbjct:    3 WRSRLEEAKGKHRPRLKDWARDGF-AHHRRSE--FEALAHLPSKQRDNEDQEYRRGGVDRVHCRDLSLETFIREYEQASKPVIIQGIPEAEHWKAAENWTKESALRRRIRKYTFKCGEDDDGRSVRVRLKHFFKYLAKQKDDSPLYIFDSTYDDNKEAKVLLDDYKVPSYFPDDFFSLVGERRRPPYRWFLVGPRRSGTSLHIDPLGTSAWNTVLTGRKRWVLFPPRTSASLAKGKALYRKGEDDEPINYFVDILPRMRSLPATEGLVFHEFIQEAGETVFVPGGWWHAVLNLEDSVAVTQNFASRANFSAVWRKTRSGRKKMAWRWLMKLDESYPELGRLARKLNEMDDFHMLTK 355
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.851.1 vs. uniprot
Match: A0A482T184_9ARCH (JmjC domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T184_9ARCH)

HSP 1 Score: 400 bits (1028), Expect = 1.870e-134
Identity = 187/344 (54.36%), Postives = 245/344 (71.22%), Query Frame = 1 
Query:   28 WERRLRDAKKDHRPRLKNWGRDRFGVEGSRAEKAFEALNWEHGARHDVRGIPRERRNDLTPQDFWEHYEKRRLPVVVSGIPSQEGWRAEERWSLEQLDRRFKDCKLKCGEDDDGYSVKVKVKYFLRYLEQQTDDSPLYVFDSHFDDHEVAKGLLEDFHVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVLSGRKLWVLFPPHVDKSVARGKEMIRQGEDDEPINYFVDLLPRIRRKYGDSIKIYEFVQHPGDTVFVPGGWHHAVLNLDDTIAITQNFCSRHNFEKVWRKTRTGRKKMAAKWLRELEKGYPALAETARRLNAEDGFVM 1059
            WERR  DAKK HRP LKNW RD F    +R +   +  + + G    +  +       ++  +F   YE   +P V+S +P +EGW A + W+L QL   + +   KCGEDDDGY +K+K+KYFL YL   TDDSPLY+FDS+F +   ++ ++ DF +PSYFPDDLFSLVGE++RPPYRWFL+GP+RSG++VHIDPLGTSAWNT++SGRK WVLF P V K + +GKE+I++GEDDE IN+F DLLPRI+  Y D +++ EF+Q  G+TVFVPGGW H VLNL  T+AITQNFCS  NF+ VWR+TR  RKKMA +WL  L + +P LA  A R+N E+GF+M
Sbjct:   15 WERRAEDAKKRHRPSLKNWSRDGFAT--TRKDAFLQLRSLDKGVNSSIVRLDA---YSISANEFRSRYEAHNIPSVISHVPQKEGWLAVQTWTLRQLKEDYGERMFKCGEDDDGYKIKMKLKYFLNYLHNNTDDSPLYIFDSNFYEDSSSRSIMNDFKLPSYFPDDLFSLVGEKKRPPYRWFLIGPERSGSTVHIDPLGTSAWNTLISGRKRWVLFRPGVAKHIVKGKEVIKKGEDDEAINFFTDLLPRIKTTYPD-LEVIEFIQEEGETVFVPGGWWHGVLNLTHTVAITQNFCSYLNFDSVWRETRWSRKKMAVRWLSGLRETHPVLAARADRINMEEGFLM 352
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.851.1 vs. uniprot
Match: A0A024GP98_9STRA (JmjC domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GP98_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 3.610e-134
Identity = 192/347 (55.33%), Postives = 248/347 (71.47%), Query Frame = 1 
Query:   40 LRDAKKDHRPRLKNWGRDRFGVEGSRAEKAFEALNWEHGARHDVRGIPRERRNDLTPQDFWEHYEKRRLPVVVSGIPSQEGWRAEERWSLEQLDRRFKDCKLKCGEDDDGYSVKVKVKYFLRYLEQQTDDSPLYVFDSHFDDHEVAKGLLEDFHVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVLSGRKLWVLFPPHVDKSVARGKEMIRQGEDDEPINYFVDLLPRIRRKYG-DSIKIYEFVQHPGDTVFVPGGWHHAVLNLDDTIAITQNFCSRHNFEKVWRKTRTGRKKMAAKWLRELEKGYPALAETARRLNAEDGFVMETRGRR 1077
            + DAK+ HR  +     DR G     AEK       EH        I RE   DL+   F   YEKR +PVV+ G+P ++ W+A   WSL+ L R++K   LKCGEDD G ++++K+KYFLRYL+ QTDDSPLY+FDS FD+    K LL+++ VP YFP+DLF  VGERRRPPYRWFL+GPKRSGT VH+DPLGTSAWNT++SGRK W+LFP  V K + +GKE IR GEDDE INYF  +LPRI++ YG D ++  EF+Q+PG TVFVPGGW HAVLN++DT+A+TQN+CS  NFE+VWRKTR+GRK+MA KWL++L++  P LA  A + N +D F M ++ +R
Sbjct:   49 VNDAKRRHRTDISFDAWDREGF----AEKDV----CEHAVDESANAIQREHCRDLSVSRFITEYEKRYIPVVIDGVPEEQWWKAVTEWSLKCLRRKYKSAMLKCGEDDKGRTIRMKLKYFLRYLKVQTDDSPLYIFDSSFDERSDTKPLLDEYSVPKYFPEDLFEFVGERRRPPYRWFLIGPKRSGTCVHVDPLGTSAWNTLISGRKRWILFPYQVGKKIVQGKEFIRAGEDDEAINYFSTILPRIKKAYGFDVLQCIEFMQYPGQTVFVPGGWWHAVLNVEDTVAVTQNYCSSQNFERVWRKTRSGRKRMAVKWLQKLQQHRPDLARLAIKCNEQDRFQMYSKHKR 387
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.851.1 vs. uniprot
Match: K3X3W1_GLOUD (JmjC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3W1_GLOUD)

HSP 1 Score: 398 bits (1022), Expect = 1.280e-133
Identity = 182/295 (61.69%), Postives = 230/295 (77.97%), Query Frame = 1 
Query:  178 IPRERRNDLTPQDFWEHYEKRRLPVVVSGIPSQEGWRAEERWSLEQLDRRFKDCKLKCGEDDDGYSVKVKVKYFLRYLEQQTDDSPLYVFDSHFDDHEVAKGLLEDFHVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVLSGRKLWVLFPPHVDKSVARGKEMIRQGEDDEPINYFVDLLPRIRRKYG-DSIKIYEFVQHPGDTVFVPGGWHHAVLNLDDTIAITQNFCSRHNFEKVWRKTRTGRKKMAAKWLRELEKGYPALAETARRLNAEDGFVM 1059
            + RE  +DL+ + F E YEK  LPVV+ GIP  E W A   WSL++L + +K  +LKCGEDDDG S+++K KYF++YLE QTDDSPLY+FDS FD+    K LL+D+ VP YF +DLFSLVGE RRPPYRWFLVGPKRSGT +H+DPLGTSAWNT+L GRK WVLFPP V K V +GK  +R  EDDE +NYF+D+LPRI+R +  + ++  E +Q+PGDT+FVPGGW HAV N++DT+A+TQNFCS  NFE+VWRKTR+GRK+MA KWL +LEK +P LA  A+ LNA+D +VM
Sbjct:   37 VKREHCSDLSVERFIEEYEKPYLPVVIEGIPEAENWGAVHNWSLKKLKKAYKRVQLKCGEDDDGKSIRMKFKYFMKYLEHQTDDSPLYIFDSTFDEKADTKPLLDDYKVPRYFNEDLFSLVGEDRRPPYRWFLVGPKRSGTCIHLDPLGTSAWNTLLVGRKRWVLFPPDVPKHVVKGKHHVRPSEDDEAVNYFMDILPRIKRAHPPEMLRCIELMQYPGDTIFVPGGWWHAVFNVEDTVAVTQNFCSSQNFERVWRKTRSGRKRMAVKWLTKLEKKHPHLAALAKELNAQDNYVM 331
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.851.1 vs. uniprot
Match: A0A0P1AHP6_PLAHL (Histone arginine n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHP6_PLAHL)

HSP 1 Score: 397 bits (1019), Expect = 3.020e-132
Identity = 195/359 (54.32%), Postives = 258/359 (71.87%), Query Frame = 1 
Query:   10 PPRLVRWERRLRDAKKDHRPRL--KNWGRDRFGVEGSRA-EKAFEALNWEHGARHDVRGIPRERRNDLTPQDFWEHYEKRRLPVVVSGIPSQEGWRAEERWSLEQLDRRFKDCKLKCGEDDDGYSVKVKVKYFLRYLEQQTDDSPLYVFDSHFDDHEVAKGLLEDFHVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVLSGRKLWVLFPPHVDKSVARGKEMIRQGEDDEPINYFVDLLPRIRRKYG-DSIKIYEFVQHPGDTVFVPGGWHHAVLNLDDTIAITQNFCSRHNFEKVWRKTRTGRKKMAAKWLRELEKGYPALAETARRLNAEDGFVMETRGR 1074
            PP++   ER + +AKK HR  +   +W R+ F   GS   +   +  N           I RE  ++L+ + F E YE   +PV++ G+P  EGW A +RWSL++L +++K  +LKCGEDD G SV++K KYF  YL  QTDDSPLY+FDS FDDH   K LL+D+ VP YFP+DLFSLVGE RRPPYRWFLVGPKRSGT++H+DPLGTSAWNT++ GRK WVLFPPH+ K +  GK  +R  EDDE +NYF+DLLPR++R    D+++  EF+Q+PG+TVF+PGGW HAVLN+DDT+A+TQNFCS  NF  VWRKTR+GRK+MA KWL++LE   P LA  A++LN +D ++M ++ R
Sbjct:   54 PPKV---ERAIYNAKKKHRSDIDPNDWNREGFA--GSDVCDLPLDESN----------PIKREHCSELSVKRFIEEYELPVIPVIIDGVPEVEGWGAIKRWSLKKLRKKYKRVELKCGEDDYGKSVRIKFKYFFSYLTSQTDDSPLYIFDSSFDDHVDTKPLLDDYQVPKYFPEDLFSLVGEDRRPPYRWFLVGPKRSGTTLHVDPLGTSAWNTLIIGRKRWVLFPPHLPKHLVNGKVHLRGNEDDEAVNYFMDLLPRLKRANSLDALQCIEFMQYPGETVFIPGGWWHAVLNVDDTVAVTQNFCSSQNFAAVWRKTRSGRKRMAVKWLKKLEISNPELAALAKKLNEKDNYIMYSKER 397
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.851.1 vs. uniprot
Match: A0A836CFU6_9STRA (JMJD6 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFU6_9STRA)

HSP 1 Score: 402 bits (1032), Expect = 3.190e-132
Identity = 207/427 (48.48%), Postives = 262/427 (61.36%), Query Frame = 1 
Query:   28 WERRLRDAKKDHRPRLKNWGRDRFGVEG-------SRAEKAFEALNWE-----HGARH------------------------DVRGIPRERRNDLTPQDFWEHY----------------------EKRRLPVVVSGIPSQEGWRA--EERWSLEQLDRRFKDCKLKCGEDDDGYSVKVKVKYFLRYLEQQT---------------------DDSPLYVFDSHFDDHEVAKGLLEDFHVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVLSGRKLWVLFPPHVDKSVARGKEMIRQGEDDEPINYFVDLLPRIRRKYG--DSIKIYEFVQHPGDTVFVPGGWHHAVLNLDDTIAITQNFCSRHNFEKVWRKTRTGRKKMAAKWLRELEKGYPALAETARRLNAEDGFVM 1059
            WERRL  AK +HRP+LKNW  D +G          SR   AF+A         H   H                        + RG+PR     L+ Q+FW+ +                      E   LPV++  +P  E W A  E+ WS E+LDR + + ++KCGEDDDGYS+KV++K+F+ Y++ Q                      DDSPLY+FDSHFD+H+V K LL+++ VPSYFPDDLF LVGERRRPPYRWFLVGPKRSGT  HIDPLGTSAWNTVL GRK WV+FPP + +S+ +GK +IR  EDDE INYF++ LPRIR       +IK+YEF+Q+PG+TVF+PGGW HAV+NLDDT+A+TQNFCSR NF KVW KTR  RKKMA  WL+ L   YP LA+ A ++N +D F+M
Sbjct:   52 WERRLATAKAEHRPKLKNWSCDAYGXXXXXXXXXPSRKAHAFDAFAAARIVDVHACDHAEVWAVQSASQRDGTQSVLCSLNANGRGVPRVPAAALSLQEFWDRFTSGIQXXXXXXXXXXXXXXXXXEAPELPVIIQNVPRDENWGAAQEDAWSFERLDRVYGEVRMKCGEDDDGYSIKVRLKHFVNYVKNQQALSINTKXXXXXXXXXXXXXXDDSPLYIFDSHFDEHDVGKALLQEYRVPSYFPDDLFELVGERRRPPYRWFLVGPKRSGTCCHIDPLGTSAWNTVLVGRKRWVIFPPQMSRSLVKGKTVIRDKEDDEAINYFIEHLPRIRTLAARDTTIKMYEFIQYPGETVFIPGGWWHAVINLDDTVAVTQNFCSRVNFPKVWAKTRGDRKKMAVSWLKRLHVSYPHLAQLAEKMNKDDRFIM 478
[Close]
BLAST of mRNA_M-pyrifera_M_contig104.851.1 vs. uniprot
Match: A0A2D4CAV4_PYTIN (Histone arginine demethylase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAV4_PYTIN)

HSP 1 Score: 400 bits (1027), Expect = 7.570e-131
Identity = 195/343 (56.85%), Postives = 245/343 (71.43%), Query Frame = 1 
Query:   46 DAKKDHRPRLKNWGRDRFGVEGSRA-EKAFEALNWEHGARHDVRGIPRERRNDLTPQDFWEHYEKRRLPVVVSGIPSQEGWRAEERWSLEQLDRRFKDCKLKCGEDDDGYSVKVKVKYFLRYLEQQTDDSPLYVFDSHFDDHEVAKGLLEDFHVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGTSVHIDPLGTSAWNTVLSGRKLWVLFPPHVDKSVARGKEMIRQGEDDEPINYFVDLLPRIRRKY-GDSIKIYEFVQHPGDTVFVPGGWHHAVLNLDDTIAITQNFCSRHNFEKVWRKTRTGRKKMAAKWLRELEKGYPALAETARRLNAEDGFVMETR 1068
            DAK+ HR  +K    +R G  GS   E   ++         D+  I RE  N+L+ + F + YEK  +PVV+ GIP  EGW A + W+L++L   +K   LKCGEDDDG ++++K KYF++YL+ QTDDSPLY+FDS FDD +  K LL+D+ VP YFP+DLF LVGE RRPPYRWFLVGPKRSGT VH+DPLGTSAWNT+L GRK WVLFPP V K + +GK  +  GEDDE +NYF+D+LPRI++      +K  EF+Q+PG TVFVPGGW HAV N++DTIA+TQNFCS  NFE+VWRKTRTGRK+MA KW ++LEK  P LA  A RLN ED F M  +
Sbjct:   72 DAKRRHRSDIKPTEWNREGFAGSNVCELPLDSAT-------DL--IKREHCNNLSLERFIQEYEKPAVPVVIDGIPEAEGWGAVKNWTLKKLRHEYKRANLKCGEDDDGKTIRMKFKYFMKYLKHQTDDSPLYIFDSSFDDRKDTKPLLDDYRVPKYFPEDLFELVGEDRRPPYRWFLVGPKRSGTCVHLDPLGTSAWNTLLVGRKRWVLFPPEVSKHIVKGKNHVLPGEDDEAVNYFMDILPRIKKATPAAELKCVEFMQYPGQTVFVPGGWWHAVFNVEDTIAVTQNFCSSQNFERVWRKTRTGRKRMAVKWFQKLEKHNPRLAAIAFRLNQEDDFTMRNK 405
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104.851.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G461_ECTSI3.250e-22379.82JMJD6 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A7S3GT28_9STRA1.800e-13856.70Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8K1CVA6_PYTOL2.520e-13857.94Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9CR63_9STRA3.890e-13757.58JmjC domain-containing protein n=2 Tax=Monodopsida... [more]
A0A482T184_9ARCH1.870e-13454.36JmjC domain-containing protein (Fragment) n=1 Tax=... [more]
A0A024GP98_9STRA3.610e-13455.33JmjC domain-containing protein n=1 Tax=Albugo cand... [more]
K3X3W1_GLOUD1.280e-13361.69JmjC domain-containing protein n=1 Tax=Globisporan... [more]
A0A0P1AHP6_PLAHL3.020e-13254.32Histone arginine n=1 Tax=Plasmopara halstedii TaxI... [more]
A0A836CFU6_9STRA3.190e-13248.48JMJD6 protein n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A2D4CAV4_PYTIN7.570e-13156.85Histone arginine demethylase, putative n=1 Tax=Pyt... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104contigM-pyrifera_M_contig104:22703..30164 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score635.2
Seed ortholog evalue2.3e-179
Seed eggNOG ortholog2880.D7G461
KEGG koko:K11323
Hectar predicted targeting categoryother localisation
EggNOG free text desc.peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine
EggNOG OGsKOG2130@1,KOG2130@2759
Ec32 ortholog descriptionJumonji domain protein
Ec32 orthologEc-02_001410.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons6
Model size1308
Cds size1308
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104.851.1prot_M-pyrifera_M_contig104.851.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104 22703..30164 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815545.9038408-CDS-M-pyrifera_M_contig104:22702..230281622815545.9038408-CDS-M-pyrifera_M_contig104:22702..23028Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 22703..23028 +
1692277457.612212-CDS-M-pyrifera_M_contig104:22702..230281692277457.612212-CDS-M-pyrifera_M_contig104:22702..23028Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 22703..23028 +
1622815545.9146838-CDS-M-pyrifera_M_contig104:24806..248611622815545.9146838-CDS-M-pyrifera_M_contig104:24806..24861Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 24807..24861 +
1692277457.6219285-CDS-M-pyrifera_M_contig104:24806..248611692277457.6219285-CDS-M-pyrifera_M_contig104:24806..24861Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 24807..24861 +
1622815545.9325447-CDS-M-pyrifera_M_contig104:25600..257851622815545.9325447-CDS-M-pyrifera_M_contig104:25600..25785Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 25601..25785 +
1692277457.630296-CDS-M-pyrifera_M_contig104:25600..257851692277457.630296-CDS-M-pyrifera_M_contig104:25600..25785Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 25601..25785 +
1622815545.942566-CDS-M-pyrifera_M_contig104:27074..272521622815545.942566-CDS-M-pyrifera_M_contig104:27074..27252Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 27075..27252 +
1692277457.6399355-CDS-M-pyrifera_M_contig104:27074..272521692277457.6399355-CDS-M-pyrifera_M_contig104:27074..27252Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 27075..27252 +
1622815545.952722-CDS-M-pyrifera_M_contig104:28417..286061622815545.952722-CDS-M-pyrifera_M_contig104:28417..28606Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 28418..28606 +
1692277457.647821-CDS-M-pyrifera_M_contig104:28417..286061692277457.647821-CDS-M-pyrifera_M_contig104:28417..28606Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 28418..28606 +
1622815545.9651635-CDS-M-pyrifera_M_contig104:29789..301641622815545.9651635-CDS-M-pyrifera_M_contig104:29789..30164Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 29790..30164 +
1692277457.6555552-CDS-M-pyrifera_M_contig104:29789..301641692277457.6555552-CDS-M-pyrifera_M_contig104:29789..30164Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 29790..30164 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104.851.1

>prot_M-pyrifera_M_contig104.851.1 ID=prot_M-pyrifera_M_contig104.851.1|Name=mRNA_M-pyrifera_M_contig104.851.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=436bp
SRSPPRLVRWERRLRDAKKDHRPRLKNWGRDRFGVEGSRAEKAFEALNWE
HGARHDVRGIPRERRNDLTPQDFWEHYEKRRLPVVVSGIPSQEGWRAEER
WSLEQLDRRFKDCKLKCGEDDDGYSVKVKVKYFLRYLEQQTDDSPLYVFD
SHFDDHEVAKGLLEDFHVPSYFPDDLFSLVGERRRPPYRWFLVGPKRSGT
SVHIDPLGTSAWNTVLSGRKLWVLFPPHVDKSVARGKEMIRQGEDDEPIN
YFVDLLPRIRRKYGDSIKIYEFVQHPGDTVFVPGGWHHAVLNLDDTIAIT
QNFCSRHNFEKVWRKTRTGRKKMAAKWLRELEKGYPALAETARRLNAEDG
FVMETRGRRRRDNSDRDSDGSGVNGKRKKKQNKKKSTSRSDSGVEGGGGD
SGSGGSSPKRGRKYGSDVTAEDSLTPPSRSGGGLA*
back to top

mRNA from alignment at M-pyrifera_M_contig104:22703..30164+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104.851.1 ID=mRNA_M-pyrifera_M_contig104.851.1|Name=mRNA_M-pyrifera_M_contig104.851.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7462bp|location=Sequence derived from alignment at M-pyrifera_M_contig104:22703..30164+ (Macrocystis pyrifera P11B4 male)
TCGCGCTCCCCACCACGCTTGGTGCGCTGGGAGCGACGCCTCCGAGACGC
CAAGAAAGATCACCGACCGCGGCTGAAAAATTGGGGGCGGGACAGGTTCG
GTGTCGAGGGAAGCAGAGCCGAAAAAGCGTTTGAGGCGCTGAACTGGGAG
CATGGAGCACGGCACGACGTAAGGGGGATACCTCGAGAGCGTCGAAACGA
TCTGACGCCACAGGACTTCTGGGAGCACTACGAGAAGAGAAGACTCCCGG
TTGTTGTATCGGGCATTCCCTCCCAGGAAGGGTGGAGAGCCGAAGAGCGG
TGGAGCTTGGAACAGCTGGATCGGAGGTGAGCCGAGCCGAGCCGAGCCGA
GGGCTGCGACCGTTGATATCATTATTTTTCGGGGCACGCGAGGCACGTAC
CTCGTATATACAGTTTGGTGTTGATTCAGAGCACGGCTGGAAACTTGCTC
CCTTGTTCGTCGTGAACAACGCCGTACATTAACGCCCTACAGCAGTATGT
ATTGAATTTTACGTGAGAAACCACCCCCGCTGGTACTAAAGTTATTTCGC
GTTTCGTTTTGTTTTTCATCAACCGGGTTGGATTCCCGTTGTCGGGTGGT
ATTTATTACGACGTACGTATAGCGTGTCCGAGGTGATAGGTAATGGGCAA
TTGGCATGAGTTCTTCAATTATTTCCTTATTTGTCATCGTGGGGTGGTTT
CTCGTGGGGGGTGGTGTCGGCGATCGGCGGGGGCTACGTACGAGTATTAC
AGCAGTAGTATTACTGGCATTTCTGATGGGTAAGATTTGCTGCAATCGGC
ACACCTACAAGTATTACTAGTCGTACCTAGCAGAGGCAGCAGAGGCCGCA
GAGGGGGGTGATGCGTTATACCGCAAGCCGCGAAAGATAGCGCCAGTGAG
CTTGCTTCAACAGCGAATGACTACGTAGGAGGTAGGATTTCAAGCATATG
AAAGACTCTCCCAGTCAAATCTGTATTTTGACCCTGAGTGTATTCGTTGT
GCATATCCTGCGCACCCAACTACTGTATAACTGGTAACTGGTATACCGGT
ATGGTATTCTGAACTTCTGGTGTAAATATTTGGAACTCATATTGTATCAT
GCGATGCAAAAACCAATGTTTTTCGTACTGTAAAAGGTAAAGTACCTGGG
TCACAAGCGGGTTTACAAACCTAACCCTAATCCGAATTTACACCGAGGAA
TGGCCACCAAAACAGTTACCTGGTCCCTGGTACCACTACTGTACGAGTTA
ACAGCGTGAGCGCCCAACAGTGCGAGTGTATATCACGATGCTGCGGTGCT
CACGCCTGTCGTACGAGTACGAAAAGAGCTCAGTACATTGCACTTTGGAC
ACACGCGTGTTACAGCCCGGGCTGCTTGCTGTGACCGATGCTGTAGGCGT
GACTTGTTTTTTTTTTAACGTGCTTTCCCTCTGACACACCAAAGGCCGGA
GAGGTTGCAACTCCTGGCACAAGGCAAGTCCAGCGGTATTGATTGAGTTC
TGGCACATATAATATCATACACCAATAATATTCTCGTGAGGTTCAGAAAT
ATACGGCGGGTATGTTGTACCGTACTCGTCTATGTCACGTACGTCGCATG
TGTGTACATTTTTCATACAGTAGTCTATGGTACTATTTGTACATTGTTCT
ATCCATATGCACGTGCAACAAACAAGCGCTCGTGCTTACCGTTATTTTCC
AACTCAAAACCGGTACTGCCTACGTAGTGCCAGAGCTTGGAGTACCACCC
ACTCGTATGGGGTATACCATATATTGATGTATGAGGTGTGGCGGTACCGT
TCTAGTCTGGATCGCGGTGCCTATTAATAGTAATAGTCGAGCCCAATCCC
CGCCCTACATCGAACGCAAAGCGAGCTGGCACCATATTCGAATGAAGTCG
CTGTCCGTGACCACTTGTTCTCGGGCTGTGACGACATACCAGGTAATATA
ATGACATATTAGATGACCTGGTAGATGGCATGGTGTGCGCAAGAGGCCGA
CCCATAGTGTTCAAACTTCCTGGTGTTCTGTGTTTTGCGGCCAAGCACGC
GTCATGTCTACGTCGGTAACCCGGGTAAGAAATGTGACACTTTACCCTTT
TCAGGTTTAAAGATTGCAAGCTCAAGTGCGGAGAAGACGACGATGGCTAC
TCGGTCAAGGTGAGCCGCCAACACACCTGAACAGTAGAGTAGTAGTCGAG
GCTCAGGTCGAAAGTGAAGGATATTAGACTTTGCCTGGTACCCAGTGCTG
AGTTTTCGTTTTCGCTTTCGCACAGTAGTGCAATCCGGTGGAGGCGAGCT
TGGACGTCTGCGTAGTGCGTCGACTCACCAACGATAGCCTGGAGAAGCGT
CCAACTGCGAACAACAACAGCAACAGCGTTTTCGCTCCTTGTGTCGAGAA
TTTGAACCTGCCAAGGCTGACCCAAAACTGACCCCAGAGCCAAGGTTTGA
TCGCGTATGGCCCTGCTTGAGCTGTATAATTGATTCGAAGTGTCCGCATT
CGAATATAGTGCGTGATGCACACAGAGCGTGCGATGCAGGAAGGCTCGCC
ACAAACATTAACATTCTGTTACGTACGCCTCGAAGGCACCGCCTGTAACT
GTTTGTTCGTTCACCTTTATTTTTTCGTTCACCCTTATTTTTCCACTCAC
CCTTACCTACCCGTTCACCCTTTCTTTTTCGTCCCCCTTTACATTTTCCG
TTCACCTTTACTTTTTCCCGTCCACTCTCGCTTTTCCGTGCACACTTATT
TTCCATCCACACTTTTTTTTTTTACGGTCATTATTGAAGGTACCGTCTGC
AAGCTTTTTTCCGTTCACACTTTTCCGTTAACTCTCGAAGGTACCGCCTG
CAAGCAAGATTTTTCCGTTCACACTCGCTTTTCCGTTCACCCTTGAAGGT
AAAGGTGAAGTACTTCTTGCGCTACTTGGAGCAGCAGACAGACGACAGCC
CGCTCTACGTCTTCGACAGTCACTTTGACGACCACGAGGTGGCCAAAGGA
CTTCTCGAGGACTTTCACGTACCCAGCTACTTCCCTGATGACCTGTTTTC
GCTGGTGGGCGAGAGGCGCCGACCACCGTACAGGTGACCCATGCCGAAAG
CCGAAACTATTATGACAGGGCTGTGAGCTGGCTGACTATAAGTCGCGGAG
TAATTATTTGTTGGCTAGGTAGGTTCCATGATTATTATATAGTAGGACTG
TGAGTTGGCTGACTCTAAGTCGCCTATTAGGTACTGGTTGGCTAGATAGG
TTCCATGAGGAGTACATAGGTTTGTGAGTTGGCTGACTATAAGTCGCCGA
GTAGCCGTTGGTTGGCTAGGTACGTTCCGTGATTTGTATATAGGGCTGTG
AGTTGGCTGACAATAAGTCGCCTACCGGTTTTCAGTTGGCTACTAGGTAA
GTCCCATGCTTGGTATATAGGACTGTGAGTTGGCTGACTATTAGCCGCCG
ACTGGCTATTAGTTGTCTAGGTAGGTTCCATGATTAGTGTACAGGGCTGT
GAGTTTGCTGCCTACAAGCCGCCGACGACAGCCGTTATTTGTTGGCAACG
CATGTGTCACCGTTGCTTGCGTGCTGAAAATGCGGAAGTTACCTTTTTTT
TGTATGTGATTCGTAGCGCTGTTGTGGCTCGGCGTGTGCATTTTGTTCGT
AGAGTCAGTTACTTGGCTTACTTCGCCACCCAACTGAGTACATGCCGTCA
ATATCGTTAGCGGTATACCAATCCACAGCTTTAGAAATTAAAGATGTTCT
GGATGAAAGCGCTTTTCTTTGTATTGTCGATTACGGTCGAAGATGCCAGG
AACGGGTCTTTTTGGGCACGTCGAGGCCTCTTTTGGCCTTACTATACTAG
TTTTAGTGTAGGGGGCGGTCAGTCAAGGGGTCAAACCGCGGTCCCCTACG
TATGAAGCATCTATGAATTCGATAACTGCTTTTGTTCCACCAGTGTTTTG
GTACACCTGGTACATGCTAACAAGAGGCGTGTATCAAACGCATGATTAGG
CCCCACGAGGTACCAGGTACAGCTTTGTGAATGGCAGCTATTTTATTCGT
TGGGTGCTGTTGCAGGACAGGATTGTCGGGGGTGGCATGCTCGCTATTCG
CACCCGCTCTTCGGTCGCTTCCGTTGAAGCCACTCACAGTGTGTCGCGCT
TTTGACCCGCCACGGTATCTCGTGGTGTCACGTACCATTTGGTAAGGTAT
TGTAGCTCTTGCTCGTTCACCTCTGCCTCGTCAAGCATGCACAGTTGTAC
TCGTGAATCGAGTTGGCACAGTTGAACAGCGGCGCTCGATCCAACATACA
CACATTTTTTTTGTTGTCTCACTTTCCCTTCCCTTCTCTTCCTCTTGCGC
CTTTTGCCCTTGCCGAGTAAAGGTGGTTCTTGGTCGGCCCCAAGCGATCC
GGGACGTCCGTGCACATAGACCCGCTCGGTACAAGCGCGTGGAACACGGT
ATTGAGTGGTCGGAAGCTGTGGGTGTTGTTTCCGCCGCACGTGGATAAGA
GTGTGGCCAGGGGAAAGGAGATGATCAGGCAGGGCGAGGACGACGAGCCG
GTGAGAGTAAATACGCGCGCGGCCGGACATGGATGCTGAACAGAGAAGGC
CTGTTGGTGTCAAAGGCTAGGGGCAGAAGCGCTAAACTACAAGTAGATGC
GGGGGTGCGAATCCTGCCAGCCACGCATTTTCTGCCCGACTGCAGTACCT
ACCATCTGATCTATAGCCGAACAGCAGGGCGCATGCGGGGCAATTTCTTA
GTCCCCGCCGTTATTACAGTAGGTAAATATGCGCCAGAGGCTCGATTGTT
TTAGGTCCTTCTCCGGAAATGTGGAGCGTGTGGACAAGATAGGCGAGCTC
TTAGCTCGGAAATATCTCGCGCGGGTGGATATTTGTAACTGTCGTCAACC
ATCGTCAATTACGAGTATCGTGTGCCCTGGTGGAAGGCATTTTTTTCAGG
GATAACGCTTTTTGGGAATTTTTTGGTCGCGGACGGCGCGCGGTCCTGCT
CCTGTAACTGTCGCTGTAACTGGTGATGTCGCACCTTTCCTTTCTTGTCC
AGGTTGAGGTTGGCCGGATTTTTATTTTACGGGCGCTCCCGGTGTGTGGG
TATACTATGGGTTTCAGGATTTTAGGGAGGCCACTATACTATGTAAATCC
CGTACTCGTAGTACGCGCGATCAAAGCATATACCGCACGCAGCTTGCCAA
GATGAGATATTCAACGAAACTCTCGATATCATAGCTGAGGGTTTTTTTTT
ATTTATATATATACCAGGTATATGAATTCCGTCACTTTTGGACAACGTGT
ATGGCGCCTCCTATACGATTGGAGTTGGACTACTGTACGTGCATGGGTTT
CCTTCTTTGGTTTCCCTTAGTTTTGTTCGTTCTGAACATGTTTACGAGTG
ATCGACGTTGACGAAGCTTATTCTGCACATTGTTGGCTGGCGAACATGAT
AGTGACGAGGCAAATGCAAAGTTCTTGTTTTGACGGCGTCACAAAATTGG
GACCCCTTAAGAAATGGCTGAAGCAGATTTTGCTTGATTCTAAAGCGGGA
TTTTCGACCGAAATTTATACCTCGTATGAGGTTTCAAAGGGATAAAACAA
CCGCCAACGCACACAAGTTGACGGCAGTTGCAAATTTCCTACCGCACGAT
CTCCTAGCGACAGATCATTATCTTTGCTAATCGTATCACGCACACTAACC
TGACGTTATCGACAGATTAACTACTTCGTGGACCTGCTTCCTCGGATACG
ACGCAAGTACGGGGACTCTATCAAGATCTATGAGTTCGTGCAGCACCCCG
GCGACACCGTCTTCGTCCCCGGAGGGTGGCACCACGCAGTGCTCAACCTG
GACGATACCATCGCCATCACGCAAAACTTTTGCAGCCGCCACAACTTCGA
GAAAGTGAGCGCTCGTGTCATGGTCATCGACATAAGCACGAACATTAACA
AAATCACCACGCACAATTTTTGCCCCCGAAATAAAGTAGCGATTCACCGG
CATATGAGAAAGTTGGCACGCGTGTGTGTGACTTGAACAAAAGCATCACA
TGTTGCAACCGAAGACAGTTTTTGAGAATTTGAGCACGGCATGTGACGAC
ATGAACACAACGTAGCCCCGGCTTCCAATTTCGGGTGGGTTGACGCCACA
AGACTTCTTCGTATGAAACTCTTTCACGATAGTCCGCACCTTCTTTTCCA
AGGCATTCACTCCACACGAAACTAGTAGTTGGAAGATTGCCGATCAAACC
ATTGGACTACGTTTATGGCATTTTTTCAATGCCCAATGCACAACTACTAC
GACAGTAAAAAAAAAATTGCCGCAACTTTAACTGTTGCAGCCAAATTAGT
TATGAGAAGGTGAAGCGAGCGAGCGTATGACTGAACAGAACAAAAACGTG
CGAACAATGATTTTGAGATTTGCTTGTGATTTGCTTGGCGTTCGTACCCT
GTGTTTGGTGTCATCCGGGGTGGCATGCTTCGTGCGAGCGGGAGTTTTAC
TTTTCCGGCTTCCTGCCTGTGTACGGTACAGGTCAGCTACTTGGAAACGA
CCACTGGGAACGGTCGCGCTGATATTTATGGGAAAATCCGAAACTCGGGA
GTCGTTCTACTGAAGTTAGCGTAAACCCACCCATTCTCAACTATGACATT
CAGCCTGGACTAGCTTTCCTTTTTTGCTGTAGGTGTCCTGTACTGGAACT
GTGTACACGGTGGCTGGTGTTGTTTTCTCGTGGTGTTATTTTCTCGTGCA
GCTGCAAGCTGCCTCTCTACGAATATCCAGGTCCGGTTTCAAGGACTCAA
GTCCTCGTGGTATCAGGTCGGCGTGGGATCCGAGTGCCAAGTGGGCAAAC
CCTCAATTTTCAATTGTCCTATATTGCATAAATGCGTCCTCGTTGACAAC
GCCGAATGTTTGGCTCGCCCAAACTGGTGCGTTTTTCTGCCCACCCACTT
TTTCTCTCGCTTCACACATTCGCTGCGTGAATCTGTTCTTCACGCATGCC
AGTCCACGTGCGGGTGATGCCAAAGCAAAAGTCAGTATCACCATTCACCC
CTCGCCATTATTTTGTGCTCCCCCCATCCCCAAACAGGTGTGGCGAAAGA
CTCGAACGGGCCGAAAAAAGATGGCCGCCAAGTGGCTTCGAGAACTGGAG
AAAGGGTACCCCGCACTCGCGGAGACAGCCCGCCGTTTGAACGCCGAGGA
CGGCTTTGTCATGGAAACCAGGGGGAGGAGACGGCGGGACAACAGCGACC
GAGATAGCGATGGCAGCGGGGTCAACGGCAAGCGAAAAAAGAAGCAAAAC
AAGAAGAAGAGTACGAGTAGGAGCGACAGTGGGGTCGAGGGAGGTGGGGG
CGATTCGGGGAGCGGGGGTTCTTCCCCCAAGAGGGGGCGCAAGTACGGCA
GCGATGTTACCGCGGAGGATTCTCTTACACCGCCCTCGCGCAGTGGTGGC
GGCCTCGCGTAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig104:22703..30164+

>mRNA_M-pyrifera_M_contig104.851.1 ID=mRNA_M-pyrifera_M_contig104.851.1|Name=mRNA_M-pyrifera_M_contig104.851.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2616bp|location=Sequence derived from alignment at M-pyrifera_M_contig104:22703..30164+ (Macrocystis pyrifera P11B4 male)
TCGCGCTCCCCACCACGCTTGGTGCGCTGGGAGCGACGCCTCCGAGACGC
CAAGAAAGATCACCGACCGCGGCTGAAAAATTGGGGGCGGGACAGGTTCG
GTGTCGAGGGAAGCAGAGCCGAAAAAGCGTTTGAGGCGCTGAACTGGGAG
CATGGAGCACGGCACGACGTAAGGGGGATACCTCGAGAGCGTCGAAACGA
TCTGACGCCACAGGACTTCTGGGAGCACTACGAGAAGAGAAGACTCCCGG
TTGTTGTATCGGGCATTCCCTCCCAGGAAGGGTGGAGAGCCGAAGAGCGG
TGGAGCTTGGAACAGCTGGATCGGAGTCGCGCTCCCCACCACGCTTGGTG
CGCTGGGAGCGACGCCTCCGAGACGCCAAGAAAGATCACCGACCGCGGCT
GAAAAATTGGGGGCGGGACAGGTTCGGTGTCGAGGGAAGCAGAGCCGAAA
AAGCGTTTGAGGCGCTGAACTGGGAGCATGGAGCACGGCACGACGTAAGG
GGGATACCTCGAGAGCGTCGAAACGATCTGACGCCACAGGACTTCTGGGA
GCACTACGAGAAGAGAAGACTCCCGGTTGTTGTATCGGGCATTCCCTCCC
AGGAAGGGTGGAGAGCCGAAGAGCGGTGGAGCTTGGAACAGCTGGATCGG
AGGTTTAAAGATTGCAAGCTCAAGTGCGGAGAAGACGACGATGGCTACTC
GGTCAAGGTTTAAAGATTGCAAGCTCAAGTGCGGAGAAGACGACGATGGC
TACTCGGTCAAGGTAAAGGTGAAGTACTTCTTGCGCTACTTGGAGCAGCA
GACAGACGACAGCCCGCTCTACGTCTTCGACAGTCACTTTGACGACCACG
AGGTGGCCAAAGGACTTCTCGAGGACTTTCACGTACCCAGCTACTTCCCT
GATGACCTGTTTTCGCTGGTGGGCGAGAGGCGCCGACCACCGTACAGGTA
AAGGTGAAGTACTTCTTGCGCTACTTGGAGCAGCAGACAGACGACAGCCC
GCTCTACGTCTTCGACAGTCACTTTGACGACCACGAGGTGGCCAAAGGAC
TTCTCGAGGACTTTCACGTACCCAGCTACTTCCCTGATGACCTGTTTTCG
CTGGTGGGCGAGAGGCGCCGACCACCGTACAGGTGGTTCTTGGTCGGCCC
CAAGCGATCCGGGACGTCCGTGCACATAGACCCGCTCGGTACAAGCGCGT
GGAACACGGTATTGAGTGGTCGGAAGCTGTGGGTGTTGTTTCCGCCGCAC
GTGGATAAGAGTGTGGCCAGGGGAAAGGAGATGATCAGGCAGGGCGAGGA
CGACGAGCCGGTGGTTCTTGGTCGGCCCCAAGCGATCCGGGACGTCCGTG
CACATAGACCCGCTCGGTACAAGCGCGTGGAACACGGTATTGAGTGGTCG
GAAGCTGTGGGTGTTGTTTCCGCCGCACGTGGATAAGAGTGTGGCCAGGG
GAAAGGAGATGATCAGGCAGGGCGAGGACGACGAGCCGATTAACTACTTC
GTGGACCTGCTTCCTCGGATACGACGCAAGTACGGGGACTCTATCAAGAT
CTATGAGTTCGTGCAGCACCCCGGCGACACCGTCTTCGTCCCCGGAGGGT
GGCACCACGCAGTGCTCAACCTGGACGATACCATCGCCATCACGCAAAAC
TTTTGCAGCCGCCACAACTTCGAGAAAATTAACTACTTCGTGGACCTGCT
TCCTCGGATACGACGCAAGTACGGGGACTCTATCAAGATCTATGAGTTCG
TGCAGCACCCCGGCGACACCGTCTTCGTCCCCGGAGGGTGGCACCACGCA
GTGCTCAACCTGGACGATACCATCGCCATCACGCAAAACTTTTGCAGCCG
CCACAACTTCGAGAAAGTGTGGCGAAAGACTCGAACGGGCCGAAAAAAGA
TGGCCGCCAAGTGGCTTCGAGAACTGGAGAAAGGGTACCCCGCACTCGCG
GAGACAGCCCGCCGTTTGAACGCCGAGGACGGCTTTGTCATGGAAACCAG
GGGGAGGAGACGGCGGGACAACAGCGACCGAGATAGCGATGGCAGCGGGG
TCAACGGCAAGCGAAAAAAGAAGCAAAACAAGAAGAAGAGTACGAGTAGG
AGCGACAGTGGGGTCGAGGGAGGTGGGGGCGATTCGGGGAGCGGGGGTTC
TTCCCCCAAGAGGGGGCGCAAGTACGGCAGCGATGTTACCGCGGAGGATT
CTCTTACACCGCCCTCGCGCAGTGGTGGCGGCCTCGCGTAAGTGTGGCGA
AAGACTCGAACGGGCCGAAAAAAGATGGCCGCCAAGTGGCTTCGAGAACT
GGAGAAAGGGTACCCCGCACTCGCGGAGACAGCCCGCCGTTTGAACGCCG
AGGACGGCTTTGTCATGGAAACCAGGGGGAGGAGACGGCGGGACAACAGC
GACCGAGATAGCGATGGCAGCGGGGTCAACGGCAAGCGAAAAAAGAAGCA
AAACAAGAAGAAGAGTACGAGTAGGAGCGACAGTGGGGTCGAGGGAGGTG
GGGGCGATTCGGGGAGCGGGGGTTCTTCCCCCAAGAGGGGGCGCAAGTAC
GGCAGCGATGTTACCGCGGAGGATTCTCTTACACCGCCCTCGCGCAGTGG
TGGCGGCCTCGCGTAA
back to top