mRNA_M-pyrifera_M_contig103388.715.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103388.715.1
Unique NamemRNA_M-pyrifera_M_contig103388.715.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig103388.715.1 vs. uniprot
Match: A0A3R6XSD6_9STRA (Transcriptional adapter n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XSD6_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.170e-53
Identity = 104/217 (47.93%), Postives = 140/217 (64.52%), Query Frame = 1 
Query:    1 EEEELLVEALLLYGMGNWSDVGDHVGTKSAALCEKHYRTVYLAAPEGMPRRSAALLTGAALPPAPAVARSDAPPIPXXXXARSGPTLADLVASRYPKGVEVAGFMPLRGDFDVEHDNEAESLLADMEFGPEDHETEKQLKLKVVEIYNRRLDEREQRKRFAVDHGLLDFRRLQAAAKRKQRDEREVADSLRVFARFHSPEEHSELVDGLVEEKRIRK 651
            +EE LL++ + ++GMGNW D+ +HVG+K+   CE HY   YL  P  MP            P  P+  R+ A P        + PT  D    +   G  +AG+MPLRGDFDVEHDN+AE +LADMEF  +DH TE++LKLKV+ IYN +LDERE+RK+F V+H LLD+++ Q   +R+ +DERE+   LR FARFHS +EH  LV+GLV   R+RK
Sbjct:   72 DEELLLLDGIEMFGMGNWKDIAEHVGSKTDKKCETHYMVNYLKLP-AMPES----------PEKPSSGRAAATPA-------ATPTADD---DKEKMGSALAGYMPLRGDFDVEHDNDAEVILADMEFADDDHPTERELKLKVIAIYNAKLDERERRKKFVVEHQLLDYKKYQQNERRRPKDERELVMQLRPFARFHSKDEHDALVEGLVAAMRLRK 267
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BLAST of mRNA_M-pyrifera_M_contig103388.715.1 vs. uniprot
Match: K3X7P8_GLOUD (Transcriptional adapter n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7P8_GLOUD)

HSP 1 Score: 189 bits (480), Expect = 2.650e-53
Identity = 109/232 (46.98%), Postives = 148/232 (63.79%), Query Frame = 1 
Query:    1 EEEELLVEALLLYGMGNWSDVGDHVGTKSAALCEKHYRTVYLAAPEGMPR-------------RSAALLTGAALPPAPAVARSDAPPIPXXXXARSGPTLAD--LVASRYPKGVEVAGFMPLRGDFDVEHDNEAESLLADMEFGPEDHETEKQLKLKVVEIYNRRLDEREQRKRFAVDHGLLDFRRLQAAAKRKQRDEREVADSLRVFARFHSPEEHSELVDGLVEEKRIRK 651
            +EE LL+E + ++GMGNW D+ +HV TKS   CE HY   YL+  + MPR             +  A   GA+ P     A SDA          +  TLA   + A     G E+AG+MPLRGDFDVE+DNEAE +LADMEF  +DH TE++LKLKV+EIYN +LDERE+RKRF ++ GLLD++R Q + +R+ +DERE+   +R FARF +P+EH + V+GL+   R+RK
Sbjct:  182 DEELLLLEGIEMFGMGNWKDIAEHVSTKSEKKCETHYMGAYLSTSDLMPRFLDDPEAPNATREKKEAAANGASQP----TAASDA---------TAPTTLATGAVAALSTNPGSELAGYMPLRGDFDVEYDNEAELILADMEFSEDDHPTERELKLKVIEIYNAKLDERERRKRFVIERGLLDYKRHQQSERRRPKDERELIAQMRPFARFQTPKEHDDFVNGLITAMRLRK 400
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BLAST of mRNA_M-pyrifera_M_contig103388.715.1 vs. uniprot
Match: W4G8S8_9STRA (Transcriptional adapter n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G8S8_9STRA)

HSP 1 Score: 183 bits (465), Expect = 4.220e-52
Identity = 104/217 (47.93%), Postives = 140/217 (64.52%), Query Frame = 1 
Query:    1 EEEELLVEALLLYGMGNWSDVGDHVGTKSAALCEKHYRTVYLAAPEGMPRRSAALLTGAALPPAPAVARSDAPPIPXXXXARSGPTLADLVASRYPKGVEVAGFMPLRGDFDVEHDNEAESLLADMEFGPEDHETEKQLKLKVVEIYNRRLDEREQRKRFAVDHGLLDFRRLQAAAKRKQRDEREVADSLRVFARFHSPEEHSELVDGLVEEKRIRK 651
            +EE LL++ + ++GMGNW D+ +HVG+K+   CE HY   YL  P  MP            P  P+  R+ A P        + PT  D    +   G  +AG+MPLRGDFDVEHDN+AE +LADMEF  +DH TE++LKLKV+ IYN +LDERE+RK+F V+H LLD+++ Q   +R+ +DERE+   LR FARFHS +EH  LV+GLV   R+RK
Sbjct:   82 DEELLLLDGIEMFGMGNWKDIAEHVGSKTDKKCETHYMVNYLKLP-AMPES----------PEKPSSGRAAATPA-------ATPTADD---DKEKMGSALAGYMPLRGDFDVEHDNDAEVILADMEFADDDHPTERELKLKVIAIYNAKLDERERRKKFVVEHQLLDYKKYQQNERRRPKDERELVMQLRPFARFHSKDEHDALVEGLVAAMRLRK 277
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BLAST of mRNA_M-pyrifera_M_contig103388.715.1 vs. uniprot
Match: A0A662XDQ4_9STRA (Transcriptional adapter n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDQ4_9STRA)

HSP 1 Score: 184 bits (466), Expect = 9.120e-52
Identity = 107/234 (45.73%), Postives = 145/234 (61.97%), Query Frame = 1 
Query:    1 EEEELLVEALLLYGMGNWSDVGDHVGTKSAALCEKHYRTVYLAAPEGMPR------------RSAALLTGAALPPAPAVARSDAPPIPXXXXARSGPTLADLVASRYPKGV-----EVAGFMPLRGDFDVEHDNEAESLLADMEFGPEDHETEKQLKLKVVEIYNRRLDEREQRKRFAVDHGLLDFRRLQAAAKRKQRDEREVADSLRVFARFHSPEEHSELVDGLVEEKRIRK 651
            +EE LL+E + ++GMGNW D+ +HV TKS   CE HY T YL + + MPR             + A   G+A        +S A  +     A S   L D  A R P        ++AG+MPLRGDFDVE+DNEAE +LADMEF  EDH TE++LKLKV+EIYN++L EREQRK+F V+ GLLD++  Q   +++ ++ERE+   +R FARF SPEEH   V+GL+   R++K
Sbjct:  104 DEELLLLEGIEMFGMGNWKDIAEHVVTKSDKKCEVHYMTAYLGSKDLMPRFLGDPVEETKDEEATATAGGSAT-----AEKSSAGTLEAFDVASSALMLTDHTALRAPPAERSGPSQLAGYMPLRGDFDVEYDNEAEVILADMEFSDEDHPTERELKLKVIEIYNQKLTEREQRKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQSPEEHENFVEGLIAAMRLKK 332
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BLAST of mRNA_M-pyrifera_M_contig103388.715.1 vs. uniprot
Match: A0A8K1CL78_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL78_PYTOL)

HSP 1 Score: 184 bits (468), Expect = 3.850e-50
Identity = 102/217 (47.00%), Postives = 143/217 (65.90%), Query Frame = 1 
Query:    1 EEEELLVEALLLYGMGNWSDVGDHVGTKSAALCEKHYRTVYLAAPEGMPRRSAALLTGAALPPAPAVARSDAPPIPXXXXARSGPTLADLVASRYPKGVEVAGFMPLRGDFDVEHDNEAESLLADMEFGPEDHETEKQLKLKVVEIYNRRLDEREQRKRFAVDHGLLDFRRLQAAAKRKQRDEREVADSLRVFARFHSPEEHSELVDGLVEEKRIRK 651
            +EE LL+EA+ ++GMGNW D+ +HV TK+   CE HY   YL+  + +PR     L     P    +  +            +  T A ++  R P G E+AG+MPLRGDFDVE++NEAE +LADMEF  +DH TE++LKLKV+EIYN +LDER +RK+F V+ GLLD+++ Q + +R+ +DERE+   LR FARF SP+EH E V+GL+   R+RK
Sbjct:  158 DEELLLLEAIEMFGMGNWKDIAEHVATKNEKKCETHYLGAYLSRTDLLPR----FLDEPDSPDDVEMVDASVDLTSTSEQTTTTTTEASVLPER-PSGSELAGYMPLRGDFDVEYENEAELILADMEFSEDDHPTERELKLKVIEIYNAKLDERARRKKFVVERGLLDYKKHQQSERRRPKDEREIIAQLRPFARFQSPKEHEEFVNGLITAMRLRK 369
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BLAST of mRNA_M-pyrifera_M_contig103388.715.1 vs. uniprot
Match: A0A662X9Q8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9Q8_9STRA)

HSP 1 Score: 184 bits (467), Expect = 5.330e-50
Identity = 107/234 (45.73%), Postives = 146/234 (62.39%), Query Frame = 1 
Query:    1 EEEELLVEALLLYGMGNWSDVGDHVGTKSAALCEKHYRTVYLAAPEGMPR------------RSAALLTGAALPPAPAVARSDAPPIPXXXXARSGPTLADLVASRYPKGV-----EVAGFMPLRGDFDVEHDNEAESLLADMEFGPEDHETEKQLKLKVVEIYNRRLDEREQRKRFAVDHGLLDFRRLQAAAKRKQRDEREVADSLRVFARFHSPEEHSELVDGLVEEKRIRK 651
            +EE LL+E + ++GMGNW D+ +HV TK+   CE HY T YL + + MPR             SAA  +G+A        +S A  +       S   L D  A R P        ++AG+MPLRGDFDVE+DNEAE +LADMEF  EDH TE++LKLKV+EIYN++L EREQRK+F V+ GLLD++  Q   +++ ++ERE+   +R FARF SPEEH   V+GL+   R++K
Sbjct:  175 DEELLLLEGIEMFGMGNWKDIAEHVVTKADKKCEVHYMTAYLGSKDLMPRFLGDPVEETKDEDSAATASGSAT-----AEKSSAGTLEAFDVTSSALMLTDHTALRAPPAERSGPSQLAGYMPLRGDFDVEYDNEAEVILADMEFSDEDHPTERELKLKVIEIYNQKLTEREQRKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQSPEEHENFVEGLIAAMRLKK 403
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BLAST of mRNA_M-pyrifera_M_contig103388.715.1 vs. uniprot
Match: A0A024UKU7_9STRA (Transcriptional adapter n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKU7_9STRA)

HSP 1 Score: 177 bits (450), Expect = 7.580e-50
Identity = 98/217 (45.16%), Postives = 130/217 (59.91%), Query Frame = 1 
Query:    1 EEEELLVEALLLYGMGNWSDVGDHVGTKSAALCEKHYRTVYLAAPEGMPRRSAALLTGAALPPAPAVARSDAPPIPXXXXARSGPTLADLVASRYPKGVEVAGFMPLRGDFDVEHDNEAESLLADMEFGPEDHETEKQLKLKVVEIYNRRLDEREQRKRFAVDHGLLDFRRLQAAAKRKQRDEREVADSLRVFARFHSPEEHSELVDGLVEEKRIRK 651
            +EE LL+E + ++GMGNW D+ +HVGTK+   CE HY   YL                          +    P      +RS          +   G  +AG+MPLRGDFDVEHDN+AE +LADMEF  +DH TE++LKLKV+ IYN +LDERE+RK+F ++H LLD+++ Q   +R+ +DERE+   LR FARFHS EEH  LV GLV   R+RK
Sbjct:   82 DEELLLLEGIEMFGMGNWKDIAEHVGTKTDKKCESHYVVNYL--------------------------KLSMTPDSPEKQSRSNAATNAADDDKEKMGSALAGYMPLRGDFDVEHDNDAELILADMEFSEDDHPTERELKLKVIAIYNAKLDERERRKKFVIEHQLLDYKKYQQNERRRPKDERELVMQLRPFARFHSKEEHDALVGGLVAAMRLRK 272
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BLAST of mRNA_M-pyrifera_M_contig103388.715.1 vs. uniprot
Match: A0A067C7N6_SAPPC (Transcriptional adapter n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C7N6_SAPPC)

HSP 1 Score: 176 bits (447), Expect = 1.290e-49
Identity = 98/217 (45.16%), Postives = 136/217 (62.67%), Query Frame = 1 
Query:    1 EEEELLVEALLLYGMGNWSDVGDHVGTKSAALCEKHYRTVYLAAPEGMPRRSAALLTGAALPPAPAVARSDAPPIPXXXXARSGPTLADLVASRYPKGVEVAGFMPLRGDFDVEHDNEAESLLADMEFGPEDHETEKQLKLKVVEIYNRRLDEREQRKRFAVDHGLLDFRRLQAAAKRKQRDEREVADSLRVFARFHSPEEHSELVDGLVEEKRIRK 651
            +EE LL+E + ++GMGNW D+ +HV +K+   CE HY T YL     +   S A     A PPA A+A  D                      +   G  +AG+MPLRGDFDVEH+N+AE +LADMEF  +DH TE++LKLKV+ IYN +LDERE+RK+F ++HGLLD+++ Q   +R+ ++ERE+   +R FARFHS E+H   V GL+   R+RK
Sbjct:   79 DEELLLLEGIEMFGMGNWKDIAEHVASKTDKKCEAHYVTEYLKLRHPVDEPSPAK----AKPPAAALAADD---------------------EKEKMGGALAGYMPLRGDFDVEHENDAELILADMEFHDDDHPTERELKLKVIAIYNAKLDERERRKKFVIEHGLLDYKKYQQVERRRPKEERELIAQVRPFARFHSKEDHDTFVSGLLAAMRLRK 270
[Close]
BLAST of mRNA_M-pyrifera_M_contig103388.715.1 vs. uniprot
Match: A0A1W0A0X6_9STRA (Transcriptional adapter n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0X6_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.350e-49
Identity = 97/220 (44.09%), Postives = 136/220 (61.82%), Query Frame = 1 
Query:    1 EEEELLVEALLLYGMGNWSDVGDHVGTKSAALCEKHYRTVYLA---APEGMPRRSAALLTGAALPPAPAVARSDAPPIPXXXXARSGPTLADLVASRYPKGVEVAGFMPLRGDFDVEHDNEAESLLADMEFGPEDHETEKQLKLKVVEIYNRRLDEREQRKRFAVDHGLLDFRRLQAAAKRKQRDEREVADSLRVFARFHSPEEHSELVDGLVEEKRIRK 651
            +EE LL+E + ++GMGNW D+ DHV +K+   CE HY T YL     P+  P +S    +  +                      S PT  D    +   G  +AG++PLRGDFDVEHDN+AE +LADMEF  +DH TE++LKLKV+ IYN +LDERE+RK+F ++HGLLD+++ Q   +R+ ++ERE+   +R FARFHS E+H   V GL+   R+RK
Sbjct:   79 DEELLLLEGIEMFGMGNWKDIADHVASKTDKKCEAHYMTEYLKLDPTPDDSPVKSKTNSSSTS----------------------SLPTEED----KEKMGGALAGYLPLRGDFDVEHDNDAELILADMEFHDDDHPTERELKLKVISIYNAKLDERERRKKFVIEHGLLDYKKYQQVERRRPKEEREIIAQVRPFARFHSKEDHDTFVSGLIAAMRLRK 272
[Close]
BLAST of mRNA_M-pyrifera_M_contig103388.715.1 vs. uniprot
Match: A0A6G0XE69_9STRA (Transcriptional adapter n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XE69_9STRA)

HSP 1 Score: 175 bits (444), Expect = 3.090e-49
Identity = 96/217 (44.24%), Postives = 132/217 (60.83%), Query Frame = 1 
Query:    1 EEEELLVEALLLYGMGNWSDVGDHVGTKSAALCEKHYRTVYLAAPEGMPRRSAALLTGAALPPAPAVARSDAPPIPXXXXARSGPTLADLVASRYPKGVEVAGFMPLRGDFDVEHDNEAESLLADMEFGPEDHETEKQLKLKVVEIYNRRLDEREQRKRFAVDHGLLDFRRLQAAAKRKQRDEREVADSLRVFARFHSPEEHSELVDGLVEEKRIRK 651
            +EE LL+E + ++GMGNW D+ +HVGTKS   CE HY   YL  P               +P +P    +                 AD    +   G  +AG+MPLRGDFDVEHDN+AE +LADMEF  +DH TE++LKLKV+ IYN +LDERE+RK+F ++H LLD+++ Q   +R+ +DERE+   +R FARFHS E+H   + GL+   R+RK
Sbjct:   77 DEELLLLEGIEMFGMGNWKDIAEHVGTKSDKKCEAHYVVNYLKLP--------------LVPDSPETTTA---------------ARADEADDKEKMGSALAGYMPLRGDFDVEHDNDAELILADMEFHEDDHPTERELKLKVISIYNAKLDERERRKKFVIEHQLLDYKKYQQNERRRPKDERELVMHMRPFARFHSKEDHDAFLSGLIAAMRLRK 264
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103388.715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3R6XSD6_9STRA1.170e-5347.93Transcriptional adapter n=3 Tax=Aphanomyces astaci... [more]
K3X7P8_GLOUD2.650e-5346.98Transcriptional adapter n=1 Tax=Globisporangium ul... [more]
W4G8S8_9STRA4.220e-5247.93Transcriptional adapter n=3 Tax=Aphanomyces astaci... [more]
A0A662XDQ4_9STRA9.120e-5245.73Transcriptional adapter n=1 Tax=Nothophytophthora ... [more]
A0A8K1CL78_PYTOL3.850e-5047.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662X9Q8_9STRA5.330e-5045.73Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A024UKU7_9STRA7.580e-5045.16Transcriptional adapter n=2 Tax=Aphanomyces invada... [more]
A0A067C7N6_SAPPC1.290e-4945.16Transcriptional adapter n=2 Tax=Saprolegnia TaxID=... [more]
A0A1W0A0X6_9STRA1.350e-4944.09Transcriptional adapter n=1 Tax=Thraustotheca clav... [more]
A0A6G0XE69_9STRA3.090e-4944.24Transcriptional adapter n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103388contigM-pyrifera_M_contig103388:1..651 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score191.8
Seed ortholog evalue3.3e-46
Seed eggNOG ortholog36331.EPrPI00000022516
Preferred nameTADA2A
KEGG rclassRC00505,RC00738,RC02795
KEGG koko:K00457,ko:K03012,ko:K10391,ko:K11314
KEGG ReactionR00435,R00441,R00442,R00443,R01372,R02521
KEGG Pathwayko00130,ko00230,ko00240,ko00350,ko00360,ko01100,ko03020,ko05016,ko05169,map00130,map00230,map00240,map00350,map00360,map01100,map03020,map05016,map05169
KEGG ModuleM00044,M00180
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000123,GO:0000124,GO:0000125,GO:0000183,GO:0000228,GO:0000278,GO:0000724,GO:0000725,GO:0000785,GO:0000790,GO:0000981,GO:0001786,GO:0001932,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003700,GO:0003712,GO:0003713,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005671,GO:0005694,GO:0005819,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006325,GO:0006338,GO:0006342,GO:0006348,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0006974,GO:0006996,GO:0007049,GO:0007155,GO:0008150,GO:0008152,GO:0008289,GO:0009058,GO:0009059,GO:0009266,GO:0009299,GO:0009405,GO:0009409,GO:0009628,GO:0009631,GO:0009719,GO:0009725,GO:0009733,GO:0009735,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010520,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010629,GO:0010638,GO:0010810,GO:0010811,GO:0015630,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016569,GO:0016570,GO:0016573,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0022610,GO:0030155,GO:0030447,GO:0031056,GO:0031058,GO:0031063,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031505,GO:0031589,GO:0031647,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032502,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035065,GO:0035066,GO:0035327,GO:0035690,GO:0036211,GO:0040007,GO:0040020,GO:0040029,GO:0042127,GO:0042221,GO:0042325,GO:0042493,GO:0042710,GO:0042789,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043565,GO:0043708,GO:0043709,GO:0043900,GO:0043902,GO:0043966,GO:0043967,GO:0044010,GO:0044111,GO:0044114,GO:0044115,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044764,GO:0045229,GO:0045785,GO:0045814,GO:0045892,GO:0045934,GO:0045935,GO:0046483,GO:0046695,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051445,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0060255,GO:0060631,GO:0065007,GO:0065008,GO:0070013,GO:0070461,GO:0070887,GO:0071214,GO:0071470,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0072341,GO:0072686,GO:0080090,GO:0090043,GO:0090304,GO:0090311,GO:0090605,GO:0090609,GO:0097159,GO:0097659,GO:0104004,GO:0140110,GO:1900187,GO:1900189,GO:1900190,GO:1900192,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901983,GO:1901985,GO:1902275,GO:1902493,GO:1902494,GO:1902562,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905269,GO:1905368,GO:1990234,GO:1990414,GO:2000112,GO:2000113,GO:2000241,GO:2000756,GO:2000758,GO:2001141,GO:2001252
EggNOG free text desc.Transcriptional adapter 2-alpha. Source PGD
EggNOG OGs1MGKE@121069,COG0020@1,COG5114@1,KOG0457@2759,KOG1602@2759
EC1.13.11.27
COG Functional cat.K
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03036,ko03400,ko04147,ko04812
Exons1
Model size651
Cds size651
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815538.8917534-CDS-M-pyrifera_M_contig103388:0..6511622815538.8917534-CDS-M-pyrifera_M_contig103388:0..651Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103388 1..651 +
1692277454.8816848-CDS-M-pyrifera_M_contig103388:0..6511692277454.8816848-CDS-M-pyrifera_M_contig103388:0..651Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103388 1..651 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103388.715.1prot_M-pyrifera_M_contig103388.715.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103388 1..651 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103388.715.1

>prot_M-pyrifera_M_contig103388.715.1 ID=prot_M-pyrifera_M_contig103388.715.1|Name=mRNA_M-pyrifera_M_contig103388.715.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
EEEELLVEALLLYGMGNWSDVGDHVGTKSAALCEKHYRTVYLAAPEGMPR
RSAALLTGAALPPAPAVARSDAPPIPPPPPARSGPTLADLVASRYPKGVE
VAGFMPLRGDFDVEHDNEAESLLADMEFGPEDHETEKQLKLKVVEIYNRR
LDEREQRKRFAVDHGLLDFRRLQAAAKRKQRDEREVADSLRVFARFHSPE
EHSELVDGLVEEKRIRK
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mRNA from alignment at M-pyrifera_M_contig103388:1..651+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103388.715.1 ID=mRNA_M-pyrifera_M_contig103388.715.1|Name=mRNA_M-pyrifera_M_contig103388.715.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=651bp|location=Sequence derived from alignment at M-pyrifera_M_contig103388:1..651+ (Macrocystis pyrifera P11B4 male)
GAGGAGGAGGAGCTGCTGGTGGAGGCGCTGCTGCTGTACGGCATGGGCAA
CTGGTCTGACGTGGGCGACCACGTGGGCACCAAGTCCGCAGCGCTGTGCG
AAAAGCACTATCGCACAGTGTACCTTGCTGCACCGGAGGGCATGCCTAGA
CGCTCGGCAGCACTGCTGACTGGCGCTGCGCTGCCCCCTGCGCCGGCCGT
GGCGCGGTCGGACGCGCCGCCCATCCCGCCGCCCCCACCCGCGCGGAGCG
GGCCCACGCTGGCCGACCTGGTGGCTTCTCGCTACCCCAAGGGCGTGGAG
GTGGCTGGCTTCATGCCGCTGCGTGGCGACTTTGACGTGGAGCACGACAA
CGAGGCGGAGTCGCTGCTGGCGGACATGGAGTTTGGGCCGGAGGATCACG
AGACGGAGAAGCAGCTGAAGCTCAAGGTGGTGGAGATCTACAATCGACGG
CTGGACGAGCGGGAGCAGCGCAAGCGTTTCGCCGTAGACCACGGCCTGCT
GGACTTCCGCCGGCTGCAGGCGGCCGCCAAGCGCAAGCAGCGGGACGAGC
GGGAGGTGGCGGACAGCCTGCGCGTGTTTGCGCGGTTCCACTCGCCGGAG
GAGCACAGCGAGCTGGTGGACGGGCTGGTGGAGGAGAAGCGCATCCGGAA
G
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig103388:1..651+

>mRNA_M-pyrifera_M_contig103388.715.1 ID=mRNA_M-pyrifera_M_contig103388.715.1|Name=mRNA_M-pyrifera_M_contig103388.715.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig103388:1..651+ (Macrocystis pyrifera P11B4 male)
GAGGAGGAGGAGCTGCTGGTGGAGGCGCTGCTGCTGTACGGCATGGGCAA
CTGGTCTGACGTGGGCGACCACGTGGGCACCAAGTCCGCAGCGCTGTGCG
AAAAGCACTATCGCACAGTGTACCTTGCTGCACCGGAGGGCATGCCTAGA
CGCTCGGCAGCACTGCTGACTGGCGCTGCGCTGCCCCCTGCGCCGGCCGT
GGCGCGGTCGGACGCGCCGCCCATCCCGCCGCCCCCACCCGCGCGGAGCG
GGCCCACGCTGGCCGACCTGGTGGCTTCTCGCTACCCCAAGGGCGTGGAG
GTGGCTGGCTTCATGCCGCTGCGTGGCGACTTTGACGTGGAGCACGACAA
CGAGGCGGAGTCGCTGCTGGCGGACATGGAGTTTGGGCCGGAGGATCACG
AGACGGAGAAGCAGCTGAAGCTCAAGGTGGTGGAGATCTACAATCGACGG
CTGGACGAGCGGGAGCAGCGCAAGCGTTTCGCCGTAGACCACGGCCTGCT
GGACTTCCGCCGGCTGCAGGCGGCCGCCAAGCGCAAGCAGCGGGACGAGC
GGGAGGTGGCGGACAGCCTGCGCGTGTTTGCGCGGTTCCACTCGCCGGAG
GAGCACAGCGAGCTGGTGGACGGGCTGGTGGAGGAGAAGCGCATCCGGAA
GGAGGAGGAGGAGCTGCTGGTGGAGGCGCTGCTGCTGTACGGCATGGGCA
ACTGGTCTGACGTGGGCGACCACGTGGGCACCAAGTCCGCAGCGCTGTGC
GAAAAGCACTATCGCACAGTGTACCTTGCTGCACCGGAGGGCATGCCTAG
ACGCTCGGCAGCACTGCTGACTGGCGCTGCGCTGCCCCCTGCGCCGGCCG
TGGCGCGGTCGGACGCGCCGCCCATCCCGCCGCCCCCACCCGCGCGGAGC
GGGCCCACGCTGGCCGACCTGGTGGCTTCTCGCTACCCCAAGGGCGTGGA
GGTGGCTGGCTTCATGCCGCTGCGTGGCGACTTTGACGTGGAGCACGACA
ACGAGGCGGAGTCGCTGCTGGCGGACATGGAGTTTGGGCCGGAGGATCAC
GAGACGGAGAAGCAGCTGAAGCTCAAGGTGGTGGAGATCTACAATCGACG
GCTGGACGAGCGGGAGCAGCGCAAGCGTTTCGCCGTAGACCACGGCCTGC
TGGACTTCCGCCGGCTGCAGGCGGCCGCCAAGCGCAAGCAGCGGGACGAG
CGGGAGGTGGCGGACAGCCTGCGCGTGTTTGCGCGGTTCCACTCGCCGGA
GGAGCACAGCGAGCTGGTGGACGGGCTGGTGGAGGAGAAGCGCATCCGGA
AG
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