mRNA_M-pyrifera_M_contig103175.671.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103175.671.1 vs. uniprot
Match: A0A835YML9_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YML9_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 9.550e-9 Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 1 Query: 16 FVCIRLFDPRRIGVASSLCLNGNVIPGVKLQPHESHVGYVLQFMMDHGLAGME 174 F+ + L++PR +G +SL L V+ G KLQP ESH+ Y+LQ +DHGLAG E Sbjct: 19 FLRVELYNPRAVGEVASL-LQAGVVLGQKLQPFESHISYLLQAFVDHGLAGYE 70
BLAST of mRNA_M-pyrifera_M_contig103175.671.1 vs. uniprot
Match: A0A139AZL3_GONPJ (Uncharacterized protein (Fragment) n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AZL3_GONPJ) HSP 1 Score: 57.4 bits (137), Expect = 1.650e-7 Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 1 Query: 1 SSSSPFVCIRLFDPRRIGVASSLCLNGNVIPGVKLQPHESHVGYVLQFMMDHGLAGMELCKIVNPRWRT 207 SS PF+ + DP A+ L +G ++ G LQPHESH+ Y+LQF++DH L GM+ + N +RT Sbjct: 150 SSYRPFLKLSFIDPFACSRAADLLASGAIM-GRPLQPHESHIPYLLQFLLDHNLFGMDFIHLRNVLFRT 217
BLAST of mRNA_M-pyrifera_M_contig103175.671.1 vs. uniprot
Match: E0VD89_PEDHC (DNA polymerase zeta catalytic subunit n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0VD89_PEDHC) HSP 1 Score: 56.2 bits (134), Expect = 4.380e-7 Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 1 Query: 1 SSSSPFVCIRLFDPRRIGVASSLCLNGNVIPGVKLQPHESHVGYVLQFMMDHGLAGMELCKIVNPRWR 204 +S F I L++P I AS L L G ++ G KLQPHESH+ Y LQFMMD+ + GM ++R Sbjct: 113 ASHHQFFKIFLYNPFYIKKASDLLLKGAIL-GQKLQPHESHIPYTLQFMMDYNIYGMSFVNFSKVKYR 179
BLAST of mRNA_M-pyrifera_M_contig103175.671.1 vs. uniprot
Match: A0A6J1KIG8_CUCMA (DNA polymerase zeta catalytic subunit n=2 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KIG8_CUCMA) HSP 1 Score: 55.8 bits (133), Expect = 5.980e-7 Identity = 30/72 (41.67%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 1 SSSSPFVCIRLFDPRRIGVASSLCLNGNVIPGVKLQPHESHVGYVLQFMMDHGLAGMELCKIVNPRWRTTFP 216 SS F+ I L+ P+ I A++L LNG V+ + LQP+ESH+ +VLQF++D+ L GM L ++ ++R P Sbjct: 129 SSEELFLKIYLYHPQDITRAANLLLNGAVLEKI-LQPYESHIPFVLQFLVDYNLYGMGLLHLMKLKFRHPVP 199
BLAST of mRNA_M-pyrifera_M_contig103175.671.1 vs. uniprot
Match: A0A6P8EKA9_PUNGR (DNA polymerase zeta catalytic subunit n=2 Tax=Punica granatum TaxID=22663 RepID=A0A6P8EKA9_PUNGR) HSP 1 Score: 55.8 bits (133), Expect = 5.990e-7 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 1 SSSSPFVCIRLFDPRRIGVASSLCLNGNVIPGVKLQPHESHVGYVLQFMMDHGLAGMELCKIVNPRWRTTFPPSIAASL 237 +S FV I L++P I A+ L L G V LQPHESH+ Y+LQF++D+ L GM + ++R P S ++ L Sbjct: 134 ASEELFVKIYLYNPHDIARAAKLLLAGAVFDR-SLQPHESHIPYLLQFLVDYNLYGMGHLHVTKMKFRNPIPVSFSSKL 211
BLAST of mRNA_M-pyrifera_M_contig103175.671.1 vs. uniprot
Match: A0A1S3BYN1_CUCME (DNA polymerase zeta catalytic subunit-like isoform X1 n=2 Tax=Cucumis melo TaxID=3656 RepID=A0A1S3BYN1_CUCME) HSP 1 Score: 55.5 bits (132), Expect = 7.800e-7 Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 1 SSSSPFVCIRLFDPRRIGVASSLCLNGNVIPGVKLQPHESHVGYVLQFMMDHGLAGMELCKIVNPRWRTTFP 216 SS F+ I L+ P+ I A++L LNG V+ LQP+ESH+ +VLQF++D+ L GM L +V ++R P Sbjct: 129 SSEELFMKIYLYYPQDITRAANLLLNGAVLEK-SLQPYESHIPFVLQFLVDYNLYGMGLLHLVKLKFRLPVP 199
BLAST of mRNA_M-pyrifera_M_contig103175.671.1 vs. uniprot
Match: A0A166GNC6_DAUCS (DNA polymerase n=4 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166GNC6_DAUCS) HSP 1 Score: 55.5 bits (132), Expect = 8.120e-7 Identity = 29/72 (40.28%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 1 SSSSPFVCIRLFDPRRIGVASSLCLNGNVIPGVKLQPHESHVGYVLQFMMDHGLAGMELCKIVNPRWRTTFP 216 SS FV I L+ P+ + A++L + G ++ V LQPHESH+ ++LQF++DH L GM + ++RT P Sbjct: 128 SSEEFFVKIFLYYPQDVSRAANLLVGGAILDKV-LQPHESHIPFLLQFLIDHNLYGMGHLHVSKMKFRTPVP 198
BLAST of mRNA_M-pyrifera_M_contig103175.671.1 vs. uniprot
Match: A0A5D3CRJ8_CUCME (DNA polymerase n=2 Tax=Cucumis TaxID=3655 RepID=A0A5D3CRJ8_CUCME) HSP 1 Score: 55.5 bits (132), Expect = 8.120e-7 Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 1 SSSSPFVCIRLFDPRRIGVASSLCLNGNVIPGVKLQPHESHVGYVLQFMMDHGLAGMELCKIVNPRWRTTFP 216 SS F+ I L+ P+ I A++L LNG V+ LQP+ESH+ +VLQF++D+ L GM L +V ++R P Sbjct: 129 SSEELFMKIYLYYPQDITRAANLLLNGAVLEK-SLQPYESHIPFVLQFLVDYNLYGMGLLHLVKLKFRLPVP 199
BLAST of mRNA_M-pyrifera_M_contig103175.671.1 vs. uniprot
Match: A0A6J1G355_CUCMO (DNA polymerase zeta catalytic subunit n=1 Tax=Cucurbita moschata TaxID=3662 RepID=A0A6J1G355_CUCMO) HSP 1 Score: 55.5 bits (132), Expect = 8.180e-7 Identity = 29/72 (40.28%), Postives = 47/72 (65.28%), Query Frame = 1 Query: 1 SSSSPFVCIRLFDPRRIGVASSLCLNGNVIPGVKLQPHESHVGYVLQFMMDHGLAGMELCKIVNPRWRTTFP 216 SS F+ I L+ P+ I A++L LNG ++ + LQP+ESH+ +VLQF++D+ L GM L ++ ++R P Sbjct: 129 SSEELFMKIYLYHPQDITRAANLLLNGAILEKI-LQPYESHIPFVLQFLVDYNLYGMGLLHLMKLKFRHPVP 199
BLAST of mRNA_M-pyrifera_M_contig103175.671.1 vs. uniprot
Match: A0A5A7U379_CUCME (DNA polymerase zeta catalytic subunit n=3 Tax=Cucumis TaxID=3655 RepID=A0A5A7U379_CUCME) HSP 1 Score: 55.5 bits (132), Expect = 8.180e-7 Identity = 31/72 (43.06%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 1 SSSSPFVCIRLFDPRRIGVASSLCLNGNVIPGVKLQPHESHVGYVLQFMMDHGLAGMELCKIVNPRWRTTFP 216 SS F+ I L+ P+ I A++L LNG V+ LQP+ESH+ +VLQF++D+ L GM L +V ++R P Sbjct: 129 SSEELFMKIYLYYPQDITRAANLLLNGAVLEK-SLQPYESHIPFVLQFLVDYNLYGMGLLHLVKLKFRLPVP 199 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103175.671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103175.671.1 >prot_M-pyrifera_M_contig103175.671.1 ID=prot_M-pyrifera_M_contig103175.671.1|Name=mRNA_M-pyrifera_M_contig103175.671.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp SSSSPFVCIRLFDPRRIGVASSLCLNGNVIPGVKLQPHESHVGYVLQFMMback to top mRNA from alignment at M-pyrifera_M_contig103175:365..649- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103175.671.1 ID=mRNA_M-pyrifera_M_contig103175.671.1|Name=mRNA_M-pyrifera_M_contig103175.671.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=285bp|location=Sequence derived from alignment at M-pyrifera_M_contig103175:365..649- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103175:365..649- >mRNA_M-pyrifera_M_contig103175.671.1 ID=mRNA_M-pyrifera_M_contig103175.671.1|Name=mRNA_M-pyrifera_M_contig103175.671.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig103175:365..649- (Macrocystis pyrifera P11B4 male)back to top |