mRNA_M-pyrifera_M_contig103320.704.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103320.704.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA) HSP 1 Score: 371 bits (953), Expect = 3.570e-126 Identity = 201/217 (92.63%), Postives = 208/217 (95.85%), Query Frame = 1
Query: 1 QRSEFAPTEELRTRLENMFREQQETARQVRVEERQRQMEDKLTAEAGAGAGAVVSAGGVDDGAATTADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPVAAVLLALRSLPFATLVGFFSLSALSSNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLADAGSDVVFLGMLAAVAYSVVTSSTGAFPNKLPLLGRINRE 651
QRSEFAPTEELRTRLENMFR+QQETARQ RVEERQRQMEDKL AE G GAGAVV AGGV+DG AT ADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQP+AAVLLALRSLPFATLVGFFSLSALS NPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLA+AGSDVVF+ MLAAVAYSVVTSSTG+FPNKLPLLGR+NRE
Sbjct: 188 QRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDKLAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRE 404
BLAST of mRNA_M-pyrifera_M_contig103320.704.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE) HSP 1 Score: 287 bits (734), Expect = 6.870e-95 Identity = 158/217 (72.81%), Postives = 180/217 (82.95%), Query Frame = 1
Query: 1 QRSEFAPTEELRTRLENMFREQQETARQVRVEERQRQMEDKLTAEAGAGAGAVVSAGGVDDGAATTADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPVAAVLLALRSLPFATLVGFFSLSALSSNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLADAGSDVVFLGMLAAVAYSVVTSSTGAFPNKLPLLGRINRE 651
Q+SEFAPTEELRTRLEN+F +Q+E R R+E K+ +AGA VS G V+DG ATTADKALSALPY+LPL DG+ FA HLFGAFPEQTAWAQP+AAVLLALRS+PFATLVGFFSLS SSNPQ+NKLVRFNMQQAINLDIALI+PGV+GA+ LG DA KL PLA+AGSDVVF+ +LAAVAYSV TS+TG+FPNKLPLLGR+NRE
Sbjct: 53 QQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRPDAGA---VEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRE 266
BLAST of mRNA_M-pyrifera_M_contig103320.704.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI) HSP 1 Score: 287 bits (734), Expect = 5.290e-93 Identity = 156/217 (71.89%), Postives = 180/217 (82.95%), Query Frame = 1
Query: 1 QRSEFAPTEELRTRLENMFREQQETARQVRVEERQRQMEDKLTAEAGAGAGAVVSAGGVDDGAATTADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPVAAVLLALRSLPFATLVGFFSLSALSSNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLADAGSDVVFLGMLAAVAYSVVTSSTGAFPNKLPLLGRINRE 651
Q+SEFAPTEELRTRLEN+F +Q+E R R+E D++ +AG VVS G V+DG ATTADKALSALPY+LPL DG+ FA HLFGAFPEQTAWAQP+AAVLLALRS+PFATL+GFFSLS SSNPQ+NKLVRFNMQQAINLDIALI+PGV+GA+ LG DA KL PLA+A SDVVF+ +LAAVAYSV TS+TG+FPNKLPLLGR+NRE
Sbjct: 190 QQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGT---VVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRE 403
BLAST of mRNA_M-pyrifera_M_contig103320.704.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI) HSP 1 Score: 275 bits (704), Expect = 1.180e-88 Identity = 153/202 (75.74%), Postives = 173/202 (85.64%), Query Frame = 1
Query: 1 QRSEFAPTEELRTRLENMFREQQETARQVRVEERQRQMEDKLTAEAGAGAGAVVSAGGVDDGAATTADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPVAAVLLALRSLPFATLVGFFSLSALSSNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLADAGSDVVFLGMLAAVAYSVVTSSTG 606
Q+SEFAPTEELRTRLEN+ +Q+E R R+EERQRQM+DK+ + GA VVS G V+DG ATTADKALSALPYLLPLVDGI FA HLFGAFPEQTAWAQP+AAVLLALRSLPFATL+GFFSLS SSNP+VNKLVRFNMQQAINLDIALI+PGV+GA+ LG DA KL PL++AGSDVVF+ +LAAVAYSV TS+TG
Sbjct: 190 QQSEFAPTEELRTRLENLLSQQREDERLARLEERQRQMDDKMRPDTGA---VVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388
BLAST of mRNA_M-pyrifera_M_contig103320.704.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE) HSP 1 Score: 265 bits (678), Expect = 1.420e-87 Identity = 141/187 (75.40%), Postives = 162/187 (86.63%), Query Frame = 1
Query: 91 VEERQRQMEDKLTAEAGAGAGAVVSAGGVDDGAATTADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPVAAVLLALRSLPFATLVGFFSLSALSSNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLADAGSDVVFLGMLAAVAYSVVTSSTGAFPNKLPLLGRINRE 651
+EERQRQM+DK+ +AGA VS G V+DG ATTADKALSALPY+LPL DG+ FA HLFGAFPEQTAWA+P+ AVLLALRS+PFATL+GFFSLS SSNPQ+NKLVRFNMQQAINLDIALI+PGV+GA+ LG DA KL PLA+AGSDVVF+ +LAAVAYSV TS+TG+FPNKLPLLGR+NRE
Sbjct: 1 MEERQRQMDDKMRPDAGA---VEVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAVLGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRE 184
BLAST of mRNA_M-pyrifera_M_contig103320.704.1 vs. uniprot
Match: A0A6H5KCI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI4_9PHAE) HSP 1 Score: 217 bits (553), Expect = 6.140e-68 Identity = 128/217 (58.99%), Postives = 149/217 (68.66%), Query Frame = 1
Query: 1 QRSEFAPTEELRTRLENMFREQQETARQVRVEERQRQMEDKLTAEAGAGAGAVVSAGGVDDGAATTADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPVAAVLLALRSLPFATLVGFFSLSALSSNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLADAGSDVVFLGMLAAVAYSVVTSSTGAFPNKLPLLGRINRE 651
Q+SEFAPTEELRTRLEN+F +Q+E R R+EERQRQM+D + +AGA VVS G V+DG TAD ALSALPYLLPL DGI FA HLFG FPEQTAWAQP+AA AIN+DIALI+PGV+GA+A LG DA KL PLA+AGSDVVF+ +LAAVAYSV TS+TG+FP+KLPLLGR+NRE
Sbjct: 54 QQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRPDAGA---VVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAA--------------------------------------AINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPSKLPLLGRLNRE 229
BLAST of mRNA_M-pyrifera_M_contig103320.704.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE) HSP 1 Score: 218 bits (556), Expect = 2.610e-66 Identity = 117/219 (53.42%), Postives = 160/219 (73.06%), Query Frame = 1
Query: 1 QRSEFAPTEELRTRLENMFREQQETARQVRVEERQRQMEDKLTAEAGAGAGAVVSAGGVDD---GAATTADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPVAAVLLALRSLPFATLVGFFSLSALSSNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLADAGSDVVFLGMLAAVAYSVVTSSTGAFPNKLPLLGRINR 648
Q+SEFAPTEELR RLE++FRE++E + R ER+R+M+ K T G G ++S+ D +AT+ +KAL ALPY+LPL DGI +A H++ FP+Q AW++P+ A+L+A+ +LPFATLV FF +S LSSN +NKL+RFNM QAIN DIALIVP V G L + SLG DAYK+ P+ D +D++ + ++ AVAYS+ S+TGA PNK+P G+INR
Sbjct: 185 QQSEFAPTEELRARLESIFRERREEELEARQAERKREMDAKTT-----GKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLTWSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINR 398
BLAST of mRNA_M-pyrifera_M_contig103320.704.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE) HSP 1 Score: 205 bits (521), Expect = 3.230e-62 Identity = 124/218 (56.88%), Postives = 146/218 (66.97%), Query Frame = 1
Query: 1 QRSEFAPTEELRTRLENMFREQQETARQVRVEERQRQMEDKLTAEAGAGAGAVVSAGGVDDGAATTADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPVAAVLLALRSLPFATLVGFFSLSALS-SNPQVNKLVRFNMQQAINLDIALIVPGVLGALASVSLGQDAYKLVPLADAGSDVVFLGMLAAVAYSVVTSSTGAFPNKLPLLGRINRE 651
Q SEFAPTEELRTRLE++F +Q+E R R+EERQR+M+DK+ + GA TAWAQP+AAVLLALRS+PFATL+GFFSLS NPQVNKLVRFN QQAIN+DIALI+PGV+GA+A LG DA KL PLA+AGSDVVF+ +LAAVAYSV TS+TG+FPNKLPLLGR+NRE
Sbjct: 126 QLSEFAPTEELRTRLEDLFSQQREDERVARMEERQRRMDDKMRPDTGA-----------------------------------------------VVTAWAQPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAVLGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRE 296
BLAST of mRNA_M-pyrifera_M_contig103320.704.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI) HSP 1 Score: 205 bits (521), Expect = 4.110e-61 Identity = 114/159 (71.70%), Postives = 131/159 (82.39%), Query Frame = 1
Query: 1 QRSEFAPTEELRTRLENMFREQQETARQVRVEERQRQMEDKLTAEAGAGAGAVVSAGGVDDGAATTADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPVAAVLLALRSLPFATLVGFFSLSALSSNPQVNKLVRFNMQQAINLDIALIVPGVLG 477
Q+SEFAPTEELRTRLEN+F +Q+E R R+E D++ +AG VVS G V+DG ATTADKALSALPY+LPL DG+ FA HLFGAF EQTAWAQP+AAVLLALRS+PFATL+GFFSLS SSNPQ+NKLVRFNMQQAINLDIALI+PGV+G
Sbjct: 190 QQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPDAGT---VVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILPGVVG 345
BLAST of mRNA_M-pyrifera_M_contig103320.704.1 vs. uniprot
Match: A0A6H5KKK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK9_9PHAE) HSP 1 Score: 163 bits (412), Expect = 1.870e-47 Identity = 91/126 (72.22%), Postives = 102/126 (80.95%), Query Frame = 1
Query: 1 QRSEFAPTEELRTRLENMFREQQETARQVRVEERQRQMEDKLTAEAGAGAGAVVSAGGVDDGAATTADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPVAAVLLALRSLPFATLVGFFSLS 378
Q+SEFAPTEELRTRLEN+F +Q+E R R+EERQRQM+D + +AGA VVS G V+DG TAD ALSALPYLLPL DGI FA HLFG FPEQTAWAQP+AAVLL LRSL FATL+GFFSLS
Sbjct: 44 QQSEFAPTEELRTRLENLFSQQREEKRLARMEERQRQMDDNMRPDAGA---VVVSPGDVNDGLVNTADNALSALPYLLPLADGIVFAAHLFGVFPEQTAWAQPLAAVLLTLRSLSFATLIGFFSLS 166 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103320.704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103320.704.1 >prot_M-pyrifera_M_contig103320.704.1 ID=prot_M-pyrifera_M_contig103320.704.1|Name=mRNA_M-pyrifera_M_contig103320.704.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp QRSEFAPTEELRTRLENMFREQQETARQVRVEERQRQMEDKLTAEAGAGAback to top mRNA from alignment at M-pyrifera_M_contig103320:3..653- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103320.704.1 ID=mRNA_M-pyrifera_M_contig103320.704.1|Name=mRNA_M-pyrifera_M_contig103320.704.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=651bp|location=Sequence derived from alignment at M-pyrifera_M_contig103320:3..653- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103320:3..653- >mRNA_M-pyrifera_M_contig103320.704.1 ID=mRNA_M-pyrifera_M_contig103320.704.1|Name=mRNA_M-pyrifera_M_contig103320.704.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig103320:3..653- (Macrocystis pyrifera P11B4 male)back to top |