Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 1 |
| Model size | 665 |
| Cds size | 489 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815539.0466363-CDS-M-pyrifera_M_contig10340:2701..3190 | 1622815539.0466363-CDS-M-pyrifera_M_contig10340:2701..3190 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10340 2702..3190 + |
| 1692277454.939242-CDS-M-pyrifera_M_contig10340:2701..3190 | 1692277454.939242-CDS-M-pyrifera_M_contig10340:2701..3190 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig10340 2702..3190 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815539.1222103-UTR-M-pyrifera_M_contig10340:3190..3365 | 1622815539.1222103-UTR-M-pyrifera_M_contig10340:3190..3365 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10340 3191..3365 + |
| 1692277454.9535587-UTR-M-pyrifera_M_contig10340:3190..3365 | 1692277454.9535587-UTR-M-pyrifera_M_contig10340:3190..3365 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig10340 3191..3365 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10340.719.1 >prot_M-pyrifera_M_contig10340.719.1 ID=prot_M-pyrifera_M_contig10340.719.1|Name=mRNA_M-pyrifera_M_contig10340.719.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp
PERVFLKRKKSRVPNRRVPLCVSRTTTTTQLTPLKQSPLSWFTVRLQYIT
RKRSNEKCVLVTPAHLCLLWCRLREHARCAPRPHKKATLLFLFNGLAFIG
KGRQRSTATKKGPRGHDDTTALLACHAAPVLALSVPGAPLSCLKSLFRRK
STARGTNTSIAE* back to topmRNA from alignment at M-pyrifera_M_contig10340:2702..3365+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig10340.719.1 ID=mRNA_M-pyrifera_M_contig10340.719.1|Name=mRNA_M-pyrifera_M_contig10340.719.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=664bp|location=Sequence derived from alignment at M-pyrifera_M_contig10340:2702..3365+ (Macrocystis pyrifera P11B4 male)
CCCGAGAGAGTTTTCTTAAAACGAAAAAAAAGTCGTGTTCCGAACAGACG
TGTCCCGTTGTGTGTATCCCGGACGACGACGACGACTCAGTTAACCCCCC
TAAAACAATCTCCTCTTTCTTGGTTTACAGTGCGACTACAGTACATCACC
CGGAAGCGCTCAAATGAGAAATGCGTGCTGGTCACGCCCGCGCATCTATG
TCTGCTATGGTGCCGACTGCGGGAGCATGCGCGGTGCGCCCCTCGTCCTC
ACAAAAAAGCTACCCTTCTTTTCTTATTTAACGGACTCGCATTTATTGGC
AAAGGTCGACAAAGGTCGACAGCGACAAAGAAAGGACCGCGAGGACACGA
TGACACTACTGCCCTCCTTGCTTGCCACGCAGCCCCCGTTCTTGCACTTT
CCGTGCCTGGCGCCCCTCTCTCTTGCCTCAAAAGTCTTTTTCGTCGTAAA
TCTACCGCGCGAGGTACGAATACTAGTATAGCAGAGTAATCGCACCGCGT
ACTGACTTCCACTGCTCCGCGTTTTCGGAAATAATCTGAGCCACGGAGTT
ATCGAAAAGCCGTGCGCCCGCGGCCAACAAACCAGTCAACCACACAATCA
TCTCAGCCATACCAACCATACAAACAAACCACCTGCAAACCAATGCTCCA
GCTTTCAACATCCG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig10340:2702..3365+ >mRNA_M-pyrifera_M_contig10340.719.1 ID=mRNA_M-pyrifera_M_contig10340.719.1|Name=mRNA_M-pyrifera_M_contig10340.719.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig10340:2702..3365+ (Macrocystis pyrifera P11B4 male)
CCCGAGAGAGTTTTCTTAAAACGAAAAAAAAGTCGTGTTCCGAACAGACG
TGTCCCGTTGTGTGTATCCCGGACGACGACGACGACTCAGTTAACCCCCC
TAAAACAATCTCCTCTTTCTTGGTTTACAGTGCGACTACAGTACATCACC
CGGAAGCGCTCAAATGAGAAATGCGTGCTGGTCACGCCCGCGCATCTATG
TCTGCTATGGTGCCGACTGCGGGAGCATGCGCGGTGCGCCCCTCGTCCTC
ACAAAAAAGCTACCCTTCTTTTCTTATTTAACGGACTCGCATTTATTGGC
AAAGGTCGACAAAGGTCGACAGCGACAAAGAAAGGACCGCGAGGACACGA
TGACACTACTGCCCTCCTTGCTTGCCACGCAGCCCCCGTTCTTGCACTTT
CCGTGCCTGGCGCCCCTCTCTCTTGCCTCAAAAGTCTTTTTCGTCGTAAA
TCTACCGCGCGAGGTACGAATACTAGTATAGCAGAGTAACCCGAGAGAGT
TTTCTTAAAACGAAAAAAAAGTCGTGTTCCGAACAGACGTGTCCCGTTGT
GTGTATCCCGGACGACGACGACGACTCAGTTAACCCCCCTAAAACAATCT
CCTCTTTCTTGGTTTACAGTGCGACTACAGTACATCACCCGGAAGCGCTC
AAATGAGAAATGCGTGCTGGTCACGCCCGCGCATCTATGTCTGCTATGGT
GCCGACTGCGGGAGCATGCGCGGTGCGCCCCTCGTCCTCACAAAAAAGCT
ACCCTTCTTTTCTTATTTAACGGACTCGCATTTATTGGCAAAGGTCGACA
AAGGTCGACAGCGACAAAGAAAGGACCGCGAGGACACGATGACACTACTG
CCCTCCTTGCTTGCCACGCAGCCCCCGTTCTTGCACTTTCCGTGCCTGGC
GCCCCTCTCTCTTGCCTCAAAAGTCTTTTTCGTCGTAAATCTACCGCGCG
AGGTACGAATACTAGTATAGCAGAGTAA back to top
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