mRNA_M-pyrifera_M_contig103376.711.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103376.711.1 vs. uniprot
Match: V4AEN9_LOTGI (APC1_C domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AEN9_LOTGI) HSP 1 Score: 164 bits (415), Expect = 5.330e-43 Identity = 92/222 (41.44%), Postives = 138/222 (62.16%), Query Frame = 1 Query: 1 TNDSSIAAALAAPDTVFLLDGVRPDILMLRVTCRSLILWDAVEATQEWLESQLPSVIFQH-IADPLSDRF-TSLERETLEHARLHIIAGAALALGIRFAGTHSQAASGLVLEQVAVLLAAADSKPVPGQREL-NPHLIERCLLTAALASSLIMSGSGDERCHALYSRLYARPEAPHI--TYGSHMAVAMCNGMLCLGGGKLTLKRTPEAVAYLLCAVFPFFP 651 TN+S++A L APDT F+L+ V+PD LMLR R L+LWDAV TQEW+ S +P ++ ++ + + + +++ ET+ A +I GA + LG++FAG+ +Q A L++EQ+ + L VP E+ L+E CL + L+ S++M G+GD R L L R H+ TYGSHMA++M G+L LGGGK +LK TP+A+ +LCA +P FP Sbjct: 1404 TNNSAVAEWLKAPDTQFMLNNVQPDFLMLRTLSRGLVLWDAVVPTQEWVSSNIPEIVSKYAFKENVEINYDVNIDYETMSQAYCSLITGAFMVLGLKFAGSANQMAFDLMMEQMKLCLRLIS---VPALVEMAGKSLVENCLCSILLSLSMVMCGTGDLRVLRLCRMLRKRVGLQHVYTTYGSHMAISMATGLLFLGGGKYSLKTTPDAIGVMLCAFYPRFP 1622
BLAST of mRNA_M-pyrifera_M_contig103376.711.1 vs. uniprot
Match: F2U976_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U976_SALR5) HSP 1 Score: 158 bits (399), Expect = 7.560e-41 Identity = 97/220 (44.09%), Postives = 132/220 (60.00%), Query Frame = 1 Query: 1 TNDSSIAAALAAPDTVFLLDGVRPDILMLRVTCRSLILWDAVEATQEWLESQLPSVIFQHIADPLS-DRFTSLERETLEHARLHIIAGAALALGIRFAGTHSQAASGLVLEQVAVLLAAADSKPVPG--QRELNPHLIERCLLTAALASSLIMSGSGDERCHALYSRLYARPEAPHITYGSHMAVAMCNGMLCLGGGKLTLKRTPEAVAYLLCAVFPFFP 651 TN+ ++AA LA PDT FLLD VRPD+L+L V RSLILWD +E T+EW++SQ P V+ ++ + R ET A++ I+AGA LALG+RFAGT Q A ++ V + K +P R +NP + CL TA LA+S++M+G+G + L A +YG HMA+ M G+L LGGG +TL R+ EA+A LL A FP FP Sbjct: 1713 TNNEAVAARLALPDTQFLLDTVRPDVLLLLVMSRSLILWDDIEPTREWIDSQCPPVVQRYAIENRDVHRVDEDVLETARQAQVFILAGACLALGLRFAGTAHQGAVDAIMSVVELY-----RKKIPPLEARRINPINVATCLHTALLAASMVMAGTGYIPVLRIIRALRTE-SAVKTSYGHHMAMHMAAGLLFLGGGTMTLSRSNEAIAALLMAFFPKFP 1926
BLAST of mRNA_M-pyrifera_M_contig103376.711.1 vs. uniprot
Match: D8SX20_SELML (APC1_C domain-containing protein n=9 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SX20_SELML) HSP 1 Score: 154 bits (390), Expect = 1.180e-39 Identity = 92/225 (40.89%), Postives = 135/225 (60.00%), Query Frame = 1 Query: 1 TNDSSIAAALAAPDTVFLLDGVRPDILMLRVTCRSLILWDAVEATQEWLESQLPSVIFQHI-----ADPLSDRFTSLERETLEHARLHIIAGAALALGIRFAGTHSQAASGLVLEQVAVLL---AAADSKPVPGQRELNPHLIERCLLTAALASSLIMSGSGDERCHALYSRLYARPEAPHITYGSHMAVAMCNGMLCLGGGKLTLKRTPEAVAYLLCAVFPFFP 651 TND +AA LA PDT F L+ VRPD ++LR+ RSLILWD+V+AT+EW++SQ+P +I Q + +D +D L+ E L A ++I+AGA L++G+R+AGT + A L+ + + A S P R ++ +E CL A L+ S++M+G+G L L R + I YG+HMAV++ G L LGGG LT + AVA LL +++P FP Sbjct: 1083 TNDHVVAARLAIPDTHFALEYVRPDFILLRLIARSLILWDSVQATEEWIQSQVPDIIRQAVVQAKGSDAGADVTPDLDMEALTQAHVNILAGACLSIGLRYAGTANAEAQTLLQHYALYFMKEKSQAASGTSPNDRRVDRGTLETCLDVAVLSLSVVMAGTGHLETLRLLRYLRQRNDTD-IVYGNHMAVSLAIGFLFLGGGSLTFSTSNGAVAALLISLYPRFP 1306
BLAST of mRNA_M-pyrifera_M_contig103376.711.1 vs. uniprot
Match: UPI000A0EDFF3 (anaphase-promoting complex subunit 1 isoform X1 n=3 Tax=Athalia rosae TaxID=37344 RepID=UPI000A0EDFF3) HSP 1 Score: 154 bits (388), Expect = 2.230e-39 Identity = 89/221 (40.27%), Postives = 135/221 (61.09%), Query Frame = 1 Query: 1 TNDSSIAAALAAPDTVFLLDGVRPDILMLRVTCRSLILWDAVEATQEWLESQLPSVIFQH-IADPLSDRFTSLERETLEHARLHIIAGAALALGIRFAGTHSQAASGLVLEQVAVLLAAADSKPVPGQREL-NPHLIERCLLTAALASSLIMSGSGDERCHAL--YSRLYARPEAPHITYGSHMAVAMCNGMLCLGGGKLTLKRTPEAVAYLLCAVFPFFP 651 T + ++A + APDT ++LD VRPD+L+LR+ +SLILWD ++ T W+ S +P +++Q+ + P + S++ ET+ A +IIAGA LALG+++AG+ ++ AS L A + A K + EL IE CL LA++ +M+G+GD + + Y R P + +TYGSH+A M G+L LGGG+ TL +P AVA LL A+FP FP Sbjct: 1408 TGNRAVAQWMEAPDTQYMLDFVRPDLLLLRILAKSLILWDEIQPTTSWVSSHVPEIVYQYRLQKPTPETLQSVDLETMNQAYCNIIAGACLALGLKYAGSANKNAS-KTLYNYAQIFTALSHKSIA---ELAGKSTIETCLNVILLAAASVMAGTGDLQILRICRYIRTRVGPASSVVTYGSHLATHMALGLLFLGGGRYTLSNSPSAVAALLIALFPKFP 1624
BLAST of mRNA_M-pyrifera_M_contig103376.711.1 vs. uniprot
Match: A0A8H7UKN2_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UKN2_MORIS) HSP 1 Score: 152 bits (385), Expect = 5.560e-39 Identity = 81/221 (36.65%), Postives = 134/221 (60.63%), Query Frame = 1 Query: 1 TNDSSIAAALAAPDTVFLLDGVRPDILMLRVTCRSLILWDAVEATQEWLESQLPSVIFQHIADPL--SDRF--TSLERETLEHARLHIIAGAALALGIRFAGTHSQAASGLVLEQVAVLLAAADSKPVPGQRELNPHLIERCLLTAALASSLIMSGSGDERCHALYSRLYARPEAPHITYGSHMAVAMCNGMLCLGGGKLTLKRTPEAVAYLLCAVFPFFP 651 T D +A + PDT+ +LD +RPD L+LRV R+LI+W ++A++ W+ QLP I + D + SD F + + E L+ A +II G +++G+R+AG+ ++ A +LE+ + S Q+++ L++ C A A++++M+G+G++ H S L+ R P +TYGSHMA+ M +G+L +GGGK TL + A+A LLC+ +PFFP Sbjct: 1429 TEDVRVAEKIGLPDTLPMLDYIRPDFLLLRVLSRNLIMWSQIKASENWINDQLPEFIKSALNDQVVESDEFWASHCDMEVLQQAACNIITGCCVSIGLRYAGSRNEKAFKCLLEKFDYFAKRSQSSAANFQQKITRSLMKACRDIVATAAAMVMAGTGNQELHERLSVLHERV-GPDVTYGSHMAIHMASGLLFIGGGKYTLGTSNLAIATLLCSFYPFFP 1648
BLAST of mRNA_M-pyrifera_M_contig103376.711.1 vs. uniprot
Match: UPI0012D47676 (anaphase-promoting complex subunit 1 n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D47676) HSP 1 Score: 152 bits (385), Expect = 5.600e-39 Identity = 90/222 (40.54%), Postives = 133/222 (59.91%), Query Frame = 1 Query: 1 TNDSSIAAALAAPDTVFLLDGVRPDILMLRVTCRSLILWDAVEATQEWLESQLPSVI-FQHIADPLSDRFTSLERETLEHARLHIIAGAALALGIRFAGTHSQAASGLVLEQVAVLLAAADSKPVPGQRELNPHLIERCLLTAALASSLIMSGSGD----ERCHALYSRLYARPEAPHITYGSHMAVAMCNGMLCLGGGKLTLKRTPEAVAYLLCAVFPFFP 651 T + S+A+ + PDT +LD VRPD+L++RV R LILW+ ++ T+EWL + P+ + + P+ + + +RE+ A +I AGAA LG+R+AGT ++ A+ +L+Q+ L +S V +E CL+ LASSL+ +G+GD RC L +RL H+TYGSHMAV M G LG G+ TL R+PEA+A L+CA+FP FP Sbjct: 1372 TGNKSVASWMNPPDTHAVLDDVRPDLLLIRVIARGLILWNDIQPTKEWLRTNFPTWLQIDLLQSPMRNSESLADRESFAQAYCNITAGAAFCLGLRYAGTQNEEANS-ILDQIFKLF--LNSNSVYLNECAGKPTVESCLMLVLLASSLVNAGTGDLRVLRRCRMLRNRLGVGYS--HVTYGSHMAVHMAIGFQFLGAGRYTLSRSPEAIAALICALFPKFP 1588
BLAST of mRNA_M-pyrifera_M_contig103376.711.1 vs. uniprot
Match: UPI00067CBEB5 (anaphase-promoting complex subunit 1 n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067CBEB5) HSP 1 Score: 152 bits (385), Expect = 5.640e-39 Identity = 97/222 (43.69%), Postives = 129/222 (58.11%), Query Frame = 1 Query: 1 TNDSSIAAALAAPDTVFLLDGVRPDILMLRVTCRSLILWDAVEATQEWLESQLPSVIFQH-IADPLSDRFTSLERETLEHARLHIIAGAALALGIRFAGTHSQAASGLVLEQVAVLLAAADSK--PVPGQRELNPHLIERCLLTAALASSLIMSGSGDERCHALYSRLYAR--PEAPHITYGSHMAVAMCNGMLCLGGGKLTLKRTPEAVAYLLCAVFPFFP 651 +N ++ AA LAAP T + LD VRPD+LMLR+ R L+LWD++EA++EW+ Q+P+ I + P D S++ E + A +IIAGA+ ALG+RFAG+ + A VL LA + G+ L E CL LA+ +IMSG GD R L RL AR P AP +T+G MAV G+L LGG + TL TP A+A LL A FP FP Sbjct: 1521 SNCAAPAAWLAAPTTPYQLDFVRPDLLMLRIIARGLVLWDSIEASEEWIRDQVPATIKPYCFVKPTDD---SIDYEAMNQAYCNIIAGASFALGLRFAGSGDEDARDAVLHHAKFFLATTTKSIAELAGRSTL-----ETCLCVCLLAAGMIMSGRGDVRVLRLCRRLRARAAPAAPALTHGGQMAVHCTIGLLFLGGCRATLSTTPTAIAALLAAFFPKFP 1734
BLAST of mRNA_M-pyrifera_M_contig103376.711.1 vs. uniprot
Match: A0A6V7HRA9_9HYME (Uncharacterized protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7HRA9_9HYME) HSP 1 Score: 144 bits (364), Expect = 7.730e-39 Identity = 83/216 (38.43%), Postives = 133/216 (61.57%), Query Frame = 1 Query: 13 SIAAALAAPDTVFLLDGVRPDILMLRVTCRSLILWDAVEATQEWLESQLPSVIFQH-IADPLSDRFTSLERETLEHARLHIIAGAALALGIRFAGTHSQAASGLVLEQVAVLLAAADSKPVPGQRELNPHLIERCLLTAALASSLIMSGSGDERCHALYSRLYAR--PEAPHITYGSHMAVAMCNGMLCLGGGKLTLKRTPEAVAYLLCAVFPFFP 651 ++A + AP T FLLD VRPD L+LR+ RSLILWD +E T W+ S +P +++++ + P SD +++ ET+ A +IIAGA +ALG+++AGT ++ A ++LE A + A K + G+ IE CL L+++++M+G+G+ + ++ R P + +TYGSH+ M G+L LGGG+ T +P AVA L+ ++FP FP Sbjct: 3 AVAEWMKAPGTQFLLDFVRPDFLLLRILARSLILWDEIEPTNVWIISHVPDIVYKYRLQKPTSDIIQNVDLETMNQAYCNIIAGACMALGLKYAGTANKNAFKILLEY-AHMFTALSHKSI-GELA-GKSTIETCLNVTLLSAAVVMAGTGNLEIMRICRQIRTRVGPGSSVVTYGSHLTTHMALGILFLGGGRYTFSNSPSAVAALIISLFPKFP 215
BLAST of mRNA_M-pyrifera_M_contig103376.711.1 vs. uniprot
Match: A0A8B8IUW2_9NEOP (anaphase-promoting complex subunit 1-like n=1 Tax=Vanessa tameamea TaxID=334116 RepID=A0A8B8IUW2_9NEOP) HSP 1 Score: 152 bits (383), Expect = 9.460e-39 Identity = 97/227 (42.73%), Postives = 133/227 (58.59%), Query Frame = 1 Query: 1 TNDSSIAAALAAPDTVFLLDGVRPDILMLRVTCRSLILWDAVEATQEWLESQLPSVIFQH-IADPLSDRFTSLERETLEHARLHIIAGAALALGIRFAGTHSQAASGLVLEQVAVLLAAADSKPVPGQRELNPHLIERCLLTAALASSLIMSGSGDERCHALYSRLYAR-PEAPH--------ITYGSHMAVAMCNGMLCLGGGKLTLKRTPEAVAYLLCAVFPFFP 651 T +++AA LA P T +LLD VRPD+LMLRV R L++WD +EA++EW+ESQ+PS I + P D +++ E + A +IIAGA ALG+RFAG+ +AA L A+ L A ++P+ +E C LA+ +IMSG GD + RL AR P AP +T+G+ MAV G+L LGGG+ TL +PEAVA L+ A FP FP Sbjct: 409 TRSAAVAAWLAPPRTAYLLDFVRPDLLMLRVIARGLVMWDDIEASEEWVESQVPSTIKPYCFVKPTED---NIDYEAMNQAYCNIIAGACFALGLRFAGSGCEAARDAALHYTALFLRLA-ARPLADLA--GGSTLEACTCVCLLAAGMIMSGRGDVSVLRVCRRLRARVPVAPRAAPPAPAPLTHGAQMAVHNTIGLLFLGGGRCTLSSSPEAVAALITAFFPKFP 629
BLAST of mRNA_M-pyrifera_M_contig103376.711.1 vs. uniprot
Match: UPI001F145CF7 (anaphase-promoting complex subunit 1 n=2 Tax=Vanessa TaxID=42274 RepID=UPI001F145CF7) HSP 1 Score: 150 bits (380), Expect = 2.640e-38 Identity = 96/227 (42.29%), Postives = 133/227 (58.59%), Query Frame = 1 Query: 1 TNDSSIAAALAAPDTVFLLDGVRPDILMLRVTCRSLILWDAVEATQEWLESQLPSVIFQH-IADPLSDRFTSLERETLEHARLHIIAGAALALGIRFAGTHSQAASGLVLEQVAVLLAAADSKPVPGQRELNPHLIERCLLTAALASSLIMSGSGDERCHALYSRLYAR-PEAPH--------ITYGSHMAVAMCNGMLCLGGGKLTLKRTPEAVAYLLCAVFPFFP 651 T +++AA LA P T +LLD VRPD+LMLRV R L++WD +EA++EW+ESQ+PS I + P D +++ E + A +IIAGA ALG+RFAG+ +AA L A+ L A ++P+ +E C LA+ +IM+G GD + RL AR P AP +T+G+ MAV G+L LGGG+ TL +PEAVA L+ A FP FP Sbjct: 1494 TRSAAVAAWLAPPRTAYLLDFVRPDLLMLRVIARGLVMWDDIEASEEWVESQVPSTIKPYCFVKPTED---NIDYEAMNQAYCNIIAGACFALGLRFAGSGCEAARDAALHYTALFLRLA-ARPLADLA--GGSTLEACTCVCLLAAGMIMAGRGDISVLRVCRRLRARVPVAPRAAPPAPAPLTHGAQMAVHSTIGLLFLGGGRCTLSSSPEAVAALITAFFPKFP 1714 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103376.711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103376.711.1 >prot_M-pyrifera_M_contig103376.711.1 ID=prot_M-pyrifera_M_contig103376.711.1|Name=mRNA_M-pyrifera_M_contig103376.711.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp TNDSSIAAALAAPDTVFLLDGVRPDILMLRVTCRSLILWDAVEATQEWLEback to top mRNA from alignment at M-pyrifera_M_contig103376:1..651- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103376.711.1 ID=mRNA_M-pyrifera_M_contig103376.711.1|Name=mRNA_M-pyrifera_M_contig103376.711.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=651bp|location=Sequence derived from alignment at M-pyrifera_M_contig103376:1..651- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103376:1..651- >mRNA_M-pyrifera_M_contig103376.711.1 ID=mRNA_M-pyrifera_M_contig103376.711.1|Name=mRNA_M-pyrifera_M_contig103376.711.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig103376:1..651- (Macrocystis pyrifera P11B4 male)back to top |