mRNA_M-pyrifera_M_contig103185.674.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103185.674.1 vs. uniprot
Match: A0A2E7KMU4_9PLAN (Dehydrogenase (Fragment) n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KMU4_9PLAN) HSP 1 Score: 419 bits (1078), Expect = 1.590e-141 Identity = 209/217 (96.31%), Postives = 213/217 (98.16%), Query Frame = 1 Query: 1 RLFLLLTILASGSLYVVSQAXXXXXXXXXTGGEFFSPADSLKQFTVPEDLKLEQVLAEPNVKQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDTDGDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 651 RLFLLLTILASGSLYVVS A XXXXXXXTGGEFFSPADSLKQFTVP+DLKLEQVLAEP V+QPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDT+GDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFG+EDTHSVVNSLRWGPDGWLYSSQGSTVSGKV Sbjct: 4 RLFLLLTILASGSLYVVSHAAPXXXXXXXTGGEFFSPADSLKQFTVPDDLKLEQVLAEPLVRQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDTNGDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFGMEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 220
BLAST of mRNA_M-pyrifera_M_contig103185.674.1 vs. uniprot
Match: A0A517ZZQ7_9PLAN (Cytochrome c n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517ZZQ7_9PLAN) HSP 1 Score: 410 bits (1054), Expect = 2.420e-134 Identity = 195/217 (89.86%), Postives = 204/217 (94.01%), Query Frame = 1 Query: 1 RLFLLLTILASGSLYVVSQAXXXXXXXXXTGGEFFSPADSLKQFTVPEDLKLEQVLAEPNVKQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDTDGDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 651 RLFLLLTILASGSLY +SQA TGGEFFSPADSLKQFTVPEDLK+EQVL EP ++QPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHG+KGDD+ITIHEDT+GDGKYDKHSVF+D LNIASSFVKGRGGVWVLNPPYLLFYPDK+NDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV Sbjct: 4 RLFLLLTILASGSLYAISQAAPLTPPPKNTGGEFFSPADSLKQFTVPEDLKIEQVLTEPIIRQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGEKGDDKITIHEDTNGDGKYDKHSVFIDGLNIASSFVKGRGGVWVLNPPYLLFYPDKDNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 220
BLAST of mRNA_M-pyrifera_M_contig103185.674.1 vs. uniprot
Match: A0A517R8G8_9PLAN (Cytochrome c n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517R8G8_9PLAN) HSP 1 Score: 379 bits (974), Expect = 1.670e-122 Identity = 180/217 (82.95%), Postives = 195/217 (89.86%), Query Frame = 1 Query: 1 RLFLLLTILASGSLYVVSQAXXXXXXXXXTGGEFFSPADSLKQFTVPEDLKLEQVLAEPNVKQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDTDGDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 651 RLFLL TI + S +++Q+ TGGEFF+PADSLKQFTVPEDLK+EQVLAEP VKQPIF NFDERGRMWVINYLQYPYPEGLRILSKDKHHR+VYDKVPLPPPH +KG D+ITIHEDT+GDGKYDKH F+D LNIASSFVKGRGGVWVLNPPYLLFYPD++NDDVPDGDPVVHLEGFG+EDTHSVVNSLRWGPDGWLYSSQGSTVSGKV Sbjct: 4 RLFLLATITITLSSLIIAQSAPPVPPPKNTGGEFFNPADSLKQFTVPEDLKIEQVLAEPFVKQPIFQNFDERGRMWVINYLQYPYPEGLRILSKDKHHRSVYDKVPLPPPHHEKGADKITIHEDTNGDGKYDKHKTFVDGLNIASSFVKGRGGVWVLNPPYLLFYPDQDNDDVPDGDPVVHLEGFGMEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 220
BLAST of mRNA_M-pyrifera_M_contig103185.674.1 vs. uniprot
Match: A0A517X3E2_9PLAN (Cytochrome c n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X3E2_9PLAN) HSP 1 Score: 372 bits (956), Expect = 7.560e-120 Identity = 178/217 (82.03%), Postives = 189/217 (87.10%), Query Frame = 1 Query: 1 RLFLLLTILASGSLYVVSQAXXXXXXXXXTGGEFFSPADSLKQFTVPEDLKLEQVLAEPNVKQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDTDGDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 651 RL LLTI + + +SQA GGEFF PADSLK+FTVP+DLK+EQVLAEP VKQPIF NFDERGRMWVINYLQYPYPEGLR+LSKDKH RAVYDKVPLPPPH ++G D+ITIHEDTDGDGKYDKH F+D LNIASSFVKGRGGVWVLNPPYLLFYPD NNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV Sbjct: 4 RLLFLLTISQIITTFTISQAAPPVPPSNNKGGEFFDPADSLKKFTVPQDLKIEQVLAEPYVKQPIFQNFDERGRMWVINYLQYPYPEGLRVLSKDKHLRAVYDKVPLPPPHHERGADKITIHEDTDGDGKYDKHKTFIDGLNIASSFVKGRGGVWVLNPPYLLFYPDHNNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 220
BLAST of mRNA_M-pyrifera_M_contig103185.674.1 vs. uniprot
Match: A6C8D3_9PLAN (Cytochrome c domain-containing protein n=9 Tax=Planctomycetaceae TaxID=126 RepID=A6C8D3_9PLAN) HSP 1 Score: 370 bits (950), Expect = 5.910e-119 Identity = 189/218 (86.70%), Postives = 200/218 (91.74%), Query Frame = 1 Query: 1 RLFLLLTILASG-SLYVVSQAXXXXXXXXXTGGEFFSPADSLKQFTVPEDLKLEQVLAEPNVKQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDTDGDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 651 RL +LLT+LA+ S XXXXXXXXXTGGEFFSPADSLKQFTVP+DLK+EQVLAEP VKQPIF NFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDK+PLPPPH +KG D+ITIHEDT+GDGKYDKH F+D LNIASSFVKGRGGVWVLNPPYLLFYPDK+NDDVPDGDPVVHLEGFGLEDTHSVVNSLR GPDGWLYSSQGSTVSGKV Sbjct: 4 RLLILLTVLAASYSESXXXXXXXXXXXXXXTGGEFFSPADSLKQFTVPDDLKIEQVLAEPEVKQPIFQNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKIPLPPPHHEKGADKITIHEDTNGDGKYDKHKTFVDGLNIASSFVKGRGGVWVLNPPYLLFYPDKDNDDVPDGDPVVHLEGFGLEDTHSVVNSLRLGPDGWLYSSQGSTVSGKV 221
BLAST of mRNA_M-pyrifera_M_contig103185.674.1 vs. uniprot
Match: A0A3C0VW06_9BACT (Dehydrogenase (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3C0VW06_9BACT) HSP 1 Score: 294 bits (753), Expect = 2.940e-97 Identity = 134/181 (74.03%), Postives = 156/181 (86.19%), Query Frame = 1 Query: 109 PADSLKQFTVPEDLKLEQVLAEPNVKQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDTDGDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 651 PA+SLKQ V +DL+L+Q+LAEP VKQP+FLNFDERGRMWV+ Y QYP+P GLR+ S+D + RAVYDKVP PPP+ +G D+ITIHEDTDGDG +D+H F+D LNIA+S GRGGVWVLNPPYLLFY DKN DD+PDGDPVVHL GFGLEDTHSVVNSLRWGPDGWLY++QGSTV+ KV Sbjct: 24 PAESLKQLEVFDDLELDQLLAEPLVKQPVFLNFDERGRMWVVQYQQYPHPAGLRMTSRDNYWRAVYDKVPPPPPNHIRGRDKITIHEDTDGDGVFDRHKTFVDGLNIATSLAHGRGGVWVLNPPYLLFYADKNRDDIPDGDPVVHLAGFGLEDTHSVVNSLRWGPDGWLYAAQGSTVTAKV 204
BLAST of mRNA_M-pyrifera_M_contig103185.674.1 vs. uniprot
Match: A0A3C0DTS8_9BACT (Dehydrogenase (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A3C0DTS8_9BACT) HSP 1 Score: 298 bits (763), Expect = 1.020e-94 Identity = 136/182 (74.73%), Postives = 158/182 (86.81%), Query Frame = 1 Query: 106 SPADSLKQFTVPEDLKLEQVLAEPNVKQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDTDGDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 651 SPA+SL +F+V EDL+++QVLAEP VKQP+FLNFDERGRMWV+ Y QYP+P GL++ S+D + RAVYDKVP PPP+ +G D+ITIHEDTDGDG YD H F+D LNIA+S GRGGVWVLNPPYLLFYPDKN DD+PDGDPVVHL GFGLEDTHSVVNSLRWGPDGWLY++QGSTV+ KV Sbjct: 23 SPAESLDKFSVFEDLEIDQVLAEPLVKQPVFLNFDERGRMWVVQYQQYPHPAGLKMTSRDNYWRAVYDKVPPPPPNHIRGRDKITIHEDTDGDGVYDWHKTFVDGLNIATSLAHGRGGVWVLNPPYLLFYPDKNRDDIPDGDPVVHLAGFGLEDTHSVVNSLRWGPDGWLYAAQGSTVTAKV 204
BLAST of mRNA_M-pyrifera_M_contig103185.674.1 vs. uniprot
Match: A0A2E3A1H4_9BACT (Dehydrogenase (Fragment) n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2E3A1H4_9BACT) HSP 1 Score: 297 bits (761), Expect = 8.030e-94 Identity = 132/182 (72.53%), Postives = 159/182 (87.36%), Query Frame = 1 Query: 106 SPADSLKQFTVPEDLKLEQVLAEPNVKQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDTDGDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 651 SP +SLK+F + EDL+++Q+LAEP VKQP+FLNFDERGRMWV+ YLQYP+P GL++ S+D + RAVYDK+P PPP+ +G D+ITIHED+DGDG YD+H F+D LNIA+S GRGGVWVLNPPYLLFYPD+N DD+PDGDPVVHL GFGLEDTHSVVNSLRWGPDGWLY++QGSTV+ KV Sbjct: 23 SPEESLKKFEIFEDLEVDQLLAEPLVKQPVFLNFDERGRMWVVQYLQYPHPAGLKMTSRDNYWRAVYDKIPPPPPNHIRGRDKITIHEDSDGDGLYDRHKTFIDGLNIATSLAHGRGGVWVLNPPYLLFYPDENRDDIPDGDPVVHLSGFGLEDTHSVVNSLRWGPDGWLYAAQGSTVTAKV 204
BLAST of mRNA_M-pyrifera_M_contig103185.674.1 vs. uniprot
Match: A0A381VVX7_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381VVX7_9ZZZZ) HSP 1 Score: 291 bits (745), Expect = 1.800e-93 Identity = 132/182 (72.53%), Postives = 155/182 (85.16%), Query Frame = 1 Query: 106 SPADSLKQFTVPEDLKLEQVLAEPNVKQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDTDGDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 651 SPA+S K+FTV +DL+++Q+LAEP VKQP+FLNFDERGRMWV+ Y QYP P GL++ S+D + RAVYDKVP PP+ +G D+ITIHEDTDGDG +DKH FLD LNI +S GRGGVWVLNPPYLLFYPDKN DD+PD DP+VHL GFGLEDTHSVVNSLRWGPDGWLY++QGSTV+ KV Sbjct: 34 SPAESFKKFTVFDDLEIDQLLAEPLVKQPVFLNFDERGRMWVVQYQQYPSPAGLKMTSRDNYWRAVYDKVPPAPPNHIRGRDKITIHEDTDGDGVFDKHKTFLDGLNIVTSLAHGRGGVWVLNPPYLLFYPDKNRDDIPDSDPMVHLAGFGLEDTHSVVNSLRWGPDGWLYAAQGSTVTAKV 215
BLAST of mRNA_M-pyrifera_M_contig103185.674.1 vs. uniprot
Match: A0A3D1DK07_9PLAN (Dehydrogenase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D1DK07_9PLAN) HSP 1 Score: 293 bits (751), Expect = 2.410e-93 Identity = 132/182 (72.53%), Postives = 159/182 (87.36%), Query Frame = 1 Query: 106 SPADSLKQFTVPEDLKLEQVLAEPNVKQPIFLNFDERGRMWVINYLQYPYPEGLRILSKDKHHRAVYDKVPLPPPHGDKGDDQITIHEDTDGDGKYDKHSVFLDDLNIASSFVKGRGGVWVLNPPYLLFYPDKNNDDVPDGDPVVHLEGFGLEDTHSVVNSLRWGPDGWLYSSQGSTVSGKV 651 +PA++LK F V +DLKLEQVLAEP V QP+F+N+DERGR+WV+NY QYP P GL+++S+DK+ RAVYDKVPLPPPHG +G D+ITIHEDTDGDG DKH F+D LNIASSF +GRGGV+VLNPPYLLFYPD+N+DD+PD DP+V LEGFGLED+HSV NSLRWGPDGWLY+ QGST +G + Sbjct: 215 APAEALKSFQVAKDLKLEQVLAEPLVGQPLFINWDERGRLWVLNYKQYPDPAGLKMVSRDKYLRAVYDKVPLPPPHGARGRDKITIHEDTDGDGVLDKHKTFVDGLNIASSFARGRGGVFVLNPPYLLFYPDQNDDDIPDSDPIVLLEGFGLEDSHSVANSLRWGPDGWLYACQGSTTTGHI 396 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103185.674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103185.674.1 >prot_M-pyrifera_M_contig103185.674.1 ID=prot_M-pyrifera_M_contig103185.674.1|Name=mRNA_M-pyrifera_M_contig103185.674.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp RLFLLLTILASGSLYVVSQAAPPTPPPNNTGGEFFSPADSLKQFTVPEDLback to top mRNA from alignment at M-pyrifera_M_contig103185:3..653+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103185.674.1 ID=mRNA_M-pyrifera_M_contig103185.674.1|Name=mRNA_M-pyrifera_M_contig103185.674.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=651bp|location=Sequence derived from alignment at M-pyrifera_M_contig103185:3..653+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103185:3..653+ >mRNA_M-pyrifera_M_contig103185.674.1 ID=mRNA_M-pyrifera_M_contig103185.674.1|Name=mRNA_M-pyrifera_M_contig103185.674.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig103185:3..653+ (Macrocystis pyrifera P11B4 male)back to top |