mRNA_M-pyrifera_M_contig103727.795.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103727.795.1
Unique NamemRNA_M-pyrifera_M_contig103727.795.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103727.795.1 vs. uniprot
Match: A0A368FNF9_ANCCA (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Ancylostoma caninum TaxID=29170 RepID=A0A368FNF9_ANCCA)

HSP 1 Score: 96.7 bits (239), Expect = 3.000e-20
Identity = 62/164 (37.80%), Postives = 92/164 (56.10%), Query Frame = 1
Query:   19 GCALLAASYLPASNLLFPVGFVVAERVMYLPSVAVAWAAGALWERCARRAGRLGARMPLLLLLLVTAAGVCTAGGVTMWRDRAWSHELLLWSRSLAACPVNAKVLNNYGKALQRAGMVDGALAHFARAAAVEESFAPAYFNVALLVQQRGLHKHAIAAYRESLR 510
            G  L A S+LPASNLL  VGF +AERV+YLPSV +   AGA++ +  R    +      +L++ +T         +T  R   W  EL L++  L  CP NAK+  N GK L R G VD A  ++  A  +  +FA A+ N+ + +  +G ++ ++ AYR+SLR
Sbjct:  182 GVVLGAMSFLPASNLLVTVGFTIAERVLYLPSVGLCVMAGAMFVQALRYYQNMDKIGTAVLVIAMT---------MTYQRSEEWRSELDLYASGLKVCPQNAKIHYNLGKVLSRIGDVDAAEHNYWNA--IRPTFAVAWMNLGITLMNQGKYEESLQAYRQSLR 334          
BLAST of mRNA_M-pyrifera_M_contig103727.795.1 vs. uniprot
Match: A0A834IKM5_RHYFE (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Rhynchophorus ferrugineus TaxID=354439 RepID=A0A834IKM5_RHYFE)

HSP 1 Score: 89.0 bits (219), Expect = 1.910e-17
Identity = 59/164 (35.98%), Postives = 83/164 (50.61%), Query Frame = 1
Query:    4 VLYVTGCALLAASYLPASNLLFPVGFVVAERVMYLPSVAVAWAAGALWERCARRAGRLGARMPLLLLLLVTAAGVCTAGGVTMWRDRAWSHELLLWSRSLAACPVNAKVLNNYGKALQRAGMVDGALAHFARAAAVEESFAPAYFNVALLVQQRGLHKHAIAAY 495
            V+ + G +LL   ++PASNL FPVGFVVAERV+Y+PS+      G  W+  + + GR      + LL+L       + G  T  R+  W +E  ++   L     NAK+ NN G AL+  G  D AL  F  A +V+     AY NV        ++K A  AY
Sbjct:  291 VILIMGTSLLVLPFIPASNLFFPVGFVVAERVLYMPSMGFCMLIGYGWQILSEKTGRKFGWTCVSLLIL-------SHGTKTYLRNWDWENEYTIFMSGLRVNQRNAKLFNNVGHALESQGKFDEALQFFKTAVSVQHDDVGAYINVGRTYNHLKMYKEAEDAY 447          
BLAST of mRNA_M-pyrifera_M_contig103727.795.1 vs. uniprot
Match: U4UDB0_DENPD (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=U4UDB0_DENPD)

HSP 1 Score: 88.6 bits (218), Expect = 2.580e-17
Identity = 60/165 (36.36%), Postives = 84/165 (50.91%), Query Frame = 1
Query:    1 RVLYVTGCALLAASYLPASNLLFPVGFVVAERVMYLPSVAVAWAAGALWERCARRAGRLGARMPLLLLLLVTAAGVCTAGGVTMWRDRAWSHELLLWSRSLAACPVNAKVLNNYGKALQRAGMVDGALAHFARAAAVEESFAPAYFNVALLVQQRGLHKHAIAAY 495
            RV+ +   +LL   ++PASNL FPVGFVVAERV+Y+PS+      G  W+  +RR G+  A   + LL++       + G  T  R+  W +E  ++   L     NAK+ NN G AL+  G  D AL  F  A  V+     AY NV        ++K A  AY
Sbjct:  239 RVVLIMSTSLLVLPFIPASNLFFPVGFVVAERVLYMPSMGFCMLIGYGWQITSRRTGKKIAWTFVGLLVI-------SHGWKTYLRNWDWENEYTIFMSGLRVNQRNAKLFNNVGHALESQGHFDEALKFFKTAVKVQHDDVGAYINVGRTYNHLKMYKEAEEAY 396          
BLAST of mRNA_M-pyrifera_M_contig103727.795.1 vs. uniprot
Match: A0A1I8IK87_9PLAT (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8IK87_9PLAT)

HSP 1 Score: 86.7 bits (213), Expect = 1.120e-16
Identity = 60/163 (36.81%), Postives = 87/163 (53.37%), Query Frame = 1
Query:   19 GCALLAASYLPASNLLFPVGFVVAERVMYLPSVAVAWAAGALWERCARRAGRLGARMPLLLLLLVTAAGVCTAGGVTMWRDRAWSHELLLWSRSLAACPVNAKVLNNYGKALQRAGMVDGALAHFARAAAVEESFAPAYFNVALLVQQRGLHKHAIAAYRESL 507
            G A+LA  +LPASNL FPVGFV+AERV+YLPS+      G  ++R   R      R+ LLL L+  +       G T+ R+  W  E  L++ ++   P NAK+ NN G +L++      AL  F +AA+V+     A+ NVA      G    A   YR+++
Sbjct:  385 GLAMLALPFLPASNLFFPVGFVIAERVLYLPSMGFCLLVGLGYDRLRHRLPESVCRLGLLLTLIAFS-------GKTLCRNCDWKDEYSLFTSAVRVNPNNAKLWNNVGHSLEKIEKFSEALPFFLKAASVQPDDIGAHQNVARTYATLGDKVMAEKFYRQAV 540          
BLAST of mRNA_M-pyrifera_M_contig103727.795.1 vs. uniprot
Match: A0A267H182_9PLAT (Dolichyl-phosphate-mannose--protein mannosyltransferase n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267H182_9PLAT)

HSP 1 Score: 86.7 bits (213), Expect = 1.220e-16
Identity = 60/163 (36.81%), Postives = 87/163 (53.37%), Query Frame = 1
Query:   19 GCALLAASYLPASNLLFPVGFVVAERVMYLPSVAVAWAAGALWERCARRAGRLGARMPLLLLLLVTAAGVCTAGGVTMWRDRAWSHELLLWSRSLAACPVNAKVLNNYGKALQRAGMVDGALAHFARAAAVEESFAPAYFNVALLVQQRGLHKHAIAAYRESL 507
            G A+LA  +LPASNL FPVGFV+AERV+YLPS+      G  ++R   R      R+ LLL L+  +       G T+ R+  W  E  L++ ++   P NAK+ NN G +L++      AL  F +AA+V+     A+ NVA      G    A   YR+++
Sbjct:  363 GLAMLALPFLPASNLFFPVGFVIAERVLYLPSMGFCLLVGLGYDRLRHRLPESVCRLGLLLTLIAFS-------GKTLCRNCDWKDEYSLFTSAVRVNPNNAKLWNNVGHSLEKIEKFSEALPFFLKAASVQPDDIGAHQNVARTYATLGDKVMAEKFYRQAV 518          
BLAST of mRNA_M-pyrifera_M_contig103727.795.1 vs. uniprot
Match: A0A182I5P5_ANOAR (Uncharacterized protein n=4 Tax=Cellia TaxID=44534 RepID=A0A182I5P5_ANOAR)

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-16
Identity = 58/154 (37.66%), Postives = 82/154 (53.25%), Query Frame = 1
Query:   13 VTGCALLAASYLPASNLLFPVGFVVAERVMYLPS----VAVAWAAGALWERCARRAGRLGARMPLLLLLLVTAAGVCTAGGVTMWRDRAWSHELLLWSRSLAACPVNAKVLNNYGKALQRAGMVDGALAHFARAAAVEESFAPAYFNVALLVQQ 462
            V G  LL   +LPA+NL+  VGFVVAERV+Y+PS    + V + A  LWER   R      R P LLL +V  A  C     T+ R++ WS    L    L   P NAK+  N+G  L+ +   + A+AH+  A  +  ++A A+ N+  L+ Q
Sbjct:    8 VLGFLLLLLPFLPATNLVVTVGFVVAERVLYIPSMGCLILVVYGAQRLWERLDARL-----RRPFLLLTIVLLAAGCLK---TIARNQDWSSREALLRSGLKTLPHNAKMHYNFGNFLRDSSRPEPAIAHYREALRLWPTYASAHNNIGTLMPQ 153          
BLAST of mRNA_M-pyrifera_M_contig103727.795.1 vs. uniprot
Match: A0A8C4QZV6_EPTBU (Dolichyl-phosphate-mannose--protein mannosyltransferase n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QZV6_EPTBU)

HSP 1 Score: 85.5 bits (210), Expect = 2.590e-16
Identity = 63/163 (38.65%), Postives = 84/163 (51.53%), Query Frame = 1
Query:   13 VTGCALLAASYLPASNLLFPVGFVVAERVMYLPSVAVAWAAGALWERCA-RRAGRLGARMPLLLLLLVTAAGVCTAGGVTMWRDRAWSHELLLWSRSLAACPVNAKVLNNYGKALQRAGMVDGALAHFARAAAVEESFAPAYFNVALLVQQRGLHKHAIAAYR 498
            ++  AL    +LPASNL FPVGFVVAERV+YLPS+    A G  W+R A RR+ +L      L +    A  + T G  T+ R   W  E  L++ +L     NAK+ NN G AL+       AL +F +A  V+     A+ NV    +     K A AAYR
Sbjct:  183 MSALALTVFPFLPASNLFFPVGFVVAERVLYLPSMGFCLATGLGWQRLASRRSVQL-----YLFMSFGFAFLLATHGMKTLMRSHDWRTEYSLFTSALKVNKHNAKLWNNVGHALENQKAFGEALRYFVQATRVQPDDVGAHMNVGRTYKTLNQTKEAEAAYR 340          
BLAST of mRNA_M-pyrifera_M_contig103727.795.1 vs. uniprot
Match: A0A7E5X2G0_TRINI (Dolichyl-phosphate-mannose--protein mannosyltransferase n=7 Tax=Obtectomera TaxID=104431 RepID=A0A7E5X2G0_TRINI)

HSP 1 Score: 85.5 bits (210), Expect = 3.070e-16
Identity = 59/159 (37.11%), Postives = 80/159 (50.31%), Query Frame = 1
Query:   19 GCALLAASYLPASNLLFPVGFVVAERVMYLPSVAVAWAAGALWERCARRAGRLGARMPLLLLLLVTAAGVCTAGGVTMWRDRAWSHELLLWSRSLAACPVNAKVLNNYGKALQRAGMVDGALAHFARAAAVEESFAPAYFNVALLVQQRGLHKHAIAAY 495
            G ALL   +LPASNL FPVGFVVAERV+Y+PS+         W   A++  +L A + + LLL  +A         T  R+  W  E  +++  L     NAK+ NN G AL+  G    AL  F  A +V+     A+ NV       GL++ A  AY
Sbjct:  389 GLALLVLPFLPASNLFFPVGFVVAERVLYMPSMGWCLLVAHGWRLLAKKRAKLAASLLIFLLLAFSAK--------TYMRNWDWKTEYSIFASGLKVNRNNAKLYNNVGHALEADGKYAEALEFFNTAVSVQPDDVGAHINVGRTYNHLGLYQEAEDAY 539          
BLAST of mRNA_M-pyrifera_M_contig103727.795.1 vs. uniprot
Match: UPI001F4FDD1F (protein O-mannosyl-transferase Tmtc3 n=1 Tax=Schistocerca americana TaxID=7009 RepID=UPI001F4FDD1F)

HSP 1 Score: 85.5 bits (210), Expect = 3.090e-16
Identity = 59/157 (37.58%), Postives = 80/157 (50.96%), Query Frame = 1
Query:   25 ALLAASYLPASNLLFPVGFVVAERVMYLPSVAVAWAAGALWERCARRAGRLGARMPLLLLLLVTAAGVCTAGGVTMWRDRAWSHELLLWSRSLAACPVNAKVLNNYGKALQRAGMVDGALAHFARAAAVEESFAPAYFNVALLVQQRGLHKHAIAAY 495
            A L   +LPASNL FPVGFVVAER++Y+PS+ +    G  W   A +  +  A + L LLLLV +         T  R+  W  E  ++   L     NAK+ NN G AL+  G  D AL +F +A +V+E    A+ NV        + K A  AY
Sbjct:  354 AFLILPFLPASNLFFPVGFVVAERILYIPSMGLCMLVGYGWSLLADKRSKKIAYISLGLLLLVHSCK-------TYIRNLDWESEYTIFMAGLRVNQRNAKLFNNVGHALEGQGRFDEALQYFQKAVSVQEDDIGAHINVGRTYNHLKMFKEAEDAY 503          
BLAST of mRNA_M-pyrifera_M_contig103727.795.1 vs. uniprot
Match: A0A182ME02_9DIPT (Uncharacterized protein n=1 Tax=Anopheles culicifacies TaxID=139723 RepID=A0A182ME02_9DIPT)

HSP 1 Score: 85.1 bits (209), Expect = 3.520e-16
Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 1
Query:   13 VTGCALLAASYLPASNLLFPVGFVVAERVMYLPS----VAVAWAAGALWERCARRAGRLGARMPLLLLLLVTAAGVCTAGGVTMWRDRAWSHELLLWSRSLAACPVNAKVLNNYGKALQRAGMVDGALAHFARAAAVEESFAPAYFNVALLVQQ 462
            V G  LL   +LPA+NL+  VGFVVAERV+Y+PS    + V + A  LWER    +GRL  R P+LLL +V  A  C     T+ R++ WS    L    L   P NAK+  N+G  L+ +   + A+AH+  A  +  ++A A+ N+  L+ Q
Sbjct:   22 VLGFLLLVLPFLPATNLVVTVGFVVAERVLYIPSMGCLILVVYGAQRLWER----SGRL--RRPILLLTVVLLASGCLK---TIARNQDWSSREALLRSGLKTLPHNAKMHYNFGNFLRDSSQPEPAIAHYREALRLWPTYASAHNNIGTLMPQ 166          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103727.795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A368FNF9_ANCCA3.000e-2037.80Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
A0A834IKM5_RHYFE1.910e-1735.98Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
U4UDB0_DENPD2.580e-1736.36Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
A0A1I8IK87_9PLAT1.120e-1636.81Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
A0A267H182_9PLAT1.220e-1636.81Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
A0A182I5P5_ANOAR1.500e-1637.66Uncharacterized protein n=4 Tax=Cellia TaxID=44534... [more]
A0A8C4QZV6_EPTBU2.590e-1638.65Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
A0A7E5X2G0_TRINI3.070e-1637.11Dolichyl-phosphate-mannose--protein mannosyltransf... [more]
UPI001F4FDD1F3.090e-1637.58protein O-mannosyl-transferase Tmtc3 n=1 Tax=Schis... [more]
A0A182ME02_9DIPT3.520e-1638.96Uncharacterized protein n=1 Tax=Anopheles culicifa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103727contigM-pyrifera_M_contig103727:78..587 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score85.5
Seed ortholog evalue2.6e-14
Seed eggNOG ortholog7029.ACYPI005722-PA
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Domain of unknown function (DUF1736)
EggNOG OGs38CY4@33154,3BAFG@33208,3CV6Z@33213,3E8F3@33342,3SG5T@50557,41W55@6656,COG0457@1,KOG1124@2759
COG Functional cat.S
Best tax levelParaneoptera
Best eggNOG OGNA|NA|NA
Exons1
Model size510
Cds size510
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815543.3615975-CDS-M-pyrifera_M_contig103727:77..5871622815543.3615975-CDS-M-pyrifera_M_contig103727:77..587Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103727 78..587 -
1692277456.626063-CDS-M-pyrifera_M_contig103727:77..5871692277456.626063-CDS-M-pyrifera_M_contig103727:77..587Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103727 78..587 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103727.795.1prot_M-pyrifera_M_contig103727.795.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103727 78..587 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103727.795.1

>prot_M-pyrifera_M_contig103727.795.1 ID=prot_M-pyrifera_M_contig103727.795.1|Name=mRNA_M-pyrifera_M_contig103727.795.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp
RVLYVTGCALLAASYLPASNLLFPVGFVVAERVMYLPSVAVAWAAGALWE
RCARRAGRLGARMPLLLLLLVTAAGVCTAGGVTMWRDRAWSHELLLWSRS
LAACPVNAKVLNNYGKALQRAGMVDGALAHFARAAAVEESFAPAYFNVAL
LVQQRGLHKHAIAAYRESLR
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mRNA from alignment at M-pyrifera_M_contig103727:78..587-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103727.795.1 ID=mRNA_M-pyrifera_M_contig103727.795.1|Name=mRNA_M-pyrifera_M_contig103727.795.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig103727:78..587- (Macrocystis pyrifera P11B4 male)
CGGGTGCTGTACGTCACTGGCTGCGCGCTGCTGGCAGCTTCGTATCTGCC CGCAAGCAACCTGCTGTTCCCCGTTGGTTTCGTGGTGGCTGAGCGGGTGA TGTACTTGCCCTCGGTTGCAGTGGCGTGGGCAGCGGGTGCTCTGTGGGAG CGCTGCGCCAGACGCGCTGGTCGACTGGGCGCCCGCATGCCGCTGCTGCT GCTGCTGCTGGTCACTGCGGCCGGCGTGTGCACAGCAGGGGGGGTGACAA TGTGGAGAGACCGTGCATGGTCGCATGAGCTGTTGCTCTGGTCGCGCTCG CTGGCTGCCTGTCCAGTCAACGCCAAGGTGTTGAACAACTACGGCAAGGC TCTACAACGAGCTGGCATGGTGGATGGCGCGCTGGCGCACTTTGCACGCG CTGCGGCGGTGGAAGAGTCGTTTGCACCTGCCTACTTCAACGTGGCGCTG CTCGTGCAGCAGCGAGGCTTGCACAAGCATGCCATTGCAGCCTACCGCGA GAGTTTACGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig103727:78..587-

>mRNA_M-pyrifera_M_contig103727.795.1 ID=mRNA_M-pyrifera_M_contig103727.795.1|Name=mRNA_M-pyrifera_M_contig103727.795.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1020bp|location=Sequence derived from alignment at M-pyrifera_M_contig103727:78..587- (Macrocystis pyrifera P11B4 male)
CGGGTGCTGTACGTCACTGGCTGCGCGCTGCTGGCAGCTTCGTATCTGCC
CGCAAGCAACCTGCTGTTCCCCGTTGGTTTCGTGGTGGCTGAGCGGGTGA
TGTACTTGCCCTCGGTTGCAGTGGCGTGGGCAGCGGGTGCTCTGTGGGAG
CGCTGCGCCAGACGCGCTGGTCGACTGGGCGCCCGCATGCCGCTGCTGCT
GCTGCTGCTGGTCACTGCGGCCGGCGTGTGCACAGCAGGGGGGGTGACAA
TGTGGAGAGACCGTGCATGGTCGCATGAGCTGTTGCTCTGGTCGCGCTCG
CTGGCTGCCTGTCCAGTCAACGCCAAGGTGTTGAACAACTACGGCAAGGC
TCTACAACGAGCTGGCATGGTGGATGGCGCGCTGGCGCACTTTGCACGCG
CTGCGGCGGTGGAAGAGTCGTTTGCACCTGCCTACTTCAACGTGGCGCTG
CTCGTGCAGCAGCGAGGCTTGCACAAGCATGCCATTGCAGCCTACCGCGA
GAGTTTACGGCGGGTGCTGTACGTCACTGGCTGCGCGCTGCTGGCAGCTT
CGTATCTGCCCGCAAGCAACCTGCTGTTCCCCGTTGGTTTCGTGGTGGCT
GAGCGGGTGATGTACTTGCCCTCGGTTGCAGTGGCGTGGGCAGCGGGTGC
TCTGTGGGAGCGCTGCGCCAGACGCGCTGGTCGACTGGGCGCCCGCATGC
CGCTGCTGCTGCTGCTGCTGGTCACTGCGGCCGGCGTGTGCACAGCAGGG
GGGGTGACAATGTGGAGAGACCGTGCATGGTCGCATGAGCTGTTGCTCTG
GTCGCGCTCGCTGGCTGCCTGTCCAGTCAACGCCAAGGTGTTGAACAACT
ACGGCAAGGCTCTACAACGAGCTGGCATGGTGGATGGCGCGCTGGCGCAC
TTTGCACGCGCTGCGGCGGTGGAAGAGTCGTTTGCACCTGCCTACTTCAA
CGTGGCGCTGCTCGTGCAGCAGCGAGGCTTGCACAAGCATGCCATTGCAG
CCTACCGCGAGAGTTTACGG
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