mRNA_M-pyrifera_M_contig103416.727.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103416.727.1 vs. uniprot
Match: A0A7C5E8U0_9CHLR (ROK family protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C5E8U0_9CHLR) HSP 1 Score: 344 bits (883), Expect = 6.630e-115 Identity = 168/214 (78.50%), Postives = 187/214 (87.38%), Query Frame = 1 Query: 4 CSPEDVPDGRDATQPLGRHLDGCRIGFDLGASDRKVSAVIDGEAVYSEEVVWEPRKQTDPDYHYREIRKALETAASKLPRLDAIGGSSAGVLINNRVMVASLFRGIPADRYDDVRSIFTRIREEMGVPLEIVNDGEVTALAGSMSLEDNPVLGIALGSSEAGGYVTPEGNITGWLNELAFAPIAYHANAPVDEWSGDRGTGALYLSQQCPFRLA 645 C+ DVP R+ Q LGRHLDGCRIGFDLGASD KVSAV++GEAV+SEE+VWEPR QTDP YHY I AL+ AA+K+PR+DAIGGSSAGV INNR MVASLFRGIPA+R+D+VR++F RIR+EMGVPLEIVNDGEVTALAGSMSLEDN VLGIALGSSEA GYVTP+GNITGWLNELAFAP+ Y APVDEWSGD+G GALY SQQC FRLA Sbjct: 133 CAAADVPAERENEQALGRHLDGCRIGFDLGASDLKVSAVVEGEAVFSEEIVWEPRHQTDPRYHYEHIMNALKMAAAKMPRVDAIGGSSAGVYINNRAMVASLFRGIPAERFDEVRNMFLRIRQEMGVPLEIVNDGEVTALAGSMSLEDNAVLGIALGSSEAAGYVTPQGNITGWLNELAFAPVDYSPTAPVDEWSGDKGCGALYFSQQCVFRLA 346
BLAST of mRNA_M-pyrifera_M_contig103416.727.1 vs. uniprot
Match: A0A7V3DF41_9BACT (ROK family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V3DF41_9BACT) HSP 1 Score: 343 bits (881), Expect = 1.420e-114 Identity = 162/214 (75.70%), Postives = 189/214 (88.32%), Query Frame = 1 Query: 4 CSPEDVPDGRDATQPLGRHLDGCRIGFDLGASDRKVSAVIDGEAVYSEEVVWEPRKQTDPDYHYREIRKALETAASKLPRLDAIGGSSAGVLINNRVMVASLFRGIPADRYDDVRSIFTRIREEMGVPLEIVNDGEVTALAGSMSLEDNPVLGIALGSSEAGGYVTPEGNITGWLNELAFAPIAYHANAPVDEWSGDRGTGALYLSQQCPFRLA 645 C+P + P ++ TQPLGRHLDGCRIGFDLGASDRKVSAV++GEA+YSEEVVWEPRK +DP YHY EI AL+TA+SK+PR+DAIGGSSAGV INNR M+ASLFRGIP DR+ ++R++F R+R+E+GVPLE+VNDGEVTALAGSMSLEDN VLG+ALGSSEAGGYVT +GNITGWLNELAF P+ Y +AP DEWSGD+G GALY SQQC FRLA Sbjct: 135 CTPAEAPREKETTQPLGRHLDGCRIGFDLGASDRKVSAVVNGEAIYSEEVVWEPRKHSDPAYHYGEIMTALKTASSKMPRVDAIGGSSAGVYINNRPMIASLFRGIPKDRFGEIRNMFLRMRDELGVPLEVVNDGEVTALAGSMSLEDNGVLGVALGSSEAGGYVTMDGNITGWLNELAFCPVDYSPDAPADEWSGDKGVGALYFSQQCVFRLA 348
BLAST of mRNA_M-pyrifera_M_contig103416.727.1 vs. uniprot
Match: A0A831UKD8_9BACT (ROK family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831UKD8_9BACT) HSP 1 Score: 342 bits (878), Expect = 4.150e-114 Identity = 162/213 (76.06%), Postives = 187/213 (87.79%), Query Frame = 1 Query: 4 CSPEDVPDGRDATQPLGRHLDGCRIGFDLGASDRKVSAVIDGEAVYSEEVVWEPRKQTDPDYHYREIRKALETAASKLPRLDAIGGSSAGVLINNRVMVASLFRGIPADRYDDVRSIFTRIREEMGVPLEIVNDGEVTALAGSMSLEDNPVLGIALGSSEAGGYVTPEGNITGWLNELAFAPIAYHANAPVDEWSGDRGTGALYLSQQCPFRL 642 C+ EDVP +++T+PLGRHLDGCR+GFDLGASDRKVSAV+DGEA++SEEVVWEPRK +DP YHY E+ KA++TAASK+PR+DAIGGS+AGV I+NR M+ASLFRG+P +R+D+V +F RI EMGVPLEIVNDGEVTALAGSMSLEDN VLGIALGSSEAGGYVT +GNITGWLNELAF P+ Y APVDEWS DRG GALY SQQC FRL Sbjct: 136 CAAEDVPTQKESTRPLGRHLDGCRVGFDLGASDRKVSAVVDGEAIFSEEVVWEPRKHSDPTYHYNEVMKAIKTAASKMPRVDAIGGSAAGVYISNRAMIASLFRGVPKERFDEVHDLFMRIGNEMGVPLEIVNDGEVTALAGSMSLEDNGVLGIALGSSEAGGYVTLDGNITGWLNELAFCPVDYSPEAPVDEWSRDRGVGALYFSQQCVFRL 348
BLAST of mRNA_M-pyrifera_M_contig103416.727.1 vs. uniprot
Match: A0A7V7ECC7_9BACT (ROK family protein n=2 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V7ECC7_9BACT) HSP 1 Score: 339 bits (869), Expect = 9.260e-113 Identity = 161/214 (75.23%), Postives = 183/214 (85.51%), Query Frame = 1 Query: 4 CSPEDVPDGRDATQPLGRHLDGCRIGFDLGASDRKVSAVIDGEAVYSEEVVWEPRKQTDPDYHYREIRKALETAASKLPRLDAIGGSSAGVLINNRVMVASLFRGIPADRYDDVRSIFTRIREEMGVPLEIVNDGEVTALAGSMSLEDNPVLGIALGSSEAGGYVTPEGNITGWLNELAFAPIAYHANAPVDEWSGDRGTGALYLSQQCPFRLA 645 C+ +DVP RDA Q LGRHLDGCRIGFDLGASDRKVSAV+DGE V+SEEVVW PR+ DP+YHY EI A+ AASK+PRLDA+GGS+AGV +NN+V +ASLFRG+P RYDDVR IF RI++E+GVPL +VNDGEVTALAGSMSLEDN VLGIA+GSSEAGGYVT +G ITGWLNELAFAP+ Y+ AP DEWSGDRG GALY SQQC FRLA Sbjct: 135 CNADDVPPERDAAQALGRHLDGCRIGFDLGASDRKVSAVVDGEVVFSEEVVWAPRQSADPEYHYNEIMAAIRKAASKMPRLDAVGGSAAGVYVNNQVRIASLFRGVPKQRYDDVRGIFLRIKDELGVPLVVVNDGEVTALAGSMSLEDNGVLGIAMGSSEAGGYVTMDGTITGWLNELAFAPVDYNPEAPADEWSGDRGVGALYFSQQCVFRLA 348
BLAST of mRNA_M-pyrifera_M_contig103416.727.1 vs. uniprot
Match: A0A847G985_9BACT (ROK family protein n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847G985_9BACT) HSP 1 Score: 338 bits (868), Expect = 1.350e-112 Identity = 162/215 (75.35%), Postives = 186/215 (86.51%), Query Frame = 1 Query: 1 SCSPEDVPDGRDATQPLGRHLDGCRIGFDLGASDRKVSAVIDGEAVYSEEVVWEPRKQTDPDYHYREIRKALETAASKLPRLDAIGGSSAGVLINNRVMVASLFRGIPADRYDDVRSIFTRIREEMGVPLEIVNDGEVTALAGSMSLEDNPVLGIALGSSEAGGYVTPEGNITGWLNELAFAPIAYHANAPVDEWSGDRGTGALYLSQQCPFRLA 645 SC PE+VP D T+PLGRHLDGCRIGFDLG SDRKVSAV++GEAVYSEEVVW+P Q+DP+YHY E+ +AL AA+KLPR+DAIGGSSAGV +NNR M+ASLFR IP +R+ +VR +F RIREEMGVPLEIVNDGEVTALAGSMSLEDN VLGIA+G+SEAGGYVT +GNITGWLNELAF P+ Y+ +APV+EWSGD G GA Y SQQC FRLA Sbjct: 134 SCRPEEVPAENDVTKPLGRHLDGCRIGFDLGGSDRKVSAVVEGEAVYSEEVVWDPVNQSDPNYHYSEVMRALNAAAAKLPRVDAIGGSSAGVYVNNRAMIASLFRSIPRERFGEVREMFLRIREEMGVPLEIVNDGEVTALAGSMSLEDNGVLGIAMGTSEAGGYVTMDGNITGWLNELAFCPVDYNPDAPVEEWSGDVGVGARYFSQQCVFRLA 348
BLAST of mRNA_M-pyrifera_M_contig103416.727.1 vs. uniprot
Match: A0A2U2S6C8_9CHLR (Transcriptional regulator n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2U2S6C8_9CHLR) HSP 1 Score: 338 bits (867), Expect = 1.860e-112 Identity = 160/215 (74.42%), Postives = 188/215 (87.44%), Query Frame = 1 Query: 1 SCSPEDVPDGRDATQPLGRHLDGCRIGFDLGASDRKVSAVIDGEAVYSEEVVWEPRKQTDPDYHYREIRKALETAASKLPRLDAIGGSSAGVLINNRVMVASLFRGIPADRYDDVRSIFTRIREEMGVPLEIVNDGEVTALAGSMSLEDNPVLGIALGSSEAGGYVTPEGNITGWLNELAFAPIAYHANAPVDEWSGDRGTGALYLSQQCPFRLA 645 SC+PE+VP +++ +PLGRHLDG RIGFDLGASD KVSAV++GEA++S E+VWEPRKQ+DP+YHYR I AL+ AASK+PR+DAIGGS+AGV +NNRV +ASLFRG+P +RY +VR +F RIR+E+GVPLEIVNDGEVTALAGSMSLEDN VLGIALGSS+AGGYVTP+GNIT WLNELAF P+ Y APVDEWSGDRG GA Y SQQC FRLA Sbjct: 134 SCAPEEVPPEKESERPLGRHLDGYRIGFDLGASDLKVSAVVNGEAIFSHEIVWEPRKQSDPEYHYRHIMDALKLAASKMPRVDAIGGSAAGVYVNNRVRIASLFRGVPRERYHEVRDLFLRIRQELGVPLEIVNDGEVTALAGSMSLEDNAVLGIALGSSQAGGYVTPQGNITDWLNELAFVPVDYSPTAPVDEWSGDRGCGAQYFSQQCVFRLA 348
BLAST of mRNA_M-pyrifera_M_contig103416.727.1 vs. uniprot
Match: A0A7Y5CCI2_9BACT (ROK family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5CCI2_9BACT) HSP 1 Score: 337 bits (864), Expect = 5.120e-112 Identity = 164/215 (76.28%), Postives = 187/215 (86.98%), Query Frame = 1 Query: 1 SCSPEDVPDGRDATQPLGRHLDGCRIGFDLGASDRKVSAVIDGEAVYSEEVVWEPRKQTDPDYHYREIRKALETAASKLPRLDAIGGSSAGVLINNRVMVASLFRGIPADRYDDVRSIFTRIREEMGVPLEIVNDGEVTALAGSMSLEDNPVLGIALGSSEAGGYVTPEGNITGWLNELAFAPIAYHANAPVDEWSGDRGTGALYLSQQCPFRLA 645 +CS ++VP ++ T+PLGRHLDG RIGFDLGASDRKVSAV++GEA+YSEEVVWEPRK DP YHY EI AL++AASKLPR+DAIGGSSAGV+IN+R M+ASLFR +P DR+ +V IF RIR+E GVP+E+VNDGEVTALAGSMSLEDN VLGIALGSSEAGGYVT +GNITGWLNELAFAPI Y+ AP DEWSGDRG GALY SQQC FRLA Sbjct: 134 TCSADEVPAEKETTRPLGRHLDGYRIGFDLGASDRKVSAVVNGEAIYSEEVVWEPRKHGDPSYHYNEILAALKSAASKLPRVDAIGGSSAGVIINSRPMIASLFRSVPKDRFGEVHDIFLRIRKEFGVPVEVVNDGEVTALAGSMSLEDNGVLGIALGSSEAGGYVTMDGNITGWLNELAFAPIDYNPAAPADEWSGDRGVGALYFSQQCVFRLA 348
BLAST of mRNA_M-pyrifera_M_contig103416.727.1 vs. uniprot
Match: A0A1F8T5H2_9CHLR (Transcriptional regulator n=1 Tax=Chloroflexi bacterium RBG_19FT_COMBO_62_14 TaxID=1797671 RepID=A0A1F8T5H2_9CHLR) HSP 1 Score: 337 bits (863), Expect = 7.490e-112 Identity = 160/214 (74.77%), Postives = 185/214 (86.45%), Query Frame = 1 Query: 4 CSPEDVPDGRDATQPLGRHLDGCRIGFDLGASDRKVSAVIDGEAVYSEEVVWEPRKQTDPDYHYREIRKALETAASKLPRLDAIGGSSAGVLINNRVMVASLFRGIPADRYDDVRSIFTRIREEMGVPLEIVNDGEVTALAGSMSLEDNPVLGIALGSSEAGGYVTPEGNITGWLNELAFAPIAYHANAPVDEWSGDRGTGALYLSQQCPFRLA 645 C VP +++ +PLGRHLDGCRIGFDLGASDRKVSAVI+GE VY+EEVVW+PR QTDPDYHYREI AL A+ KLPR+DAIGGS+AG+ I+NRV +ASLFRG+P +RY +VR++F R+R+E+GVPLEIVNDG+VTALAGSMSLEDNPVLGIA+GSSEAGGYV +GNITGWLNELAFAP+ Y AP DEWSGDRG GALY SQQC FRLA Sbjct: 135 CPAAAVPPEKESPKPLGRHLDGCRIGFDLGASDRKVSAVIEGEVVYTEEVVWDPRAQTDPDYHYREIMTALRAASGKLPRVDAIGGSAAGIYIDNRVRIASLFRGVPNERYAEVRTLFLRMRDELGVPLEIVNDGDVTALAGSMSLEDNPVLGIAMGSSEAGGYVNRDGNITGWLNELAFAPVDYSKTAPADEWSGDRGVGALYFSQQCVFRLA 348
BLAST of mRNA_M-pyrifera_M_contig103416.727.1 vs. uniprot
Match: A0A1V5RD06_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium ADurb.Bin325 TaxID=1852859 RepID=A0A1V5RD06_9CHLR) HSP 1 Score: 336 bits (861), Expect = 1.700e-111 Identity = 159/215 (73.95%), Postives = 186/215 (86.51%), Query Frame = 1 Query: 1 SCSPEDVPDGRDATQPLGRHLDGCRIGFDLGASDRKVSAVIDGEAVYSEEVVWEPRKQTDPDYHYREIRKALETAASKLPRLDAIGGSSAGVLINNRVMVASLFRGIPADRYDDVRSIFTRIREEMGVPLEIVNDGEVTALAGSMSLEDNPVLGIALGSSEAGGYVTPEGNITGWLNELAFAPIAYHANAPVDEWSGDRGTGALYLSQQCPFRLA 645 +C+ EDVP G + + LGRHL+GCR+GFDLGASD KVSAVIDGEA++SEE+VWEPRKQ DP YHY +R A+ AASKLPR+DAIGGSSAGV+++NR MVASLFRG+PA+R+D VRS+F RIR+E GVP E+VNDGEVTALAGSMSLE+N VLGIA+GSS+A GYVTP+GNIT WLNELAFAP+ Y+ PVDEWSGDRG GALY SQQC FRLA Sbjct: 138 ACAAEDVPAGHEPERALGRHLEGCRVGFDLGASDLKVSAVIDGEAIFSEEIVWEPRKQDDPAYHYEHVRSAIRLAASKLPRVDAIGGSSAGVIVDNRPMVASLFRGVPAERFDAVRSLFLRIRDEFGVPFEVVNDGEVTALAGSMSLEENAVLGIAMGSSQAVGYVTPQGNITDWLNELAFAPVDYNPAGPVDEWSGDRGVGALYFSQQCVFRLA 352
BLAST of mRNA_M-pyrifera_M_contig103416.727.1 vs. uniprot
Match: A0A7C1GZ13_9BACT (ROK family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1GZ13_9BACT) HSP 1 Score: 333 bits (854), Expect = 1.670e-110 Identity = 160/215 (74.42%), Postives = 182/215 (84.65%), Query Frame = 1 Query: 1 SCSPEDVPDGRDATQPLGRHLDGCRIGFDLGASDRKVSAVIDGEAVYSEEVVWEPRKQTDPDYHYREIRKALETAASKLPRLDAIGGSSAGVLINNRVMVASLFRGIPADRYDDVRSIFTRIREEMGVPLEIVNDGEVTALAGSMSLEDNPVLGIALGSSEAGGYVTPEGNITGWLNELAFAPIAYHANAPVDEWSGDRGTGALYLSQQCPFRLA 645 SC+PEDVP +A+ PLGRHLDGCR+GFDLGASDRKVSAV+DGEAVYSEEVVWEP +DP YHY E+ A+ TAA+K+PRLDA+GGS+AGV +NNR MVASLFRG+P +R+D+V +F RI +EMGVPL IVNDGEVTALAGSMSLEDN VLGIALGSSEAGGYV EGNITGWLNELAF P+ Y+ A V+EWSGD G GA Y SQQC FRLA Sbjct: 134 SCAPEDVPPENEASMPLGRHLDGCRVGFDLGASDRKVSAVMDGEAVYSEEVVWEPAGNSDPAYHYNEVMTAIRTAAAKMPRLDAVGGSAAGVYVNNRAMVASLFRGVPKERFDEVHDLFIRIGKEMGVPLVIVNDGEVTALAGSMSLEDNGVLGIALGSSEAGGYVNMEGNITGWLNELAFCPVDYNPRATVEEWSGDYGVGASYFSQQCVFRLA 348 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103416.727.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103416.727.1 >prot_M-pyrifera_M_contig103416.727.1 ID=prot_M-pyrifera_M_contig103416.727.1|Name=mRNA_M-pyrifera_M_contig103416.727.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=215bp SCSPEDVPDGRDATQPLGRHLDGCRIGFDLGASDRKVSAVIDGEAVYSEEback to top mRNA from alignment at M-pyrifera_M_contig103416:5..649- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103416.727.1 ID=mRNA_M-pyrifera_M_contig103416.727.1|Name=mRNA_M-pyrifera_M_contig103416.727.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=645bp|location=Sequence derived from alignment at M-pyrifera_M_contig103416:5..649- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103416:5..649- >mRNA_M-pyrifera_M_contig103416.727.1 ID=mRNA_M-pyrifera_M_contig103416.727.1|Name=mRNA_M-pyrifera_M_contig103416.727.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1290bp|location=Sequence derived from alignment at M-pyrifera_M_contig103416:5..649- (Macrocystis pyrifera P11B4 male)back to top |