mRNA_M-pyrifera_M_contig103412.725.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103412.725.1 vs. uniprot
Match: A0A518IZ28_9BACT (Uncharacterized protein n=2 Tax=Rosistilla oblonga TaxID=2527990 RepID=A0A518IZ28_9BACT) HSP 1 Score: 184 bits (467), Expect = 4.830e-52 Identity = 87/119 (73.11%), Postives = 104/119 (87.39%), Query Frame = 1 Query: 13 FAADNTASAEEVLASFPAPGTQQAKIAVTVTAGCNNRVGVCPITVLVRAIGPSFGADRELTIELRPRFKLPTHNTFDFRQTIALRQSDSVYQETLTVPMYYPWSHCRVRVLEDGVVLPG 369
FA+ NTA A+E+LASFP PGT+ +KIA+TVTAG +NRVG+CP+TV+VRAIGPSFGA+R+LTIELRPR P+HNTFDFRQTI L++SDSVY+ET VP YY W HCRVRVLE GV+LPG
Sbjct: 34 FASPNTAPADELLASFPPPGTKGSKIAITVTAGESNRVGICPVTVVVRAIGPSFGAERKLTIELRPRLNPPSHNTFDFRQTITLQESDSVYEETFAVPAYYRWYHCRVRVLEAGVLLPG 152
BLAST of mRNA_M-pyrifera_M_contig103412.725.1 vs. uniprot
Match: A0A517M3B4_9BACT (Uncharacterized protein n=1 Tax=Rosistilla ulvae TaxID=1930277 RepID=A0A517M3B4_9BACT) HSP 1 Score: 164 bits (414), Expect = 1.230e-44 Identity = 79/111 (71.17%), Postives = 93/111 (83.78%), Query Frame = 1 Query: 37 AEEVLASFPAPGTQQAKIAVTVTAGCNNRVGVCPITVLVRAIGPSFGADRELTIELRPRFKLPTHNTFDFRQTIALRQSDSVYQETLTVPMYYPWSHCRVRVLEDGVVLPG 369
A+E+LA FP G + + IA+TVTAG RVGVCP+TV VRAIGPSFGADR+LTIELRPR LP+ NTFDFRQTI L +SDS+++E L VP+YYPW+ CRVRVLEDGVVLPG
Sbjct: 38 ADELLADFPVDGAKGSGIALTVTAGETKRVGVCPVTVEVRAIGPSFGADRKLTIELRPRSVLPSQNTFDFRQTIQLGESDSIHREVLEVPIYYPWAQCRVRVLEDGVVLPG 148
BLAST of mRNA_M-pyrifera_M_contig103412.725.1 vs. uniprot
Match: A0A518JW81_9BACT (Uncharacterized protein n=1 Tax=Rosistilla carotiformis TaxID=2528017 RepID=A0A518JW81_9BACT) HSP 1 Score: 152 bits (385), Expect = 1.250e-40 Identity = 74/115 (64.35%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 25 NTASAEEVLASFPAPGTQQAKIAVTVTAGCNNRVGVCPITVLVRAIGPSFGADRELTIELRPRFKLPTHNTFDFRQTIALRQSDSVYQETLTVPMYYPWSHCRVRVLEDGVVLPG 369
N A+E+LA FP G + + IA+TVTAG RVGVCP+TV VR+IGP+F ADR+LTIELRPR P NTFDFRQTI L +SDS+++ L VP+YYPW+ CRVRVLEDG VLPG
Sbjct: 34 NPLLADELLADFPIDGAKGSGIALTVTAGSAQRVGVCPVTVEVRSIGPTFAADRKLTIELRPRSAPPNQNTFDFRQTIDLAESDSIHRVVLEVPIYYPWTQCRVRVLEDGAVLPG 148 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103412.725.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 3 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103412.725.1 >prot_M-pyrifera_M_contig103412.725.1 ID=prot_M-pyrifera_M_contig103412.725.1|Name=mRNA_M-pyrifera_M_contig103412.725.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp MVVRFAADNTASAEEVLASFPAPGTQQAKIAVTVTAGCNNRVGVCPITVLback to top mRNA from alignment at M-pyrifera_M_contig103412:284..652+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103412.725.1 ID=mRNA_M-pyrifera_M_contig103412.725.1|Name=mRNA_M-pyrifera_M_contig103412.725.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=369bp|location=Sequence derived from alignment at M-pyrifera_M_contig103412:284..652+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103412:284..652+ >mRNA_M-pyrifera_M_contig103412.725.1 ID=mRNA_M-pyrifera_M_contig103412.725.1|Name=mRNA_M-pyrifera_M_contig103412.725.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig103412:284..652+ (Macrocystis pyrifera P11B4 male)back to top |