mRNA_M-pyrifera_M_contig103379.713.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103379.713.1 vs. uniprot
Match: A0A2P6MQV1_9EUKA (PH domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MQV1_9EUKA) HSP 1 Score: 72.0 bits (175), Expect = 4.690e-11 Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 1 Query: 4 EGQLQKKGDRGPLRNWRTRTFRLCEASRTAKYFDGAKQ---MGSIDLNAVTRAEREERAKDHRFNVHTPKRVYHLKAADEAAVDEWIAAFMRF-----ATPAEEREAKKD 309
EG LQKKGD GP++NW+ R FRL YF A+ +G+IDL T R K+H F++ TP R ++L+ +++ + WIA + + P E +E K+
Sbjct: 152 EGYLQKKGDVGPIKNWKKRHFRLYAEEHKIAYFKSAEDTESLGTIDLKTATGLNRTTYKKEHGFDIKTPSRTWNLRTDNKSDYEGWIAVLEKTTGVSASAPTEAKEEGKE 261
BLAST of mRNA_M-pyrifera_M_contig103379.713.1 vs. uniprot
Match: A0A8J4Q370_9MYCE (PH domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q370_9MYCE) HSP 1 Score: 53.9 bits (128), Expect = 6.770e-5 Identity = 32/102 (31.37%), Postives = 55/102 (53.92%), Query Frame = 1 Query: 1 LEGQLQKKGDRGPLRNWRTRTFRLCEASRTAKYFD----------------GAKQMGSIDLNAVTRAEREERAKDHRFNVHTPKRVYHLKAADEAAVDEWIA 258
+EG L K+G++G ++ ++TR F+L + Y++ GA +GSIDL VT ++ + + F+V P R Y L+A DE++V+ WI+
Sbjct: 7 IEGWLDKQGEKGLIKGFKTRYFQLSKNGYDLHYYESQPPEEVSFNSNIGVVGANSLGSIDLKQVTSTKKFD---NFIFHVEVPGRSYILRAKDESSVNYWIS 105 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103379.713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103379.713.1 >prot_M-pyrifera_M_contig103379.713.1 ID=prot_M-pyrifera_M_contig103379.713.1|Name=mRNA_M-pyrifera_M_contig103379.713.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=212bp LEGQLQKKGDRGPLRNWRTRTFRLCEASRTAKYFDGAKQMGSIDLNAVTRback to top mRNA from alignment at M-pyrifera_M_contig103379:2..637- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103379.713.1 ID=mRNA_M-pyrifera_M_contig103379.713.1|Name=mRNA_M-pyrifera_M_contig103379.713.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig103379:2..637- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103379:2..637- >mRNA_M-pyrifera_M_contig103379.713.1 ID=mRNA_M-pyrifera_M_contig103379.713.1|Name=mRNA_M-pyrifera_M_contig103379.713.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1272bp|location=Sequence derived from alignment at M-pyrifera_M_contig103379:2..637- (Macrocystis pyrifera P11B4 male)back to top |