mRNA_M-pyrifera_M_contig103165.667.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103165.667.1 vs. uniprot
Match: A0A847Y7A6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Thermogutta sp. TaxID=1962930 RepID=A0A847Y7A6_9BACT) HSP 1 Score: 65.1 bits (157), Expect = 9.540e-12 Identity = 38/85 (44.71%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 10 QPRNPRRGVLLLVVMALLALMATVTMTFVLVSGVQMRSARGTALADLDTNSHEALLDGAMDQVLRGSDNYTSPIGAHSLIEDVYG 264 +PR RRGV+LL+V+ALLA+ V + FV+V+G R A L + + E L + QV+RGS+N TS + HSL+ED+YG Sbjct: 5 KPRAQRRGVVLLLVLALLAVFGVVVLAFVVVTGFARRGAETAKLHQVQYDPPEKTLYQVLMQVVRGSNNPTSAVWCHSLLEDIYG 89
BLAST of mRNA_M-pyrifera_M_contig103165.667.1 vs. uniprot
Match: A0A7X8UY16_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7X8UY16_9BACT) HSP 1 Score: 67.0 bits (162), Expect = 7.840e-11 Identity = 42/90 (46.67%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 1 MLFQPRNPRRGVLLLVVMALLALMATVTMTFVLVSGVQMRSARGTALADLDTNSHEALLDGAMDQVLRGSDNYTSPIGAHSLIEDVYGID 270 M + RRGVLLLV++ALLA+ V +TFV+V+ +A D T+ LL+ A+ QVLRGS N S IG HSL+EDVY D Sbjct: 1 MRYAKHKSRRGVLLLVILALLAMFGMVAVTFVVVASQARIAAEAHQRMDETTDPPRKLLNAALMQVLRGSTNDASAIGPHSLLEDVYAFD 90
BLAST of mRNA_M-pyrifera_M_contig103165.667.1 vs. uniprot
Match: A0A7C3E6Q4_9BACT (SBP_bac_5 domain-containing protein n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A7C3E6Q4_9BACT) HSP 1 Score: 63.2 bits (152), Expect = 1.680e-9 Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 16 RNPRRGVLLLVVMALLALMATVTMTFVLVSGVQMRSARGTALADLDTNSHEALLDGAMDQVLRGSDNYTSPIGAHSLIEDVYG 264 R+ RRGVLLLV++ALLA+ V + FV++SG MR+A D ++ A LD A+ +V+RGS+N S I H+L+ED+YG Sbjct: 29 RHRRRGVLLLVILALLAMFGLVAVAFVVLSGQAMRAATAMQRIDEYSDRPRADLDRALMEVVRGSNNPMSAIQWHNLLEDMYG 111
BLAST of mRNA_M-pyrifera_M_contig103165.667.1 vs. uniprot
Match: A0A7V4HUK5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4HUK5_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 6.170e-9 Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 1 Query: 16 RNPRRGVLLLVVMALLALMATVTMTFVLVSGVQMRSARGTALADLDTNSHEALLDGAMDQVLRGSDNYTSPIGAHSLIEDVYG 264 R RRGVLLL+V+ALLA+ + ++FV++SG R A + +S L+ A+ QVLRG+++ S IGAHSL+ED+YG Sbjct: 8 RVSRRGVLLLLVLALLAMFGLLAISFVVISGQAKRGAEAVSKRLRLEDSPRELMGEAIAQVLRGTNSSVSGIGAHSLLEDLYG 90
BLAST of mRNA_M-pyrifera_M_contig103165.667.1 vs. uniprot
Match: E8R143_ISOPI (Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) TaxID=575540 RepID=E8R143_ISOPI) HSP 1 Score: 60.5 bits (145), Expect = 1.580e-8 Identity = 37/88 (42.05%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 25 RRGVLLLVVMALLALMATVTMTFVLVSGVQMRSARGTALADLDTNSHEALLDGAMDQVLRGSDNYTSPIGAHSLIEDVYGIDARLNGM 288 RRGV+L++V+ALL+LMA + +TF +SG RS+R A + L+ + + L+D A++Q++ + N S I HS+ D+YG DA+ NG Sbjct: 27 RRGVVLILVLALLSLMALIGVTFATISGQYQRSSRSFAQSLLNPPAAD-LVDYALNQLINDTGNPLSAIRGHSIKRDMYGNDAQYNGF 113
BLAST of mRNA_M-pyrifera_M_contig103165.667.1 vs. uniprot
Match: A0A7V3N9V5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V3N9V5_9BACT) HSP 1 Score: 56.6 bits (135), Expect = 3.530e-7 Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 25 RRGVLLLVVMALLALMATVTMTFVLVSGVQMRSARGTALADLDTNSHEALLDGAMDQVLRGSDNYTSPIGAHSLIEDVYG 264 RRGVL+L+V+ LLA+ V + FV+++G + A D + E L+ +VLRGS+N TS IG HSL+ED+YG Sbjct: 10 RRGVLMLLVLGLLAMFGMVAIAFVIITGQFRQIAETNRKIDEYRRAPEEELEQVALEVLRGSENETSAIGHHSLLEDLYG 89
BLAST of mRNA_M-pyrifera_M_contig103165.667.1 vs. uniprot
Match: A0A518K2X6_9BACT (Uncharacterized protein n=1 Tax=Botrimarina mediterranea TaxID=2528022 RepID=A0A518K2X6_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 8.110e-6 Identity = 34/85 (40.00%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 16 RNPRRGVLLLVVMALLALMATVTMTFVLVSGVQMRSARGTALADLDTNSHEALLDGAMDQVLRGSDNYTSPIGAHSLIEDVYGID 270 R RRGVLLLVV+++L L + TF+L SG +++ A T LL+ A+ Q++R ++N +S I HSL+ D+YG+D Sbjct: 11 RAERRGVLLLVVLSMLVLFLLLGTTFLLTSGQYRTASKIVEKAHRTTFQPADLLERALMQLVRDTNNSSSVIRYHSLLRDMYGVD 95
BLAST of mRNA_M-pyrifera_M_contig103165.667.1 vs. uniprot
Match: A0A517TR00_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium MalM25 TaxID=2527998 RepID=A0A517TR00_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 8.120e-6 Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 25 RRGVLLLVVMALLALMATVTMTFVLVSGVQMRSARGTALADLDTNSHEALLDGAMDQVLRGSDNYTSPIGAHSLIEDVYGID 270 RRGVLLLVV+++L L V TF++ SG ++ A+ T LL+ A+ Q++R ++N +S I HSL+ D+YG+D Sbjct: 23 RRGVLLLVVLSMLVLFLLVGTTFLITSGQYRTQSKVVEKANRSTFQPADLLERALMQLVRDTNNPSSVIRHHSLLRDLYGVD 104
BLAST of mRNA_M-pyrifera_M_contig103165.667.1 vs. uniprot
Match: A0A5C5VHD5_9BACT (Uncharacterized protein n=1 Tax=Posidoniimonas corsicana TaxID=1938618 RepID=A0A5C5VHD5_9BACT) HSP 1 Score: 52.0 bits (123), Expect = 1.510e-5 Identity = 34/82 (41.46%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 25 RRGVLLLVVMALLALMATVTMTFVLVSGVQMRSARGTALADLDTNSHEALLDGAMDQVLRGSDNYTSPIGAHSLIEDVYGID 270 RRGVLLL+V+++L + V FVL +AR A A++ LLD A+ QVLR +++ S I HSL+ D YG D Sbjct: 24 RRGVLLLIVLSILVMFMLVGTAFVLTGSRVSDAARAGAKANVAAPQQADLLDRALRQVLRDTNDRNSAIRYHSLLRDAYGTD 105
BLAST of mRNA_M-pyrifera_M_contig103165.667.1 vs. uniprot
Match: A0A5C5W7X9_9BACT (Uncharacterized protein n=1 Tax=Botrimarina hoheduenensis TaxID=2528000 RepID=A0A5C5W7X9_9BACT) HSP 1 Score: 51.6 bits (122), Expect = 2.070e-5 Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 25 RRGVLLLVVMALLALMATVTMTFVLVSGVQMRSARGTALADLDTNSHEALLDGAMDQVLRGSDNYTSPIGAHSLIEDVYGID 270 RRGV++LVV+++L L V TF++ SG ++R A+ T LL+ A+ Q+LR ++N S HSL+ D+YG D Sbjct: 36 RRGVIMLVVLSMLVLFMLVGTTFLITSGQYRTASRAIEKANRSTQQPADLLERALMQLLRDTNNRYSTARYHSLLRDLYGSD 117 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103165.667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103165.667.1 >prot_M-pyrifera_M_contig103165.667.1 ID=prot_M-pyrifera_M_contig103165.667.1|Name=mRNA_M-pyrifera_M_contig103165.667.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp MLFQPRNPRRGVLLLVVMALLALMATVTMTFVLVSGVQMRSARGTALADLback to top mRNA from alignment at M-pyrifera_M_contig103165:94..387- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103165.667.1 ID=mRNA_M-pyrifera_M_contig103165.667.1|Name=mRNA_M-pyrifera_M_contig103165.667.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig103165:94..387- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103165:94..387- >mRNA_M-pyrifera_M_contig103165.667.1 ID=mRNA_M-pyrifera_M_contig103165.667.1|Name=mRNA_M-pyrifera_M_contig103165.667.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig103165:94..387- (Macrocystis pyrifera P11B4 male)back to top |