mRNA_M-pyrifera_M_contig1033.698.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1033.698.1 vs. uniprot
Match: D7FK40_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK40_ECTSI) HSP 1 Score: 274 bits (701), Expect = 2.750e-83 Identity = 148/308 (48.05%), Postives = 209/308 (67.86%), Query Frame = 1 Query: 1 GLFKEAQRVLWQALLCTPENQDTFLVVGALGEVLRGSGSKRNAEQVLRGALRQETLPSDVRGEIAFNLAVTLVELAWEEIQTGAGGKRGESRLSQVEAGGEVEELLLGII--NGPVDDSMTFMAMKQLALVMRDRGDEAAAVHWFQKAIATVFILYTILELEPRSPDAMEELGRALSMLGRISEAEQALNQAALADPSLPQPLINAAVLEKNNGDLAGARDLLSRAHKLTGDDGLLVRMALLLSPVVASEGQMVEERARLIQEVNRLTDLQRNGLLSVSTPGSQLEQAPFYLVYAGTNQRPAMEAVAR 918
G F++AQ+ +W+A+LC ++ +L++G LGEVLRGSG+ ++AE+VLR AL+ +LP+ R + FNLAVTL++L E + +R R + EVEELL G++ DS+T A QL L R R D AAAV+W +KA+ ++ ++ + L P P +ELGRAL GR +EA + L QA DP+ P PL+NAA+ +G+L AR+L SRA+ LTGD G+L+RMAL++SPV AS +++EERA ++QEV RLTDLQR G+LSV++PG +LE+APF +VYAG NQR MEA+AR
Sbjct: 150 GYFEQAQQFVWRAVLCAKAGREVYLILGDLGEVLRGSGALQDAERVLRSALQSNSLPTHARRQATFNLAVTLIQLRGETRKPAKATERPHDRRRYDD---EVEELLRGVVADGAGTVDSLTRRATMQLGLFARTRSDSAAAVYWMEKAVRSLQFVFNV-SLNPGCPSTAQELGRALLESGRANEATEVLKQALALDPATPGPLMNAALQRSESGNLVQARELYSRAYDLTGDGGVLIRMALMMSPVAASTERLLEERASVLQEVLRLTDLQRRGMLSVASPGKELERAPFLVVYAGNNQRKTMEAIAR 453
BLAST of mRNA_M-pyrifera_M_contig1033.698.1 vs. uniprot
Match: A0A6H5L3P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P9_9PHAE) HSP 1 Score: 172 bits (435), Expect = 4.430e-45 Identity = 84/130 (64.62%), Postives = 108/130 (83.08%), Query Frame = 1 Query: 1114 EPHGMILEGVVQYLPRPRFHVTICALGGSVSARLETGADRVVRLPLTLDGARLVLEELRLDVLVFADTTCEPVSNLLVLARLAPVQAAFLGTPITSGAPAMDYYISADAIETPDQTTINSPEHEPYTEQV 1503
EPHGM+LEGV+ +LPRPRF VT+CA+GG S+ L GAD VV L T+ GAR+ LEEL+LDVL+FADTTCEPVS+ L L R+AP+QAAF GTPIT+G+P +DY++SADA+E PD+TT+ P+ +PY+EQV
Sbjct: 2 EPHGMLLEGVILHLPRPRFRVTVCAIGGQPSSSLRAGADEVVTLSNTVAGARMALEELKLDVLIFADTTCEPVSHFLALGRVAPIQAAFWGTPITTGSPNIDYFLSADAMEHPDRTTM-LPDDDPYSEQV 130
BLAST of mRNA_M-pyrifera_M_contig1033.698.1 vs. uniprot
Match: D7FK41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK41_ECTSI) HSP 1 Score: 162 bits (411), Expect = 1.410e-41 Identity = 79/126 (62.70%), Postives = 105/126 (83.33%), Query Frame = 1 Query: 1126 MILEGVVQYLPRPRFHVTICALGGSVSARLETGADRVVRLPLTLDGARLVLEELRLDVLVFADTTCEPVSNLLVLARLAPVQAAFLGTPITSGAPAMDYYISADAIETPDQTTINSPEHEPYTEQV 1503
M+LEGV+ +LPRPRF +T+CA+GG S+ L TGAD+VV L T+ GAR+ LEEL+LDVL+FADTTCEPVS+ L L R+AP+QAAF GTPIT+G+P +DY++SAD +E PD+TT+ P+ +PY+EQV
Sbjct: 1 MLLEGVILHLPRPRFRITVCAIGGQPSSSLRTGADKVVTLSNTVAGARIALEELKLDVLIFADTTCEPVSHFLALGRVAPIQAAFWGTPITTGSPNIDYFLSADVMEHPDRTTM-LPDDDPYSEQV 125
BLAST of mRNA_M-pyrifera_M_contig1033.698.1 vs. uniprot
Match: A0A7S3K5W7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K5W7_9STRA) HSP 1 Score: 166 bits (419), Expect = 3.590e-40 Identity = 132/395 (33.42%), Postives = 183/395 (46.33%), Query Frame = 1 Query: 364 AMKQLALVMRDRGDEAAAVHWFQKAIATVFILYTILELEPRSPDAMEELGRALSMLGRISEAEQALNQAALADPSLPQPLINAAVLEKNNGDLAGARDLLSRAHKLTGDD-------GLLVRMALLLSPVVASEGQMVEERARLIQEVNRLTD---LQRNGLLSVSTPGSQLEQAPFYLVYAGTNQRPAMEAVARMQASIAPGLLAAAKHLVGGTRFTSSGSGKTDTAVAVDDNNDDDVGGSELARPLHVGFISKLFGEQEPHGMILEGVVQYLPRPRFHVTICALGG----SVSARLETGADRVVRLPLTLDGARLVLEELRLDVLVFADTTCEPVSNLLVLARLAPVQAAFLGTPITSG-APAMDYYISADAIETPDQTTINSPEHEPYTEQV 1503
A LA V +RG A+ ++KA+A P A+ LG AL + R ++A L D PQ L N A N G+ AR RA + + GLL+R +++P+ + M ERA V L L++ L P S +EQ FYL YAG N R EA++ + + P L S T ++ + N + VGF+SK FGE EPHG++LEGVVQ+LPR F V + + + S L AD + L L R + E RLDVL++AD EP++ L ARLAP+Q F G P+TSG +DYYISAD +E P++T + P EPY+EQ+
Sbjct: 244 ARVNLASVFHERGQIDEAIQGYEKALAVA----------PNDTQALNNLGAALITVSRHNDAVLVLEHCLTLDAFQPQALTNLATHYANEGEQELARSYFIRARAVAKPEADGKYNAGLLMRELTMMAPMSHNTSHMYWERADFALRVLTLRHALMLKKIHLFLPPDPVSSVEQVQFYLPYAGLNDRFLQEALSDIYRRLCPEL-----------------SWLGYTTISTEPNK------------IRVGFVSKFFGEHEPHGLLLEGVVQHLPRRLFQVIVLPIASPGRPAASKLLAQVADELTPLGLNFLHTRRTIAEARLDVLIYADMLSEPMTYFLGFARLAPIQMLFWGNPVTSGRGMEIDYYISADIMEAPERTKL-PPSLEPYSEQL 598
BLAST of mRNA_M-pyrifera_M_contig1033.698.1 vs. uniprot
Match: A0A6S8RMR4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8RMR4_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.810e-36 Identity = 123/373 (32.98%), Postives = 171/373 (45.84%), Query Frame = 1 Query: 379 ALVMRDRGDEAAAVHWFQKAIATVFI--LYTILELEPRSPDAMEELGRALSMLGRISEAEQALNQAALADPSLPQPLINAAVLEKNNGDLAGARDLLSRAHKL------TGDDGLLVRMALLLSPVVASEGQMVEERARLIQEVNRLTDLQRNGLLSVSTPGSQLEQAPFYLVYAGTNQRPAMEAVARMQASIAPGLLAAAKHLVGGTRFTSSGSGKTDTAVAVDDNNDDDVGGSELARPLHVGFISKLFGEQEPHGMILEGVVQYLPRPRFHVTICALGG----SVSARLETGADRVVRLPLTLDGARLVLEELRLDVLVFADTTCEPVSNLLVLARLAPVQAAFLGTPITSGAPAMDYYISADAIETPDQT 1461
A V++ R + AA H ++ ++ + I +L LEP A+ LG AL +GR +A + L N G L A L +RA KL GL R A + P+V M R + V L L + L + P ++E FYL Y G + RP EAVAR + P L L + V V R +GF+SKLF E EPHG++LEGVVQ+LPR RF V + + + S L + AD ++ L L + RL L + +LDVLVFAD EP+S L +R APVQ F G P+T+G ++DY++SAD +E P +T
Sbjct: 297 AFVLQARVNRAAIDH--ERGLSELAIEGYEAVLRLEPEHAQALNNLGAALVTVGRHDDAVKVLXXXXXXXXXXXXXXXXXXAHWANEGYLERASLLNNRAIKLYLQRDPRRAAGLFAREAFAIRPIVEDAAAMYAARLDFARRVASLEWLLQRRTLIIDDPVVEVEHVHFYLPYPGLDDRPLQEAVARCYERMIPQLAGPVPGL-------------SPEPVRV--------------RRARIGFLSKLFAEHEPHGLLLEGVVQHLPRDRFVVVVLPVASPGRDAASELLRSSADELIELGLNMRENRLTLIKAKLDVLVFADMLSEPMSYFLGFSRFAPVQVCFWGNPLTTGRSSIDYFVSADRMEHPYRT 640
BLAST of mRNA_M-pyrifera_M_contig1033.698.1 vs. uniprot
Match: A0A7S3ZLD0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZLD0_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.080e-36 Identity = 123/373 (32.98%), Postives = 171/373 (45.84%), Query Frame = 1 Query: 379 ALVMRDRGDEAAAVHWFQKAIATVFI--LYTILELEPRSPDAMEELGRALSMLGRISEAEQALNQAALADPSLPQPLINAAVLEKNNGDLAGARDLLSRAHKL------TGDDGLLVRMALLLSPVVASEGQMVEERARLIQEVNRLTDLQRNGLLSVSTPGSQLEQAPFYLVYAGTNQRPAMEAVARMQASIAPGLLAAAKHLVGGTRFTSSGSGKTDTAVAVDDNNDDDVGGSELARPLHVGFISKLFGEQEPHGMILEGVVQYLPRPRFHVTICALGG----SVSARLETGADRVVRLPLTLDGARLVLEELRLDVLVFADTTCEPVSNLLVLARLAPVQAAFLGTPITSGAPAMDYYISADAIETPDQT 1461
A V++ R + AA H ++ ++ + I +L LEP A+ LG AL +GR +A + L N G L A L +RA KL GL R A + P+V M R + V L L + L + P ++E FYL Y G + RP EAVAR + P L L + V V R +GF+SKLF E EPHG++LEGVVQ+LPR RF V + + + S L + AD ++ L L + RL L + +LDVLVFAD EP+S L +R APVQ F G P+T+G ++DY++SAD +E P +T
Sbjct: 297 AFVLQARVNRAAIDH--ERGLSELAIEGYEAVLRLEPEHAQALNNLGAALVTVGRHDDAVKVLXXXXXXXXXXXXXXXXXXAHWANEGYLERASLLNNRAIKLYLQRDPRRAAGLFAREAFAIRPIVEDAAAMYAARLDFARRVASLEWLLQRRTLIIDDPVVEVEHVHFYLPYPGLDDRPLQEAVARCYERMIPQLAGPVPGL-------------SPEPVRV--------------RRARIGFLSKLFAEHEPHGLLLEGVVQHLPRDRFVVVVLPVASPGRDAASELLRSSADELIELGLNMRENRLTLIKAKLDVLVFADMLSEPMSYFLGFSRFAPVQVCFWGNPLTTGRSSIDYFVSADRMEHPYRT 640
BLAST of mRNA_M-pyrifera_M_contig1033.698.1 vs. uniprot
Match: A0A485KTM2_9STRA (Aste57867_11675 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTM2_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.680e-31 Identity = 104/299 (34.78%), Postives = 147/299 (49.16%), Query Frame = 1 Query: 559 LNQAALADPSLPQPLINAAVLEKNNGDLAGARDLLSRAHKLTGDDGLLVRMALLLSPVVASEGQMVEERARLIQEVNRLTDLQRNGLLSVSTPGSQLEQAPFYLVYAGTNQRPAMEAVARMQASIAPGLLAAAKHLVGGTRFTSSGSGKTDTAVAVDDNNDDDVGGSELARPLHVGFISKLFGEQEPHGMILEGVVQYLPRPRFHVTICALGG---SVSARLETGADRVVRLPLTLDGARLVLEELRLDVLVFADTTCEPVSNLLVLARLAPVQAAFLGTPITSGAPAMDYYISADAIE 1446
L A +P+LP +N + G+LA AR LL +A+ ++ D L + +A LL V S +V+ R L ++ L + L+V P + PF LVY G N R + +AR+ A P LL A H+ G + A D R L +GF+SK F + HG++L GV+ +L R F VT+ + SV + D V L + L + + L+LDVLVFAD EP++ ARLA VQAAF G P TSG P++DY+ISADA+E
Sbjct: 309 LEAAIRLNPTLPHGYVNLKTYYADEGNLAMARTLLEQAYNVSHADVLRIDLATLLPQVYTSHDHLVQTRRDLEASLDTLLEEP----LTVDNPEEFEIRPPFLLVYQGMNDRAILTTLARIHARACPSLLFTAPHVHAGLG----------SLAAFD----------ATPRRLRIGFMSKFFVDNHAHGLLLRGVLAHLDRNVFDVTLLVVPDPQQSVDPAMAAAVDDVHVLSMHLFHIQHDIAALQLDVLVFADIMSEPINYYAAFARLAHVQAAFWGNPTTSGIPSIDYFISADAME 583
BLAST of mRNA_M-pyrifera_M_contig1033.698.1 vs. uniprot
Match: UPI0013A5EF9F (glycosyltransferase family 41 protein n=1 Tax=Geomonas edaphica TaxID=2570226 RepID=UPI0013A5EF9F) HSP 1 Score: 135 bits (340), Expect = 2.380e-30 Identity = 114/386 (29.53%), Postives = 166/386 (43.01%), Query Frame = 1 Query: 301 EVEELLLGIINGPVDDSMTFMAMKQLALVMRDRGDEAAAVHWFQKAIATVFILYTILELEPRSPDAMEELGRALSMLGRISEAEQALNQAALADPSLPQPLINAAVLEKNNGDLAGARDLLSRAHKLTGDDGLLVRMALLLSPVVASEGQMVEERARLIQEVNRLTDLQRNGLLSVSTPGSQLEQAPFYLVYAGTNQRPAMEAVARMQASIAPGLLAAAKHLVGGTRFTSSGSGKTDTAVAVDDNNDDDVGGSELARPLHVGFISKLFGEQEPHGMILEGVVQYLPRPRFHVTICA---LGGSVSARLETGADRVVRLPLTLDGARLVLEELRLDVLVFADTTCEPVSNLLVLARLAPVQAAFLGTPITSGAPAMDYYISADAIET 1449
E EE L + D + A +M+D G +A AV W+QKA L+L + L AL +G S A + +A DP+ +N + G + RA L V+ A++ VV+S ++ E R R++ E+ L G+ + P ++ PFYL YAG + P M +A A P LL A H V G R +G P VGF+S F + G V++ L R FHVT + + +VSA + G D + +P L A+ +EE LD L+F D EP++ L ARLAPVQ A G P+T+G P +DY++S + ET
Sbjct: 86 EAEEALSAAVAA---DPRHWGACYTYGFLMQDLGRDAEAVPWYQKA----------LQLREDHAKSHNNLASALLAVGETSRAFVHVKRAVELDPNYTFAYMNLGTMYNLEGRYRESLAAFERAATLGAPPTCRVKHAVIFPAVVSSVAEIDEGRTRMVSELRALA---AEGI-RLHDPVREVGITPFYLAYAGMDDLPLMRELAAFYAGACPQLLRVAPHCVAGGRKRGAG------------------------EPARVGFVSTFFYDHTV-GRYFGEVMRRLSREWFHVTAISNFTVDDTVSASIREGVDECIVIPNNLAAAQQAIEEAALDALIFCDIGMEPLTYFLAFARLAPVQIALYGHPVTTGIPNVDYFLSHEDCET 429
BLAST of mRNA_M-pyrifera_M_contig1033.698.1 vs. uniprot
Match: A0A024UQX4_9STRA (Protein O-GlcNAc transferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQX4_9STRA) HSP 1 Score: 130 bits (326), Expect = 2.300e-28 Identity = 101/295 (34.24%), Postives = 148/295 (50.17%), Query Frame = 1 Query: 628 NNGDLAGARDLLSRAHKLTGDDGLLVRMALLLSPVVASEGQMVEERARLIQEVNRLTDLQRNGLLSVSTPGSQLEQAPFYLVYAGTNQRPAMEAVARMQASIAPGLLAAAKHLVGGTRFTSSGSGKTDTAVAVDDNNDDDVGGSELARPLHVGFISKLFGEQEPHGMILEGVVQYLPRPRFHVTICALGGS---VSARLETGADRVVRLPLTLDGARLVLEELRLDVLVFADTTCEPVSNLLVLARLAPVQAAFLGTPITSGAPAMDYYISADAIETPDQTTINSPEHEPYTEQV 1503
++G+L+ AR +L A+ ++ D LL+ +A LL V S+ + R ++++ D L V P + + PFYLVY G N +A++ ++ L A H T G G + +A D R LHVGF+SK F HGM+L GV+Q+L R FHVT+ + V + + AD + L + L + L L+LDVLVFAD EP++ RLA VQAAF G P TSG P +DY+ISAD +E+ +++ H Y+EQV
Sbjct: 313 DSGNLSMARQMLQHAYNVSNADVLLIDLATLLPQVYTSQEHLDSTR----KDMHAALDALLAASLDVENPEAFEMRPPFYLVYQGRNDVDLQTKLAKVHSNSCAALHFEAPH-------TRVGVG---SLIAFD----------STPRRLHVGFMSKFFVSNHAHGMLLRGVLQHLNRKLFHVTLVVVPDPQQPVDSAMAAAADDIKVLSMHLAHCQQDLAALQLDVLVFADLMSEPMTYFSAFGRLAHVQAAFWGNPTTSGIPTVDYFISADVMESSPDPAVDA--H--YSEQV 579
BLAST of mRNA_M-pyrifera_M_contig1033.698.1 vs. uniprot
Match: A0A4P7YWZ0_9PROT (Uncharacterized protein n=2 Tax=Azospirillum sp. TSA2s TaxID=709810 RepID=A0A4P7YWZ0_9PROT) HSP 1 Score: 127 bits (318), Expect = 1.660e-27 Identity = 102/332 (30.72%), Postives = 151/332 (45.48%), Query Frame = 1 Query: 469 LELEPRSPDAMEELGRALSMLGRISEAEQALNQAALADPSLPQPLINAAVLEKNNGDLAGARDLLSRAHKLTGDDGLLVRMALLLSPVVASEGQMVEERARLIQEVNRLTDLQRNGLLSVSTPGSQLEQAPFYLVYAGTNQRPAMEAVARMQASIAPGLLAAAKHLVGGTRFTSSGSGKTDTAVAVDDNNDDDVGGSELARPLHVGFISKLFGEQEPHGMILEGVVQYLPRPRFHVTICALGG---SVSARLETGADRVVRLPLTLDGARLVLEELRLDVLVFADTTCEPVSNLLVLARLAPVQAAFLGTPITSGAPAMDYYISADAIETPD 1455
L L P ++ LG L LG EA L A P + A+L++ G LA AR RA +L G DGLL+R AL L + S ++ E RAR + L L ++ P ++ F+L Y G + R +AR+ P LL A H R + + + + A R L +GF+S F GM+ +G+V+ L R RF V + G + L+ AD+ + +P TL+ AR ++ + RLD+L + D P + L ARLAP+Q G P T+G P +D ++S DA+E D
Sbjct: 112 LRLRPGDGRLLDGLGTCLGELGHSDEALGLLRYRAALTPEVGDVYRKIAILQQRTGRLAEARQAYRRAWRLGGGDGLLLREALSLPVIPRSLAEIQESRARCAAVLEEARGLG----LRIADPLREVGVTSFFLSYHGLDDRGLNVELARLYRQACPSLLYTAPHC----REPDASARRQEMA----------------GRRLRIGFVSDHF-HAHTIGMLNQGLVERLSRDRFEVVLFFTPGPEDDLRRHLKAVADQAIDVPATLEEARRIIADARLDILYYTDIGMSPFTYFLAFARLAPLQCLSWGHPDTTGIPTLDLFLSCDAMEPED 418 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1033.698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1033.698.1 >prot_M-pyrifera_M_contig1033.698.1 ID=prot_M-pyrifera_M_contig1033.698.1|Name=mRNA_M-pyrifera_M_contig1033.698.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=501bp GLFKEAQRVLWQALLCTPENQDTFLVVGALGEVLRGSGSKRNAEQVLRGAback to top mRNA from alignment at M-pyrifera_M_contig1033:412..27292- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1033.698.1 ID=mRNA_M-pyrifera_M_contig1033.698.1|Name=mRNA_M-pyrifera_M_contig1033.698.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=26881bp|location=Sequence derived from alignment at M-pyrifera_M_contig1033:412..27292- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1033:412..27292- >mRNA_M-pyrifera_M_contig1033.698.1 ID=mRNA_M-pyrifera_M_contig1033.698.1|Name=mRNA_M-pyrifera_M_contig1033.698.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3006bp|location=Sequence derived from alignment at M-pyrifera_M_contig1033:412..27292- (Macrocystis pyrifera P11B4 male)back to top |