mRNA_M-pyrifera_M_contig104.850.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig104.850.1
Unique NamemRNA_M-pyrifera_M_contig104.850.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig104.850.1 vs. uniprot
Match: A0A6H5JL27_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL27_9PHAE)

HSP 1 Score: 691 bits (1783), Expect = 1.240e-250
Identity = 334/365 (91.51%), Postives = 354/365 (96.99%), Query Frame = 1
Query:    1 MADAAYGGGAAAAPSMDSSVPCKDSRDTLYSFDEAKLDLIRKTKPWTQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAQGGKPVEIMGMMLGRPDTETTNALIVTDVFPLPVEGAETKVLADDQEVANYMIDLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFSAPLNETPDGKIVTDDTQRVELWGSCWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDLHMTHGAGGNVSGYLMADTSSNKPREESALSKTTHGSSELAIEHCQGQMTQITKSIVFGLK 1095
            MAD AYGGGAAAAPS+++S P KDSRD+LYSFDEAKL+L RKTKPW QDPKYFKKVKISPSAAMKMLMHANSGVEKGMA GGKPVEIMGMMLGRPDTET NALIVTDVFPLPVEGAETKVLADDQEVANYMI LGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEF+APLNETPDGKIVTDD+QRVELWG+CWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILE+ENRERFSERIGNVADKVEHCD+HM HGAG +VSGY++AD++++KP+EESA+SK THGSSELAIEHCQGQMTQITKSIVFG+K
Sbjct:    1 MADTAYGGGAAAAPSVETSAPSKDSRDSLYSFDEAKLELTRKTKPWMQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAAGGKPVEIMGMMLGRPDTETPNALIVTDVFPLPVEGAETKVLADDQEVANYMIGLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFNAPLNETPDGKIVTDDSQRVELWGACWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILESENRERFSERIGNVADKVEHCDVHMNHGAGASVSGYVVADSAASKPKEESAISKATHGSSELAIEHCQGQMTQITKSIVFGIK 365          
BLAST of mRNA_M-pyrifera_M_contig104.850.1 vs. uniprot
Match: A0A836CH01_9STRA (COP9 signalosome complex subunit 5A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH01_9STRA)

HSP 1 Score: 485 bits (1248), Expect = 2.150e-168
Identity = 236/350 (67.43%), Postives = 276/350 (78.86%), Query Frame = 1
Query:   40 PSMDSSVPCKDSRDTLYSFDEAKLDLIRKTKPWTQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAQGGKPVEIMGMMLGRPDTETTNALIVTDVFPLPVEGAETKVLADDQEVANYMIDLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFSAPLNETPDGKIVTDDTQRVELWGSCWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDLHMTHGAGGNVSGYLMADTSSNKPREESALSKTTHGSSELAIEHCQGQMTQITKSIVFG 1089
            P    +VP   S D+LYSFDE  L  +R+ KPW  DPKYFKKVKISPSAAMKMLMHANSGVEKG+ +GGKPVEIMG++LGRPD E   +L+VTDVFPLP+EGAET+VLADD EV NYMI+LG+ LE+TRKERFMGWYHSHPF+VE HSHCFLSSTD+STQLSWQRAEDPHGNPWLAIVVDPLRSLAK RPEFGAFR YPPE++AP NETPDGK+V DDTQRVE WG+CW+RY ++E+EYFMSSLAS VMG LTENFLWMR L STP+LE EN+ER  E +  + DK++      T  AG  +    +          +SAL KTT  S++LA+EHC  Q +Q  K+ +FG
Sbjct:   26 PLAPPAVPASSS-DSLYSFDEESLRKVREAKPWATDPKYFKKVKISPSAAMKMLMHANSGVEKGIKKGGKPVEIMGLLLGRPDMEA-RSLVVTDVFPLPIEGAETRVLADDAEVTNYMIELGESLESTRKERFMGWYHSHPFEVEAHSHCFLSSTDLSTQLSWQRAEDPHGNPWLAIVVDPLRSLAKGRPEFGAFRAYPPEYAAPPNETPDGKVVMDDTQRVERWGTCWDRYCALEVEYFMSSLASTVMGTLTENFLWMRALSSTPLLERENQERVCESMAVLGDKLKQAGTTFTFRAGHTMDANAVGKAGGKD--SDSALQKTTDMSADLAVEHCIEQSSQAIKAAIFG 371          
BLAST of mRNA_M-pyrifera_M_contig104.850.1 vs. uniprot
Match: A0A6G0WS84_9STRA (MPN domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WS84_9STRA)

HSP 1 Score: 481 bits (1238), Expect = 1.510e-167
Identity = 230/347 (66.28%), Postives = 280/347 (80.69%), Query Frame = 1
Query:   70 DSRDTLYSFDEAKLDLIRKTKPWTQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAQ-GGKPVEIMGMMLGRPDTETTN--ALIVTDVFPLPVEGAETKVLADDQEVANYMIDLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFSAPLNETPDGKIVTDDTQRVELWGSCWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDLHMTHGAGG----NVSGYLMADTSSNKPREESALSKTTHGSSELAIEHCQGQMTQITKSIVFG 1089
            +S D+LY+++E +++ +R  K W+QDPKYFK+V++SPSA MKML HA SGVEKGM+  GGKPVEIMG++LGRP T+  N   LIVTD FPLP+EGAETKVLADDQEV NYMI LG+ +ETTRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIV+DPLRSLAK RPE GAFR YPPEF+APLNETPDG+IVTDDT RVE WGSCWNRYY++EIEYFMS++ S+V+ +L+E FLWMRTL STP+LE ENRERFSERIG +A K+E C+  ++         N   Y+   + ++   EES L K T  ++EL+IE CQGQ  Q+TK+ +F 
Sbjct:   26 NSGDSLYTWNEDRVNEVRSNKQWSQDPKYFKRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEIMGLLLGRPSTDPANLNCLIVTDAFPLPIEGAETKVLADDQEVMNYMISLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEFAAPLNETPDGQIVTDDTARVERWGSCWNRYYALEIEYFMSNMGSNVLSVLSEKFLWMRTLSSTPMLERENRERFSERIGLLATKLEGCESVVSSSKAFSSRMNYGYYVPESSKASSANEESTLDKCTQAANELSIEQCQGQAMQVTKAHLFN 372          
BLAST of mRNA_M-pyrifera_M_contig104.850.1 vs. uniprot
Match: A0A1V9YMP0_9STRA (COP9 signalosome complex subunit 5 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMP0_9STRA)

HSP 1 Score: 480 bits (1235), Expect = 4.010e-167
Identity = 227/350 (64.86%), Postives = 278/350 (79.43%), Query Frame = 1
Query:   61 PCKDSRDTLYSFDEAKLDLIRKTKPWTQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAQ-GGKPVEIMGMMLGRPDTETTN--ALIVTDVFPLPVEGAETKVLADDQEVANYMIDLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFSAPLNETPDGKIVTDDTQRVELWGSCWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDL----HMTHGAGGNVSGYLMADTSSNKPREESALSKTTHGSSELAIEHCQGQMTQITKSIVFG 1089
            P  +S D LY+++E +L+ +R  K W+QDPKYF++V++SP+A MKML HA SGVEKGM+  GGKPVE+MG++LGRP T+  N   L+VTD FPLPVEGAET+VLADD EV NYMI LG+ +ETTRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIVVDPLRSLAK RPE GAFR YPPE++ P+NETPDG +VTDDT RVE WGSCWNRYY++E+EYFMS+L S+V+ +LTE FLWMRTL STP+LE ENRERFSERIG +A K+E C+     H   G+    SGY + D+S     E+SAL K    ++EL++EHC GQ  Q+ K ++F 
Sbjct:   21 PKANSGDGLYAWNEDRLNEVRANKLWSQDPKYFRRVQVSPAATMKMLSHAQSGVEKGMSSPGGKPVEVMGLLLGRPSTDPANLNTLVVTDAFPLPVEGAETRVLADDAEVINYMISLGEAIETTRKEKFMGWYHSHPFDVEVLSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVVDPLRSLAKKRPEMGAFRAYPPEYAPPVNETPDGTLVTDDTARVERWGSCWNRYYALEVEYFMSTLGSNVLSVLTEKFLWMRTLSSTPMLERENRERFSERIGALATKLEGCEAAVASHKGFGSARMSSGYYVPDSSKAAAAEDSALDKCAQAAAELSLEHCHGQTLQVAKQMIFN 370          
BLAST of mRNA_M-pyrifera_M_contig104.850.1 vs. uniprot
Match: A0A1W0A9N7_9STRA (COP9 signalosome complex subunit 5 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9N7_9STRA)

HSP 1 Score: 467 bits (1201), Expect = 4.950e-162
Identity = 226/345 (65.51%), Postives = 275/345 (79.71%), Query Frame = 1
Query:   79 DTLYSFDEAKLDLIRKTKPWTQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAQ-GGKPVEIMGMMLGRPDTETTN--ALIVTDVFPLPVEGAETKVLADDQEVANYMIDLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFSAPLNETPDGKIVTDDTQRVELWGSCWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDLHMTH----GAGGNVSGYLMADTS-SNKPREESALSKTTHGSSELAIEHCQGQMTQITKSIVFG 1089
            D LY ++E +L+ +R  K WTQDPKYF++V++SPSA MKML HA SGVEKGM+  GGKPVE+MG+++GRP T+  N   LIVTD FPLPVEGAET+VLADD EV NYMI LG+ +ETTRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIV+DPLRSLAK RPE GAFR YPPE++ P+NETPDG+  TD T RVE WGSCWNRYY++EI+YFMSSL S+V+ +L+E FLWMRTL STP+LE ENRERFS+RIG +A+K+  C+  ++     G+    SGY + DTS +    EESAL K T  ++EL+IEHCQGQ  Q+ K  +F 
Sbjct:   23 DGLYLWNEERLNEVRANKLWTQDPKYFRRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEVMGLLIGRPSTDPNNLNTLIVTDAFPLPVEGAETRVLADDAEVINYMISLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEYAPPVNETPDGQ--TDSTARVERWGSCWNRYYALEIQYFMSSLGSNVLSVLSEKFLWMRTLSSTPMLERENRERFSDRIGLLANKLHGCETLISSQKNFGSARMSSGYYVPDTSKTTSSTEESALDKCTQAANELSIEHCQGQALQVAKQTIFN 365          
BLAST of mRNA_M-pyrifera_M_contig104.850.1 vs. uniprot
Match: A0A067CCG5_SAPPC (MPN domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CCG5_SAPPC)

HSP 1 Score: 466 bits (1200), Expect = 7.810e-162
Identity = 223/345 (64.64%), Postives = 273/345 (79.13%), Query Frame = 1
Query:   79 DTLYSFDEAKLDLIRKTKPWTQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAQ-GGKPVEIMGMMLGRPDTETT--NALIVTDVFPLPVEGAETKVLADDQEVANYMIDLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFSAPLNETPDGKIVTDDTQRVELWGSCWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDLHMTH----GAGGNVSGYLMADTSSNKPR-EESALSKTTHGSSELAIEHCQGQMTQITKSIVFG 1089
            D LYS+ + +L  +R  K W+QDPKYF++V++SP+A MKML HA SGVEKGM+  GGKPVEIMG+++GRP T+ +  N L+VTD FPLP+EGAET+VLADD EV NYMI LG+  E TRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIVVDPLRSLAK RPE GAFR YPPE++ P+NETPDG +VTDDT RVE WGSCWNRYY++E+EYFMSSL S+V+ +LTE FLWMRTL STP+LE ENRERFSERI  +A K++ C+  ++     G+    SGY + D+S   P  E+SAL K T  ++EL++EHC GQ  Q+ K  +F 
Sbjct:   24 DALYSWSDDRLSEVRGNKLWSQDPKYFRRVQVSPAATMKMLSHAQSGVEKGMSSPGGKPVEIMGLLMGRPSTDPSSPNTLVVTDAFPLPIEGAETRVLADDAEVINYMISLGEATEITRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVVDPLRSLAKKRPEMGAFRAYPPEYAPPVNETPDGTLVTDDTARVERWGSCWNRYYALEVEYFMSSLGSNVLSVLTEKFLWMRTLSSTPMLERENRERFSERIALLATKLDGCESMVSSQRGFGSSRMSSGYYVPDSSKAAPATEDSALDKCTQAANELSMEHCHGQTLQVAKQKLFN 368          
BLAST of mRNA_M-pyrifera_M_contig104.850.1 vs. uniprot
Match: W4GHR5_9STRA (MPN domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHR5_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 2.250e-160
Identity = 228/365 (62.47%), Postives = 279/365 (76.44%), Query Frame = 1
Query:   73 SRDTLYSFDEAKLDLIRKTKPWTQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAQ-GGKPVEIMGMMLGRPDTETTN--ALIVTDVFPLPVEGAETKVLADDQEVANYMIDLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFSAPLNETPDGKIVTDDTQRVELWGSCWNRY------------------YSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDLHMTHGAGGNVS---GYLMADT--SSNKPREESALSKTTHGSSELAIEHCQGQMTQITKSIVFG 1089
            S D+LY+++E +++ +R  K W+ DPKYF++V++SPSA MKML HA SGVEKGM+  GGKPVEIMG++LGRP T+  N   LIVTD FPLP+EGAETKVLADDQEV NYMI LG+ +ETTRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIV+DPLRSLAK RPE GAFR YPPEF+AP+NETPDG+IVTDDT RVE WGSCWNRY                  Y++EIEYFMS+L ++V+G+L+E FLWMRTL STP LE ENRERFSERIG +A K++ C+  + +  G +     GY + DT  ++    E+SAL K T  ++EL+IE   GQ  Q+ K I+F 
Sbjct:   30 SGDSLYTWNEDRVNEVRSNKQWSHDPKYFRRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEIMGLLLGRPSTDPANLNTLIVTDAFPLPIEGAETKVLADDQEVMNYMISLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEFAAPVNETPDGQIVTDDTARVERWGSCWNRYCTQVLVGDDSTRLFVIRYYALEIEYFMSTLGANVLGVLSEKFLWMRTLSSTPTLERENRERFSERIGGLATKLDGCEASVGNAKGYSSRMNFGYYVPDTLKTAAASNEDSALDKCTQAANELSIEQLHGQTMQVAKQILFN 394          
BLAST of mRNA_M-pyrifera_M_contig104.850.1 vs. uniprot
Match: A0A8K1FRA5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRA5_PYTOL)

HSP 1 Score: 460 bits (1183), Expect = 2.420e-159
Identity = 221/344 (64.24%), Postives = 264/344 (76.74%), Query Frame = 1
Query:   79 DTLYSFDEAKLDLIRKTKPWTQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAQGGKPVEIMGMMLGRPDTET------TNALIVTDVFPLPVEGAETKVLADDQEVANYMIDLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFSAPLNETPDGKIVTDDTQRVELWGSCWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDLHMT-HGAGGNVSGYLMADTSSNKPREESALSKTTHGSSELAIEHCQGQMTQITKSIVFG 1089
            D  Y  DE  L  +R  K W QDPKYFKKV +SPSAAMKM+ HA+SGVEKG+  GGKPVEIMG+MLGRP T T         LIVTD FPLP+EGAET+VLADD EV NYMI LG+ +E TRKERFMGWYHSHPFDVEVHSHCFLS+TD+STQL WQR+EDP+GNPWLA+V+DPLRSLAK RPE GAFRVYPPE++AP+NETPDG IVTD+T R+E WGSCWNRYY++E++YFMSSL S ++ IL+E FLWMRTL S  + E ENR+RFSERI  +A+K++ C+ H+   G    +  Y + +   NK  EESAL K T  ++ELAIEH  GQ  Q+ K  +F 
Sbjct:   17 DAAYGVDEEVLKDVRANKVWMQDPKYFKKVIVSPSAAMKMMNHAHSGVEKGIKNGGKPVEIMGLMLGRPSTGTDRDVGDAQTLIVTDCFPLPIEGAETRVLADDAEVINYMISLGEAVEQTRKERFMGWYHSHPFDVEVHSHCFLSATDVSTQLQWQRSEDPNGNPWLAVVLDPLRSLAKKRPEMGAFRVYPPEYTAPVNETPDGTIVTDETTRMERWGSCWNRYYTLEVDYFMSSLGSQIVNILSEEFLWMRTLSSNTMQERENRDRFSERIQLLANKLDGCESHLAPRGRNARIGDYYVPEKQ-NKESEESALDKITQAANELAIEHSHGQELQLAKKALFN 359          
BLAST of mRNA_M-pyrifera_M_contig104.850.1 vs. uniprot
Match: A0A3R6WPI2_9STRA (MPN domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A3R6WPI2_9STRA)

HSP 1 Score: 460 bits (1184), Expect = 1.020e-158
Identity = 228/362 (62.98%), Postives = 274/362 (75.69%), Query Frame = 1
Query:   73 SRDTLYSFDEAKLDLIRKTKPWTQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAQ-GGKPVEIMGMMLGRPDTETTN--ALIVTDVFPLPVEGAETKVLADDQEVANYMIDLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFSAPLNETPDGKIVTDDTQRVELWGSCWNR---------------YYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDLHMTHGAGGNVS---GYLMADT--SSNKPREESALSKTTHGSSELAIEHCQGQMTQITKSIVFG 1089
            S D LY+++E +++ IR  K W+QDPKYF++V++SPSA MKML HA SGVEKGM+  GGKPVE+MG++LGRP T+  N   LIVTD FPLP+EGAETKVLADDQEV NYMI LG+ +ETTRKE+FMGWYHSHPFDVEV SHCFLSSTD+STQL WQR+EDPHGNPWLAIV+DPLRSLAK RPE GAFR YPPEF+AP+NETPDG+IVTDDT RVE WGSCWNR               YY++EIEYFMS+L ++V+G+L+E FLWMRTL STP LE ENRERFSERI  +A K++ CD  ++H          GY + D    S    EESAL K T  +++L+IE   GQ  Q+ K  +F 
Sbjct:   52 SGDNLYAWNEDRVNEIRTNKQWSQDPKYFRRVQVSPSATMKMLSHAQSGVEKGMSSPGGKPVEVMGLLLGRPSTDPANLNTLIVTDAFPLPIEGAETKVLADDQEVMNYMITLGEAIETTRKEKFMGWYHSHPFDVEVTSHCFLSSTDLSTQLQWQRSEDPHGNPWLAIVIDPLRSLAKKRPEMGAFRAYPPEFAAPVNETPDGQIVTDDTARVERWGSCWNRFAWPSVDRSHGHQRRYYALEIEYFMSTLGANVLGVLSEKFLWMRTLSSTPTLERENRERFSERIVGLATKLDGCDASVSHTKSYPSRMNLGYYVPDAIKPSAAANEESALDKCTQAANDLSIEQLHGQSLQVAKQFLFN 413          
BLAST of mRNA_M-pyrifera_M_contig104.850.1 vs. uniprot
Match: H3HDB3_PHYRM (MPN domain-containing protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=H3HDB3_PHYRM)

HSP 1 Score: 457 bits (1176), Expect = 3.110e-158
Identity = 220/349 (63.04%), Postives = 268/349 (76.79%), Query Frame = 1
Query:   79 DTLYSFDEAKLDLIRKTKPWTQDPKYFKKVKISPSAAMKMLMHANSGVEKGMAQGGKPVEIMGMMLGRPDTET------TNALIVTDVFPLPVEGAETKVLADDQEVANYMIDLGDLLETTRKERFMGWYHSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAKSRPEFGAFRVYPPEFSAPLNETPDGKIVTDDTQRVELWGSCWNRYYSMEIEYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKVEHCDLHMTHGAGGNVSG----YLMADTSSNKPREESALSKTTHGSSELAIEHCQGQMTQITKSIVFGLK 1095
            D  Y+FDE  L  +R  K W QDPKYFKKV +SP+A MKML HANSGVEKG+  GGKPVEIMG+++GRP T T       + L+VTD FPLP+EGAET+VLADD EV NYMI LG+ +E TRKE+FMGWYHSHPFDVEVHSHCFLS+TD+STQL WQR+EDPHGNPWLAIV+DPLRSLAK RPE GAFRVYPP+F+AP+NETPDG IVTD++ R+E WG+CWNRYY++EI+YFMS+L S V+ +L+E FLWMRTL S  + E ENR+RFSERI  +A+K++ C+ H+    G   S     Y+     S+K  EESAL K T  ++ELAIE+  GQ  Q+TK  +F  K
Sbjct:   17 DAAYAFDEEVLKDVRNNKVWMQDPKYFKKVIVSPAATMKMLNHANSGVEKGIKAGGKPVEIMGLIMGRPSTGTDRDAGDAHTLVVTDCFPLPIEGAETRVLADDAEVINYMISLGEAVEQTRKEKFMGWYHSHPFDVEVHSHCFLSATDVSTQLQWQRSEDPHGNPWLAIVLDPLRSLAKKRPEMGAFRVYPPDFAAPVNETPDGTIVTDESARLERWGNCWNRYYTLEIDYFMSTLGSQVVSVLSEEFLWMRTLSSNTMQERENRDRFSERIQLLANKLDGCEAHLMPRTGRGASRIGEYYVPEKQHSHKEAEESALDKITQAANELAIENSLGQELQVTKKALFNDK 365          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig104.850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL27_9PHAE1.240e-25091.51MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CH01_9STRA2.150e-16867.43COP9 signalosome complex subunit 5A n=1 Tax=Tribon... [more]
A0A6G0WS84_9STRA1.510e-16766.28MPN domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A1V9YMP0_9STRA4.010e-16764.86COP9 signalosome complex subunit 5 n=1 Tax=Achlya ... [more]
A0A1W0A9N7_9STRA4.950e-16265.51COP9 signalosome complex subunit 5 n=1 Tax=Thraust... [more]
A0A067CCG5_SAPPC7.810e-16264.64MPN domain-containing protein n=2 Tax=Saprolegnia ... [more]
W4GHR5_9STRA2.250e-16062.47MPN domain-containing protein n=8 Tax=Aphanomyces ... [more]
A0A8K1FRA5_PYTOL2.420e-15964.24Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R6WPI2_9STRA1.020e-15862.98MPN domain-containing protein n=3 Tax=Aphanomyces ... [more]
H3HDB3_PHYRM3.110e-15863.04MPN domain-containing protein n=25 Tax=Peronospora... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig104contigM-pyrifera_M_contig104:10635..22340 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score690.3
Seed ortholog evalue5e-196
Seed eggNOG ortholog2880.D7G460
Preferred nameRRI1
KEGG koko:K09613
Hectar predicted targeting categoryother localisation
GOsGO:0000338,GO:0000749,GO:0000754,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008180,GO:0008233,GO:0008234,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0010893,GO:0016787,GO:0019216,GO:0019218,GO:0019222,GO:0019236,GO:0019538,GO:0019783,GO:0019784,GO:0023051,GO:0023058,GO:0031136,GO:0031137,GO:0031139,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032443,GO:0032991,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043900,GO:0043902,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045834,GO:0045940,GO:0046889,GO:0046890,GO:0046999,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051716,GO:0062012,GO:0062013,GO:0065007,GO:0070011,GO:0070452,GO:0070646,GO:0070647,GO:0070887,GO:0071310,GO:0071444,GO:0071704,GO:0080090,GO:0106118,GO:0106120,GO:0140096,GO:1901564,GO:1902930,GO:1902932,GO:2000241,GO:2000243
EggNOG free text desc.protein deneddylation
EggNOG OGsCOG1310@1,KOG1554@2759
Ec32 ortholog descriptionCOP9 signalosome complex subunit 5a
Ec32 orthologEc-02_001400.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Exons9
Model size1098
Cds size1098
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815545.7666605-CDS-M-pyrifera_M_contig104:10634..107101622815545.7666605-CDS-M-pyrifera_M_contig104:10634..10710Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 10635..10710 -
1692277457.5180938-CDS-M-pyrifera_M_contig104:10634..107101692277457.5180938-CDS-M-pyrifera_M_contig104:10634..10710Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 10635..10710 -
1622815545.7765884-CDS-M-pyrifera_M_contig104:10971..111411622815545.7765884-CDS-M-pyrifera_M_contig104:10971..11141Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 10972..11141 -
1692277457.5305905-CDS-M-pyrifera_M_contig104:10971..111411692277457.5305905-CDS-M-pyrifera_M_contig104:10971..11141Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 10972..11141 -
1622815545.7860692-CDS-M-pyrifera_M_contig104:12563..126841622815545.7860692-CDS-M-pyrifera_M_contig104:12563..12684Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 12564..12684 -
1692277457.5399487-CDS-M-pyrifera_M_contig104:12563..126841692277457.5399487-CDS-M-pyrifera_M_contig104:12563..12684Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 12564..12684 -
1622815545.7978482-CDS-M-pyrifera_M_contig104:13855..140131622815545.7978482-CDS-M-pyrifera_M_contig104:13855..14013Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 13856..14013 -
1692277457.5490422-CDS-M-pyrifera_M_contig104:13855..140131692277457.5490422-CDS-M-pyrifera_M_contig104:13855..14013Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 13856..14013 -
1622815545.8099756-CDS-M-pyrifera_M_contig104:15079..152321622815545.8099756-CDS-M-pyrifera_M_contig104:15079..15232Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 15080..15232 -
1692277457.558561-CDS-M-pyrifera_M_contig104:15079..152321692277457.558561-CDS-M-pyrifera_M_contig104:15079..15232Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 15080..15232 -
1622815545.8214395-CDS-M-pyrifera_M_contig104:15714..158131622815545.8214395-CDS-M-pyrifera_M_contig104:15714..15813Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 15715..15813 -
1692277457.5690396-CDS-M-pyrifera_M_contig104:15714..158131692277457.5690396-CDS-M-pyrifera_M_contig104:15714..15813Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 15715..15813 -
1622815545.8432698-CDS-M-pyrifera_M_contig104:16763..168861622815545.8432698-CDS-M-pyrifera_M_contig104:16763..16886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 16764..16886 -
1692277457.5794492-CDS-M-pyrifera_M_contig104:16763..168861692277457.5794492-CDS-M-pyrifera_M_contig104:16763..16886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 16764..16886 -
1622815545.8549695-CDS-M-pyrifera_M_contig104:19495..195471622815545.8549695-CDS-M-pyrifera_M_contig104:19495..19547Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 19496..19547 -
1692277457.5929058-CDS-M-pyrifera_M_contig104:19495..195471692277457.5929058-CDS-M-pyrifera_M_contig104:19495..19547Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 19496..19547 -
1622815545.8651245-CDS-M-pyrifera_M_contig104:22194..223401622815545.8651245-CDS-M-pyrifera_M_contig104:22194..22340Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 22195..22340 -
1692277457.603705-CDS-M-pyrifera_M_contig104:22194..223401692277457.603705-CDS-M-pyrifera_M_contig104:22194..22340Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig104 22195..22340 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig104.850.1prot_M-pyrifera_M_contig104.850.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig104 10635..22340 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig104.850.1

>prot_M-pyrifera_M_contig104.850.1 ID=prot_M-pyrifera_M_contig104.850.1|Name=mRNA_M-pyrifera_M_contig104.850.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=366bp
MADAAYGGGAAAAPSMDSSVPCKDSRDTLYSFDEAKLDLIRKTKPWTQDP
KYFKKVKISPSAAMKMLMHANSGVEKGMAQGGKPVEIMGMMLGRPDTETT
NALIVTDVFPLPVEGAETKVLADDQEVANYMIDLGDLLETTRKERFMGWY
HSHPFDVEVHSHCFLSSTDISTQLSWQRAEDPHGNPWLAIVVDPLRSLAK
SRPEFGAFRVYPPEFSAPLNETPDGKIVTDDTQRVELWGSCWNRYYSMEI
EYFMSSLASDVMGILTENFLWMRTLGSTPILENENRERFSERIGNVADKV
EHCDLHMTHGAGGNVSGYLMADTSSNKPREESALSKTTHGSSELAIEHCQ
GQMTQITKSIVFGLK*
back to top

mRNA from alignment at M-pyrifera_M_contig104:10635..22340-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig104.850.1 ID=mRNA_M-pyrifera_M_contig104.850.1|Name=mRNA_M-pyrifera_M_contig104.850.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=11706bp|location=Sequence derived from alignment at M-pyrifera_M_contig104:10635..22340- (Macrocystis pyrifera P11B4 male)
ATGGCGGATGCAGCGTATGGAGGCGGGGCAGCAGCCGCTCCGTCCATGGA TTCATCGGTGCCTTGCAAGGACTCCCGTGATACCCTGTATAGTTTCGATG AAGCCAAGCTGGATCTCATCCGCAAGACCAAACCCTGGACGCAAGAGTGA GTGACATCTTTGTGTGTTACACTGGGTCCAAGACATTCTCTCGATCTTTC TGTCGCCGAACCCTGTGTGCTGCACCTCTGCTGCTCACTACCACTGCTGC AGTCCCCAGCCCGCTGAGAGATTGCCCTGAAGAACTGCGACACGAAGCAC TGTTGCCGTGCATATTTGATATCTGGTGTAGAACATGGAGTCGCTTGCTT ATTGCTGTGGTTGCTGCGTCAATTGCCGCAATTCGGTACAAGTACAGAAT CATACCCTGGACAACAGACAACAGCAGTGACCACTGCAATAGCAATACGC AACGTAGAATAAGGCGCAATGGACGTGCCTAGATTGCCGTCGATACAGCA GTAGTGTGTACCGATGTACTACTTTCCTCAGTCCGTTGTTGCCGGTAATG GATATCGATTGGCCTACTCCCCCATACATTGTCGTCGGTAGTAGCTATCG ATGGATCACAGCCCCAATCCTCTGTCACCAGTAGGGACTATCGACTGGGT GTTGCACAATCTATTGTGGCAGGCGATGTCTATTGATGGATCACATCCCC AATATATTGTCACCGACAATGGCCATCCATAGATGCTCCCCACAAGCTAC AGGTATTGTGGGAGCGATGTGCATCGATGGATGACACACAGCCCCAATCT GTTGCCAGGGACAATGGCCATCGATGGATACTCCCCACAATCTTTTGTGG CAAGCAATGTCGATTGTTACCGTCCTCAAATATATTGTTACAGACAACGT CCATCGGTGGGCACGGCTCACCACCTACCGTAGTCGGGCAATGTGTATCG ATCGACGCACGTACAACATATTCTGCTGAGCACAGCAAGGTATCTATTGT CTGACAACAGCAATATAAAACATAACATATTGCGACGATAGCAGTAAAAA TAATGAATGCATGGTTTATCTTTTGACACACGACAATGGGTGTATGGCAC GGTATATAGTGACCACTTGTTCTCACCTAGGCCAGCCAATGAAACAGCAA GCATGGGCGCTTCGATAAATATATATAAATGATAGGATCTCAAGCTTTTA TGGAAACGTGGTTTTCGATCCTGGGAAACAGACAATGGCCGCTGCAGGAA ATAATAGGGATATAATATGGAATGTGGCAATGTGGTGCAATGGACGCGCA TGTATGATGCTGTCGGCAATCGATGTCTTTCCATAGTTTGTTGCCTTCCC CAATCTGTTGTGAATGACAATGGCCATCGATGGACAGACTTCTCAATCCA TTACGGATGGCAACGGTCAGCGATGGACACGCTGCACAACCTATCGTCGT TGGCAATATGTATATCGATAGATTTCCCCCCCTGTCTGCTGTAACTGCCA ACATCTATCGATAGTTTTCCCCCTCGTCTATGGTCGCTGGCAATATGTAT CGACAGATTTTCCCCTCGCCTATTGACGCTGGCAATATCTATCGTTACAT TTTCCCCTCGCCCATTGCCGCTGGTACTATATATCGATAGATTTTCCCCT CGTCTATTCTCGCTGCCAACGAATATATATAGATTTTACTCTCGCCTATT GTCGCCGGCAATATCTGTCCCATAGATTTTGCTCTTGTCTATTGTCACTG GCAATATCTATCGATGGATTTTCCCCTCGTCTATTGTCGCTGACAATAGA CCATTGCGTGTCTATTGTCTAGGGTGTGGTCACAGATGGCCCAGGTTGGA TTTCTTATTTGAAAAGGGGGCGTTCTGCACTAACTTCAGTACAACGCCTC CCGAGTTTCTGATTTGGTTTCTTACATTTTCCTGCGAATTCAGCCTGCCT TTCTTAGTGCTTGTGTTCCTTCTTGAGTGTTACCAGGTATACGTACAAGT ATCTACTTGCTCGTATTAATACTAATATTAATACTAATACTAATATTAAT AGTTGTAGTTGTGCTTGTGCTGTATGATACGATTAAAAGGTAAGACCACG AGCTTCTCTTCGCACGGGGCGCGAGTACATGTATTTATATACAATGTATG ATGCGAGTACTTCTTATATTATTTTATAGTACCAGGTGCATGTTTAGGCA CGAGTGCTTCCGTTGGAGACAATAGACGCCTGGTGGTTATTGTCGATGAT GGATGATGGGCGCACTTCGATGCAACGAGGAGGCATGCTGCTGTTACTCC CATCGTTTTTGTCATTTCATTGCCCTTCAGTAGCCGCTCCTTCCCTTTAC CTGCAACTTCACCTATTAACAGTCACTTTATGCTTGGGCTTGACAGAGCA GTGGGGTGCATACCTGGCCTTTTCTGCTGTGCTGCAAGGTTTGTGTTGCG CTTACCTCCTCGCGTCGCGTTTGCGTGTTCGTACGCTCGAACCCGTAGTC CTACTGGTTGCGGTTGAAGTGGACACTTGAGATTGCTTGAGCTTCGTGAC GTAAAGCTACATACTCACATAGTCCAAATGCAAAATACCTGGTACTACTG TAAATACCAGGTAAAAAATACTGGGTACCTGGTACCAAAAACCTGATACC CTGGTACATCTCGAATGCATACCCAATATCAAGGGCTTCCTACCGTATGC GTGTTGGGAGTAGGTTGTTCTTGCTAAATCGTGCTAATGCATGTTCATGC CCGTCCCCCGCCATGCCATATCTATGCCTGCCGCCTTTCCCAGCCCCAAG TACTTCAAAAAGGTCAAGATTTCGCCGTCAGCAGCCATGAAGATGGTAAG TCAGATACCAATCCATGATTGACACTTCACGCGCCGGTACATCCCGGAAC ACAATGCCTTTCTCCCTCTAACACTCCCTCTAACTACGAGTTCAAGAAGT AGTGAGTACGTACACGTTGACCTTTTCTGTCCCATACCCCCTCTAGAGGA GACGCCAATCGGGGAGGGGAGTTCAAAATAGATCGGAAATAAAGTTGAAG CGAGATGCAACGGTGTCGCATGGCAATGTAAATTGCATGGACACGGAAAA TGGAACATGGGAAAATGGGGAGGAGGCGTTCTAGGCGTGCAGCTCCGGCG GCACTCTTGTTTTTGGCAGCTCTGATACGATTATACTATTAATAGCATCA AGGGTGTGTTCAGCAGGGTTTATATGTGTATACCCTTTGGCACCCGAGTA TCAAACCTGGTTGTTTTGGCCATATTCGAGTAGGTACCCGAGTACCCCCT GAGTATGCACTGAAGTACAGTTATTCGATACAACCCTACTCAACGCGCCC TCGTAGGAATTTGTACGTGGTGCTGTAACGTGCCGATGCTGGTACCCACC CTCGCAACGGCTCCCACGAAACCGAAACGATCGTGGAACGGTTATCCAGC TGGCGGTGTCCCTCTTTGTCTAGAGTTGATTGTTATGCTGCGGCATCCGC CCACGAGCAACGTTTGGCACTCTTGCGTGGGAACATGGTGATCAGGACCC ATCTTATTCACCAAAACCTATATATTACAGTATTTTGACCAATCACATTT AGTTCTGGTAACTACAGTATGTTCTACCGTAAGAGCGCTACAGTGTCCTC GATCATCAGCGGCATCCTCCTCTCGCAGGAAGCAGCGGTGTTTGTTCGAT ACGCAACCCCTACGTTTTCCCTTTCCTGGTACATACGTCACTATTTACTA GGCGTGTCTTTGCAGTAGAGCCCCATGCGCCCCTATTTTTGAGGAGAGCT CACCTGTTATTCGACACTATATGTGTGGTTGACGCACACTGTGTACTGTA ATAGACGAAGATGACCCCCATGCTGTACATTGATTTATTGGATTGGGTTA GGGCAAGCTATCTTCGTACCGTACACAAGTGACTCTCAACCATAGTTTCG AGTAACTGAGTAAAGGTAGTAACGTACCCTCACTATTTTTCTCAATCGTC GGCTACTATTAATAACTATTAAATATTTTCACTACCGGCAAAATTATCCT ACATTAATTCCAAGTATTTTCCACCCAAAAACGTCGGTGCGGTTCTAAAC GGGTTAATTATCAGGCAATTTTCCCTCATTTGTCCAGAATGGGCACTACA CCGGTAGCCTGCCCTGCAGTGTCAAGCCCGTTGCCCCGAGATCGCCCTTG TGAGAATTGCTTCGACTCCGTGAATCACCCCCCTCGGTAGAATCGAGAAA CCAATCAGCCTTGCCTACGTAGACCAAAATGGCAACATTTTTTTACAATC TCTAGTCTTCTTACCCAGTAGACTCACCACACCACGGCTATGACTGCGCT GGCACCCAAGCGTCCTCCGGTGTCCGGGTTTCCGGTTATTGTAATCTCTA GATGTTTTACCGGAACATAAAAAAATGTTGCTAGTTTAACACGCTGAGCT TCGGCTGGCTCGTGCCCACCACAGATCGGGTGTGACCCAAGAGAGCTTCA TGACAGCAGCTTGTGATTCTCTTCAGATTAGCTGTCTCGAGGTTCTCAAC AGGGGCCGACACCTCGACTGAGAGGTGCTGCAGTGGTCGAAATTGGTCAA AAATTGGGGTGCACAAAAGGAGACCAAAAAACAACCCCCAACTGAACGTT TACGTTTCACTTACGGACAGCTACAGCTTCTCACAGGAAACTACAACCCG CGAAATTGAGGGATGCTCCTGATGGGTGTGTGAGGGCGTCGGATGCGCCA GACGGCAGTCGTAGGCAGCCAGAAACGACTCGCGGGGTGTTTTGGTGTAC TCTCAGAGAAGGTTCGAGCCAGTAGCACGAAAAAAAACTCCCAAAATCGC CAAAATGTTCGTTTTCATGCAAGGGAGCATAGTACAATGGCTACATCGCC GATGAAGAAATGGCCTTCACTAAAATATTGCTGCTCTCTGTACGGATGAT AAATCTCTTCTTGGGTCGTCGCCGAAGATGCTGCGGAAAGAAAAACTACG TTCCCATGATAAATAGGAAGTTATTGGGCCCAACGAAGGGCATAAAAGGG CTCAAAAGGGCTAAAAAACTCTGGATTCTTGTTTATTTTCATCCATTATT CCGAAACTTCGAAATACGGATCTTGGTGGCAAATCCCCTACCCTATTTCC AAGTTGAGTGTATATGCTGCCGAATACTTGACGACGCATTCCCAAGTTAG CCAGCGTCCCCTTAAAGCGGACTTGCAGCGCGACCTACCGTTTTGTTGAA AGCATGTATTACCGTCCTCTGCAACGACCATGTTTTGCGGCCTTATGAAA TAATGAAGGGTGATACCTATTTAAGGCCTCCTCTTGAGAACTCCATGTCG GGTACGCCTACGCCTGAGCACAACGGGTTCGGCGGTCGAGGCGCCCCTGT TCTCATTCCCATTGTTACCTTGCTGGTGGTGGATGCTCTTGCGCTTGTCC GCAGCTGATGCACGCCAATTCCGGGGTGGAGAAGGGCATGGCTCAAGGGG GAAAGCCAGTGGAGATCATGGGCATGATGCTGGGGAGACCAGACACTGAA ACGACCAACGCCCTCATCGTCACCGACGTGAGCATGTTTTTTTTTTATTG TTTGCGATAATTTCAACGCTTTTGGAGCGCCCAGATAGAATCATTACCAG TACATATGAAGCAAACAAGTGCAGGCGTCTACTGTAGTGGGGCGACAGCA GCAAGACTACTGCTAGCACCATGCCGCTTGGGGCCCATGTATAGCAAAAG CGACCACACCAACATCAGGTAAGGTCTTATCAGCTTATCAACCGTCTGGT GGAATCGCGCAGCAGTACGACTAGTAATTCGTATCATGCCGCGCGCTTGT CCGAGATCTCCTGGAAATGTCGCTCGGGTGTATCAGGTATCGCCTACATC CCCTACCACAGCAGACACCCAGGCTACCTGGCGTGATTGATGCTGCAATT GTCACCTTTTTTCTACACTATTTTGTCCTTTAAGGCTCCCCTTCAAGTCT CGAAGGGGGTTAGTAGAAGCCAATTTTGAGCCAGGGGTAAGATTAACGCC TCCACAACCGGACGTATATTTTGGGGACAAACGTGCTTGCAATGAGAACT GATTGCAGTGGTAGATGACTTTGCTTCAGATTATTTTCTAGGTTGTTCCC GAGGGTGATGGTGTTGTTCGCGGACGAGATGTATCGAGCCCGCTCCTCTC TGGCACAGGTGGTGCTACAAGTTGTGGCATTTTTTGCATGCTGTACATAC CGTACAGTATGCCCAATCGGCAACTTGCGGTGTGTTCATGTGCGGGCGGG TGGCGGACTGAAAAACCCTTTCAGACAGTCCACTTAACGTCGGCCTCTGC TGTTACGATTTATTTCAGAATATACATGGGGCACACAGCTTGGTTGCTGG TATCGACATGGTGGCGCCCCTAAGCTCTCTAGCGTTTGCAAGGAGGACAG TTGTTCGTTCAACCATGAGTGCTGCGATTCTATTTATGGTTGAGTTGTTG CTTTGCTTTGCTGGCGTCGGCGTTCAGGTTTTCCCGCTGCCGGTGGAAGG GGCGGAGACCAAAGTACTGGCGGACGACCAAGAGGTGGCCAACTACATGA TCGACCTCGGGGATTTGCTCGAAACGGTGAGAGGCTCTTTTTTGGCTCGA TTCGCCCTGAAGCAAACGCGCTGCATCAAAACACCACCATGCGGCCTGTT CCTTTGTCCGTTCGCGATGGCCGAGACAGTACGCGTTCTGCTCGCCCGAA CACGTTAATAATCTATGCAGTAGGTGTATACGCAACACGCCAAATAGAAG CATACGCGTTCCATCTTGTTGCGAAAATTGACAATCTCGGGCGACCTGAT GGGTGCTGCTCTAGCGAGTGGCTCAAACGCGTGACACACCCGACAATGGT TGATGCGTATTGATGGGTTAGGTTTCCGCGTACATAGTGGTGTGTAGGAT ATACATGACCTGTGTGTATGTCCTAACTTACTGACCTACAACATCTAGAT GAGGCAGATCATGGTCTGTCCGGCCGGCCGGCGGAATGTTTCGTGTACAT CCGATAGTAACCCAAAACCTGTACGCACAACCTACCGTATCGTGTTGTGC CGCGGCAGACACGAAAGGAGCGATTCATGGGGTGGTACCACAGTCACCCG TTCGACGTGGAGGTGCACAGCCACTGCTTCCTCTCGTCCACGGATATCTC GACGCAGCTCTCGTGGCAGCGAGCAGAAGACCCTCATGGCAACCCCTGGC TAGCGATCGTGGTGCGTTTTTAACCCCAATCAACGTTCGTTGAAGCTAGG TACCTCTATGCAACGGTCTACTAATAGCAGCCTATTGTATCAATGGTCTA CAGCAGAGTCTATGGAAAGCGTAATGCCCGGAGTCGCTGGAGGATCACCC CTTGGGAGTATCATCTACAGTGGGATCGCCAGAGCATCATCACCGCCGCT CGCAGGAGTATCATCGCGTGGAGCCGCCAGGACATCACCGTCTGAACATT CATGTACCTCCATGCAGTATTTCTGTGGTGGCCTATTTTACGGAGGTGCC TATCTTCAACAGATGTATCTCTCGTTCTTTTCGTACGCTACCGCTCATGC TGGCCGCGTGTGTGAACGCGAAGTGGGTGCACTCAGAGCCGATCACCCCT ATTTGCACGCCGGGTCAGCAAACATATCCGTGTACGCCAATATTATTCCA ATATACCATTTTGTTTTGGCGGGGGGGGGGTGAGATATATCTCTAACCGG CCCCTATCCACAACCCTATGCCGACTCCCCCCCCCACGCTACAATCAACA TGGAGGCATTCATCAGAGTGTGCACCGTTATTTTTGCACACCGGGTTTGC AATTTGGTGTCACCCCCAGAGGCCAGTGTTGCTGTCCGAACGTATATGTA GTATACGAATAGCAGGGGGAAAACGTGGGTTCTCCCTCTGCGATTCGTGC ATTGATCAGATCGTAGGTTATCCCTTTTTTCGAGCCCACCATCACAGCAT CGCCGACTTTTAGTGTCGTGTAGGGTAAGGTAAGATAGGATAGGATAGGA TAGGGCAAGGAAGGGAAGGGCAGGGTGGGGTAGAGTACGATAGTGTGTGG AAGGATAGGGGGCAGAATAGGGTAGGGTAGGGCAGAATGAGGTGGGGTGG GGCAGCGTACGGTAGCGTAGGGAAGGGTAGGGTAGGGTAGGGTAGGGTAC TGTATGGTGCTACCAAACACACCAAGCCACGCTTGCAGCTATCCTGAAGC TCATCTGTAACACCCCTTTGGCCCCTCCCTTGAATGAACTCCCTCTCCGT CCGCTCCCCCCCCAATTTACCTTAAAGGTGGACCCCTTGCGGTCTCTAGC CAAGTCTCGGCCGGAGTTTGGCGCGTTTCGGGTGTACCCGCCGGAGTTCA GCGCCCCCCTGAATGAGACGCCCGACGGAAAGATCGTAACCGACGACACC CAGAGGGTGGAACTGTGGGGATCGTGCTGGAATCGGTGAGGCCGCGTGAG AAACGCCTTTTAGATTATTATAGACACATCCTACGATAGGAGTGCACCGA ATGTCTCTTCTGAGGCTTGTCACATTAGGAGCGCTGTGCCTCACCCTAAC CCTCACCCTAAACACGTTTTTTTTTGTCAAACTGACCCTTGCAACGGTAG GGGTTGCCGAGACATTTGTCACTGACGGAACTCCTCAACCATTGCAACTC CCAATCTAGACTCGTACCCAATACCCGTTGGATCTGATGGATATTGTTCT CGTTATTCCGTCAGATGCCTAACCTTGGACCTATTGGTCGGCAGTTTTCG GGCCTAGGTAGCTTGCATGTAAGGTTTCTCGAAACTCGGTTGCTGGAGCT TCTCGAGCGAGGAGCCTCAGAAAATTTGGCGTAGATACAGTTTTGTATCT GCTACCCCGTTCGCAGCACGGATCAACCGTTGTACTCTACTGGTACTCTA TACGTTCGAATGGTCCCATCGGCTATACAGGTATTTAACAAATGATGCAC TGGTACGTATGTAAAACGCTACCTGGATTGCACATATTTTGGTTAGGTCT TCCGCTGAAGAGCCTCGTGAGTCAGGAATGTGTGCGCTTAACCCCCCCCC CCCCCGACGGCCAGTCTTGAACTACGTAGCATGTAGGTTGTAGAAAAGAA AAGAGGGAATCTCGTGTGGCCCCCCCATTTGGTTCCAGTATGACGCGAAT GTTGTTTTTCAGAAAATCTACCCTATACCCTGTAGTCTTGACGCTGTGCC CCAACCCCAACCCTATCTGTATCCATAGGAACGCTCCCGCGGGAAAACCC CCCGACAGAATGAACGTTATTCAACAAAGGGCGGCTACATACGTAGCTCG CATACAAAAAAAAATGTATTTCTAAACTTGTCCTATTATTGAGTATATGT GCCTGCTAGGGGAGGGCAGCCATGAGGGAATATCGCCTGGCGAGATTGGT TCGCATTTCGGGGGGGGGGGTGGGGCACAAGAACACGCTCTCTTTTTTTT CGTTGAATTTGCCCCACCCACTACAACCGGCCGATCGGGGCAACTTCCCG CCCTATGTATGGATTGTTTTCCTTGTTTTGGATTGTTGGTGCTTTCGTTG GTGAGCTGGTTTTGGCCTTTGGGCCTCATGCTGCTACATGATGTGTTAAT CTGCAGGTACTACTCCATGGAGATCGAATATTTCATGAGCTCGCTGGCGT CTGACGTCATGGGCATCCTCACCGAGAACTTCTTGTGGATGCGCACCCTC GGCTCGACTCCTATTCTGGAGAACGAGGTAAACACATCCGCTGCTTCGAA AATCCAATGCAACGTTTGCGAGCATACGAATTCTGTCATCAACGACAACA GTGCCTTTGCCGCATAGATGCCGGCGCACCATTCAAGTAGACTGTGACCC TTGAGCCAGAGCCATTCAAGCCACACCAAAGCCCTTATACCTTGAAGCCC GATGTGCGTTTTGCGAGGTGTCCCCTTAAACCGAAGAGGGTGTGGTCAAG TTACTGTACTACTGTCGTGTTAGCCCTTGTGGCGCCCAGAGATGGCCACC AGTCAATTGTGAGTTTTGGTGTACTCCCGCCATCTATGAGTAGCGCAATT CGATGCGAGTCGACGAAGGAAGAAAGGGCTAGACTCTCCCGCGGTTATAA TGCACGGCACGCACCGTACGTAGTGGGTAGGGGAGAGAAAAGCCTTCTGC TTTGTGACCCCGGATCTGAGTTACGTCGAGGAAGGAGCAGGAGAAATAAG GGCGATGATAACTGGGATGGAAAAAGAGGGGGGGGGGGAAACAAGTGCGA GCACGCAGTGCAGCAATGCGAGTACCTTTGTAACTCACGTCTGATAATAT ACAGTAGCACACTCCCTGAAACGAATTTCGAAGCTGATTATCCCGACAAC GAGGAAGGTGCATACACCGAGCGAACGATGGAAATGCGTTCATGGAATGG CCCCGTCGAGATATTTCCAAAGCCGAGCATTTTGGTTGTGTATGCCCCCC TTGCTTTGGAGAGGAATGATCCCGTCGAGATATTTCCAAAGCCAAGCATT TTGGTTGTGTATGCCTCCCTTGCTTTCGAGAAAATGGGCTCGGAAGTTCG TCCCTGGGGTGCGTTATCCTATCACCCGTGTGATATTGTTATCACCCACG TGAAAGTGTCATACCGGTAGGACCAGGTCGCGCTCGTGTCGTACGCACGA CTCCATCCGTTGTAGTTCGGAGACCATTTTTTTGTTCACATCCCAACGGA GCAGTGACCGACCGCTGTTGCTGTATTCTTCGTTGTATGTCGTCATTGTC TTCTCCGTGTAGTCTGCAAAGGCTTCGTTTCTAAGCAACGCCGGCTTCGA GAACGACACATTGATAATATTTGATGTCCACAAATGCACGTTTTCCATCC CTACCATTAGCACCAACCGCAGATAGATCATGGTGTACGGCTGTCGTATT CAGTGGAAGCACGCGCCGGTTTAGCGAAAACGATCTCGATGTCCACAAGC ACACGTTTTCTATGTTGACGTACATTAACTACAGGATGTATTTACTAGCT GCTGCTGTTTATTTGTTTTTTTTATTCTTTAAAGGGCTCCAGATGACGTG TTACACCTACGAGTATCATGTTTGTTTTTTTGTTGGTGTCTGATGTCTTT CAACTAACCCTGCACGAGCTTGTGATTTTCGGTGCGCTTCTTGCTCTAGA ACCGGGAACGCTTTTCCGAGCGTATCGGAAATGTGGCGGACAAGGTCGAG CACTGCGACCTTCACATGACACACGGGGCGGGAGGGAATGTGAGCGGCTA CCTCATGGCGGACACTTCCAGCAACAAACCAAGGGAGGAGTCCGCGCTTT CCAAGACAACCCACGGCAGGTGACCCTACAAAAATAAAGCTTGTGATAGT TCCCTTCCTTTGCTGACCGTGTCTGGCTCGTTGTCAGTATGTATCATGGA ATGACCTCGTGGTGGTCGTGTTCGTCTCGTGTCTTGCTCCCCCCATGCTG TTGTCGCATCCATGTACTACTGTACTGTACGTAACGGGTTTTTTTACCGC AACACTCACCCCCCACCGACCGATTGCGCGCGGCACGCGATTTGTTTCTA CGACGACGACATGGGCGGCTTCTCCTCCAGCTCCGAACTGGCGATCGAGC ACTGTCAGGGCCAGATGACTCAGATCACCAAGAGCATCGTCTTCGGCCTG AAGTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig104:10635..22340-

>mRNA_M-pyrifera_M_contig104.850.1 ID=mRNA_M-pyrifera_M_contig104.850.1|Name=mRNA_M-pyrifera_M_contig104.850.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2196bp|location=Sequence derived from alignment at M-pyrifera_M_contig104:10635..22340- (Macrocystis pyrifera P11B4 male)
ATGGCGGATGCAGCGTATGGAGGCGGGGCAGCAGCCGCTCCGTCCATGGA
TTCATCGGTGCCTTGCAAGGACTCCCGTGATACCCTGTATAGTTTCGATG
AAGCCAAGCTGGATCTCATCCGCAAGACCAAACCCTGGACGCAAGAATGG
CGGATGCAGCGTATGGAGGCGGGGCAGCAGCCGCTCCGTCCATGGATTCA
TCGGTGCCTTGCAAGGACTCCCGTGATACCCTGTATAGTTTCGATGAAGC
CAAGCTGGATCTCATCCGCAAGACCAAACCCTGGACGCAAGACCCCAAGT
ACTTCAAAAAGGTCAAGATTTCGCCGTCAGCAGCCATGAAGATGCCCCAA
GTACTTCAAAAAGGTCAAGATTTCGCCGTCAGCAGCCATGAAGATGCTGA
TGCACGCCAATTCCGGGGTGGAGAAGGGCATGGCTCAAGGGGGAAAGCCA
GTGGAGATCATGGGCATGATGCTGGGGAGACCAGACACTGAAACGACCAA
CGCCCTCATCGTCACCGACCTGATGCACGCCAATTCCGGGGTGGAGAAGG
GCATGGCTCAAGGGGGAAAGCCAGTGGAGATCATGGGCATGATGCTGGGG
AGACCAGACACTGAAACGACCAACGCCCTCATCGTCACCGACGTTTTCCC
GCTGCCGGTGGAAGGGGCGGAGACCAAAGTACTGGCGGACGACCAAGAGG
TGGCCAACTACATGATCGACCTCGGGGATTTGCTCGAAACGGTTTTCCCG
CTGCCGGTGGAAGGGGCGGAGACCAAAGTACTGGCGGACGACCAAGAGGT
GGCCAACTACATGATCGACCTCGGGGATTTGCTCGAAACGACACGAAAGG
AGCGATTCATGGGGTGGTACCACAGTCACCCGTTCGACGTGGAGGTGCAC
AGCCACTGCTTCCTCTCGTCCACGGATATCTCGACGCAGCTCTCGTGGCA
GCGAGCAGAAGACCCTCATGGCAACCCCTGGCTAGCGATCGTGACACGAA
AGGAGCGATTCATGGGGTGGTACCACAGTCACCCGTTCGACGTGGAGGTG
CACAGCCACTGCTTCCTCTCGTCCACGGATATCTCGACGCAGCTCTCGTG
GCAGCGAGCAGAAGACCCTCATGGCAACCCCTGGCTAGCGATCGTGGTGG
ACCCCTTGCGGTCTCTAGCCAAGTCTCGGCCGGAGTTTGGCGCGTTTCGG
GTGTACCCGCCGGAGTTCAGCGCCCCCCTGAATGAGACGCCCGACGGAAA
GATCGTAACCGACGACACCCAGAGGGTGGAACTGTGGGGATCGTGCTGGA
ATCGGTGGACCCCTTGCGGTCTCTAGCCAAGTCTCGGCCGGAGTTTGGCG
CGTTTCGGGTGTACCCGCCGGAGTTCAGCGCCCCCCTGAATGAGACGCCC
GACGGAAAGATCGTAACCGACGACACCCAGAGGGTGGAACTGTGGGGATC
GTGCTGGAATCGGTACTACTCCATGGAGATCGAATATTTCATGAGCTCGC
TGGCGTCTGACGTCATGGGCATCCTCACCGAGAACTTCTTGTGGATGCGC
ACCCTCGGCTCGACTCCTATTCTGGAGAACGAGGTACTACTCCATGGAGA
TCGAATATTTCATGAGCTCGCTGGCGTCTGACGTCATGGGCATCCTCACC
GAGAACTTCTTGTGGATGCGCACCCTCGGCTCGACTCCTATTCTGGAGAA
CGAGAACCGGGAACGCTTTTCCGAGCGTATCGGAAATGTGGCGGACAAGG
TCGAGCACTGCGACCTTCACATGACACACGGGGCGGGAGGGAATGTGAGC
GGCTACCTCATGGCGGACACTTCCAGCAACAAACCAAGGGAGGAGTCCGC
GCTTTCCAAGACAACCCACGGCAGAACCGGGAACGCTTTTCCGAGCGTAT
CGGAAATGTGGCGGACAAGGTCGAGCACTGCGACCTTCACATGACACACG
GGGCGGGAGGGAATGTGAGCGGCTACCTCATGGCGGACACTTCCAGCAAC
AAACCAAGGGAGGAGTCCGCGCTTTCCAAGACAACCCACGGCAGCTCCGA
ACTGGCGATCGAGCACTGTCAGGGCCAGATGACTCAGATCACCAAGAGCA
TCGTCTTCGGCCTGAAGTAGCTCCGAACTGGCGATCGAGCACTGTCAGGG
CCAGATGACTCAGATCACCAAGAGCATCGTCTTCGGCCTGAAGTAG
back to top