mRNA_M-pyrifera_M_contig103148.659.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103148.659.1
Unique NamemRNA_M-pyrifera_M_contig103148.659.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103148.659.1 vs. uniprot
Match: A0A2E3MHP9_9GAMM (Beta sliding clamp n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E3MHP9_9GAMM)

HSP 1 Score: 196 bits (499), Expect = 3.560e-58
Identity = 103/217 (47.47%), Postives = 137/217 (63.13%), Query Frame = 1
Query:    1 GRKFLDICKKLPSQENVEISHNNQKVTLKTSLGRYTLATIAPEEFPNIEEDKPLLEFQIAQNELKKLLEKTHYAMAQQDVRYYLNGMLWEVLAGDLNVVAMDGHRFAHAFQKISSGNNENNKVLAPYKGVAELNRLLEPSDEPAMVTFCANHLSVTMDSINFRCKLIDGAFPDYKMLLRAVGKNSLVIDSEQLKQVLSRLAILASEQDNAVRLDLSQ 651
            GRK +DIC+ LP +  V ++ + Q+VTLK+   R+TL+T+  EEFP +E +    EF + QN LK+ +E   +AMAQQDVRYYLNGMLW+V  G    VA DGHR A A   +  G +E  +V+ P KG+ EL RLLE SD+   V    NHL +  DS  F  KLIDG FPDY+ +L   G N L+ D E +KQ L R ++L +E+   VR +LSQ
Sbjct:   72 GRKLVDICRSLPDEAEVSLTLDKQQVTLKSGRSRFTLSTLPAEEFPFVEGEAANAEFNLPQNLLKEHIEHIQFAMAQQDVRYYLNGMLWQVGNGKFTNVATDGHRLALAEHSLDLGLSELCQVIVPRKGIIELGRLLEVSDDHVTVKIGTNHLIIDADSFTFTSKLIDGRFPDYQKVLPKAGNNILICDKEVIKQALVRASVLTNEKYRGVRFELSQ 288          
BLAST of mRNA_M-pyrifera_M_contig103148.659.1 vs. uniprot
Match: UPI0004866BBC (DNA polymerase III subunit beta n=1 Tax=Marinobacterium jannaschii TaxID=64970 RepID=UPI0004866BBC)

HSP 1 Score: 193 bits (491), Expect = 5.620e-57
Identity = 93/218 (42.66%), Postives = 143/218 (65.60%), Query Frame = 1
Query:    1 GRKFLDICKKLPSQENVEISHNNQKVTLKTSLGRYTLATIAPEEFPNIEEDKPLLEFQIAQNELKKLLEKTHYAMAQQDVRYYLNGMLWEVLAGDLNVVAMDGHRFAHAFQKISSGNNENNKVLAPYKGVAELNRLLEPSDEPAMVTFCANHLSVTMDSINFRCKLIDGAFPDYKMLLRAVGKNSLVIDSEQLKQVLSRLAILASEQDNAVRLDLSQG 654
             RK +DICK LP +  +E++ + QK  +K+   R++L+T+   EFPN+EE    LE  + Q++L++L++KT ++MAQQDVRYYLNGML E+  G L  V+ DGHR A    ++ + N+ N++V+ P KG+ EL RLL+  D+P  +   ANH+   +    F  KL+DG FPDY+ ++   G   ++ D ++L+QV SR+AIL++E+   VRL LS G
Sbjct:   72 ARKLMDICKSLPDESRIELTLSGQKAIIKSGRSRFSLSTLPAAEFPNVEESPETLELSMLQSQLRQLIDKTGFSMAQQDVRYYLNGMLLEIANGQLRSVSTDGHRLATCVSEVQADNSLNHQVIVPRKGILELARLLQGGDDPVRLVIGANHVRAHVGDFIFTSKLVDGKFPDYQRVIPRNGDKFMLGDRQELRQVFSRIAILSNEKYRGVRLTLSNG 289          
BLAST of mRNA_M-pyrifera_M_contig103148.659.1 vs. uniprot
Match: A0A3D4UB52_9GAMM (Beta sliding clamp n=1 Tax=Moraxellaceae bacterium TaxID=1889775 RepID=A0A3D4UB52_9GAMM)

HSP 1 Score: 193 bits (490), Expect = 7.930e-57
Identity = 100/216 (46.30%), Postives = 137/216 (63.43%), Query Frame = 1
Query:    1 GRKFLDICKKLPSQENVEISHNNQKVTLKTSLGRYTLATIAPEEFPNIEEDKPLLEFQIAQNELKKLLEKTHYAMAQQDVRYYLNGMLWEVLAGDLNVVAMDGHRFAHAFQKISSGNNENNKVLAPYKGVAELNRLLEPSDEPAMVTFCANHLSVTMDSINFRCKLIDGAFPDYKMLLRAVGKNSLVIDSEQLKQVLSRLAILASEQDNAVRLDLS 648
             RK LDICK LP+   +E+  + QK+ LK+   R+TLAT+   EFPN+EE      F I Q  LKKL++KT +AMAQQDVRYYLNGML+EV AG L  VA DGHR A    +  +   E  +V+ P KGV EL RLL   D    +T  +NH+  T+ ++ F  KLIDG FPDY+ +L   G  +++ + E+L+  L+R AIL++E+   +RL L+
Sbjct:   72 ARKLLDICKSLPASAEIELKQDGQKLVLKSGKSRFTLATLPANEFPNLEEGVGAFSFSITQKGLKKLIDKTSFAMAQQDVRYYLNGMLFEVTAGRLRTVATDGHRLAMCDAEAQTDAVERMQVIVPRKGVQELARLLNDDDGIVTITLGSNHIRATVGNVTFTSKLIDGKFPDYERVLPKGGDKTVLANREELRHSLTRAAILSNEKFRGIRLQLT 287          
BLAST of mRNA_M-pyrifera_M_contig103148.659.1 vs. uniprot
Match: A0A8J7FFS9_9GAMM (Beta sliding clamp n=1 Tax=Pontibacterium sp. N1Y112 TaxID=2781979 RepID=A0A8J7FFS9_9GAMM)

HSP 1 Score: 192 bits (488), Expect = 1.580e-56
Identity = 93/218 (42.66%), Postives = 140/218 (64.22%), Query Frame = 1
Query:    1 GRKFLDICKKLPSQENVEISHNNQKVTLKTSLGRYTLATIAPEEFPNIEEDKPLLEFQIAQNELKKLLEKTHYAMAQQDVRYYLNGMLWEVLAGDLNVVAMDGHRFAHAFQKISSGNNENNKVLAPYKGVAELNRLLEPSDEPAMVTFCANHLSVTMDSINFRCKLIDGAFPDYKMLLRAVGKNSLVIDSEQLKQVLSRLAILASEQDNAVRLDLSQG 654
             RK +DICK LP +  +E++ + QK+ +KT   R+TL+T+   EFPN+E+    L+  I+QN+L+KL++KT ++MAQQDVRYYLNGML E+  G L  V+ DGHR A     +    +  ++++ P KG+ EL RLL+  DEP  +   A H+   +    F  KL+DG FPDY+ ++   G   ++ D ++L+QV SR+AIL++E+   VRL LS G
Sbjct:   72 ARKLMDICKSLPDEARIELALSGQKMVIKTGRSRFTLSTLPAAEFPNVEDGPETLDLTISQNQLRKLIDKTGFSMAQQDVRYYLNGMLLEIANGQLRSVSTDGHRLATCVSDVEVDESVQHQIIVPRKGILELARLLQQGDEPLRLVIGATHIRAHVGDFIFTSKLVDGKFPDYQRVIPRNGDKIMLGDRQELRQVFSRIAILSNEKYRGVRLSLSDG 289          
BLAST of mRNA_M-pyrifera_M_contig103148.659.1 vs. uniprot
Match: A0A1Y6BQ04_9ALTE (Beta sliding clamp n=1 Tax=Alteromonadaceae bacterium Bs31 TaxID=1304903 RepID=A0A1Y6BQ04_9ALTE)

HSP 1 Score: 190 bits (483), Expect = 8.840e-56
Identity = 97/218 (44.50%), Postives = 140/218 (64.22%), Query Frame = 1
Query:    1 GRKFLDICKKLPSQENVEISHNNQKVTLKTSLGRYTLATIAPEEFPNIEEDKPLLEFQIAQNELKKLLEKTHYAMAQQDVRYYLNGMLWEVLAGDLNVVAMDGHRFAHAFQKISSGNNENNKVLAPYKGVAELNRLLEPSDEPAMVTFCANHLSVTMDSINFRCKLIDGAFPDYKMLLRAVGKNSLVIDSEQLKQVLSRLAILASEQDNAVRLDLSQG 654
             +KFLDIC+ LP   N+E S  +QKVT+K+   R+TL+T+   EFP +E+    L F   Q E+K+L+++T +AMAQQDVRYYLNGMLWEV + +L VVA DGHR A   + ++    +  + + P KGV EL+RLL  SDE   V+  ++H+  T     F  KL+DG FPDY+ +L   G   ++ D  +LKQ  +R +IL++E+   VRL+L +G
Sbjct:   72 AKKFLDICRALPDDSNIEFSLKDQKVTVKSGRTRFTLSTLPGNEFPAVEQGSNDLSFSSEQKEVKRLIDRTSFAMAQQDVRYYLNGMLWEVRSQELRVVATDGHRLAMCTRPVNVEIADLRQAILPRKGVIELSRLLNDSDENVEVSLGSSHIRATTSEYTFTSKLVDGKFPDYERVLPKGGDKFVIGDRAELKQAFARTSILSNEKYRGVRLELEEG 289          
BLAST of mRNA_M-pyrifera_M_contig103148.659.1 vs. uniprot
Match: A0A2A5HU92_9ALTE (Beta sliding clamp n=1 Tax=Alteromonadaceae bacterium TaxID=1916082 RepID=A0A2A5HU92_9ALTE)

HSP 1 Score: 190 bits (483), Expect = 8.840e-56
Identity = 99/213 (46.48%), Postives = 136/213 (63.85%), Query Frame = 1
Query:    1 GRKFLDICKKLPSQENVEISHNNQKVTLKTSLGRYTLATIAPEEFPNIEEDKPLLEFQIAQNELKKLLEKTHYAMAQQDVRYYLNGMLWEVLAGDLNVVAMDGHRFAHAFQKISSGNNENNKVLAPYKGVAELNRLLEPSDEPAMVTFCANHLSVTMDSINFRCKLIDGAFPDYKMLLRAVGKNSLVIDSEQLKQVLSRLAILASEQDNAVRL 639
             +KFLDIC+ LP    +  S + QKVT+K++  R++L+T+ P EFP++E     L F  AQ E+K+L+EKT +AMAQQDVRYYLNGMLWE   G+L VVA DGHR A   + I+    EN + + P KGV EL+RL+E SDE   +   ANH+     S  F  KL+DG FPDY+ +L   G   ++ D E L+   +R AIL++E+   VR+
Sbjct:   72 AKKFLDICRALPDGAVINFSLDEQKVTVKSARSRFSLSTLPPSEFPSVEGGDNDLSFSCAQREIKRLIEKTSFAMAQQDVRYYLNGMLWEARNGELRVVATDGHRLAMCTRPINLELAENRQSILPRKGVIELSRLMEDSDELVEIVLGANHIRALTKSYLFTSKLVDGNFPDYQRVLPVGGDKEIIGDREVLRHAFTRTAILSNEKYRGVRI 284          
BLAST of mRNA_M-pyrifera_M_contig103148.659.1 vs. uniprot
Match: A0A2A4W8A3_9GAMM (Beta sliding clamp n=2 Tax=root TaxID=1 RepID=A0A2A4W8A3_9GAMM)

HSP 1 Score: 190 bits (482), Expect = 1.310e-55
Identity = 94/218 (43.12%), Postives = 140/218 (64.22%), Query Frame = 1
Query:    1 GRKFLDICKKLPSQENVEISHNNQKVTLKTSLGRYTLATIAPEEFPNIEEDKPLLEFQIAQNELKKLLEKTHYAMAQQDVRYYLNGMLWEVLAGDLNVVAMDGHRFAHAFQKISSGNNENNKVLAPYKGVAELNRLLEPSDEPAMVTFCANHLSVTMDSINFRCKLIDGAFPDYKMLLRAVGKNSLVIDSEQLKQVLSRLAILASEQDNAVRLDLSQG 654
             RKF+DICK LP   ++ ++ +  +  ++    R+ L+T+ P++FP I+ +K +LEF + Q ELK+ +E+T +AMA QDVRYYLNGML E+ +  L +VA DGHR A       S  NE+ +V+ P KGV E+ RLLE +D  A +   +N++ VT D + F  KLIDG FPDY+ +L   G   ++ +  +LKQ LSR++IL++E+   VRL  S G
Sbjct:   74 ARKFMDICKALPDGVDINLTIDGDRAIVRAGKSRFVLSTLPPDDFPGIDANKDILEFSMPQIELKQAIERTQFAMAHQDVRYYLNGMLLEISSNALRLVATDGHRLALCDHSFESPQNESQQVIVPRKGVMEIARLLEDTDSIAKIQMGSNYIRVTTDGVTFTSKLIDGRFPDYQNVLPEGGDKIVICNKSELKQALSRVSILSNEKYRGVRLQFSNG 291          
BLAST of mRNA_M-pyrifera_M_contig103148.659.1 vs. uniprot
Match: UPI001A8C7376 (DNA polymerase III subunit beta n=1 Tax=Motiliproteus sp. SC1-56 TaxID=2799565 RepID=UPI001A8C7376)

HSP 1 Score: 189 bits (479), Expect = 3.510e-55
Identity = 97/218 (44.50%), Postives = 141/218 (64.68%), Query Frame = 1
Query:    1 GRKFLDICKKLPSQENVEISHNNQKVTLKTSLGRYTLATIAPEEFPNIEEDKPLLEFQIAQNELKKLLEKTHYAMAQQDVRYYLNGMLWEVLAGDLNVVAMDGHRFAHAFQKISSGNNENNKVLAPYKGVAELNRLLEPSDEPAMVTFCANHLSVTMDSINFRCKLIDGAFPDYKMLLRAVGKNSLVIDSEQLKQVLSRLAILASEQDNAVRLDLSQG 654
             +K +DICK LP   ++E++   QKVT+K    R+TLAT+   EFPN+E+    LE  I Q++L+ L+E+T +AMAQQDVRYYLNGML E+    L  VA DGHR A +   + +  ++  +V+ P KG+ EL RLLE SD+ A +   ++H+ V   +  F  KL+DG FPDY+ ++   G   L+ D ++L+ VLSR+AIL++E+   VRL LS G
Sbjct:   72 AKKLMDICKSLPDHVDIELTLTGQKVTIKGGRSRFTLATLPAAEFPNVEDGPENLEIGIPQDKLRHLIERTSFAMAQQDVRYYLNGMLLELEGTRLRTVATDGHRLATSICDVEAQIDQKQQVIVPRKGILELGRLLEDSDKEARLVVGSSHIRVNTGTFIFTSKLVDGKFPDYERVIPRGGDKLLIADRQELRSVLSRIAILSNEKYRGVRLALSDG 289          
BLAST of mRNA_M-pyrifera_M_contig103148.659.1 vs. uniprot
Match: A0A1R1MIJ5_9GAMM (Beta sliding clamp n=1 Tax=Motiliproteus sp. MSK22-1 TaxID=1897630 RepID=A0A1R1MIJ5_9GAMM)

HSP 1 Score: 189 bits (479), Expect = 3.600e-55
Identity = 97/218 (44.50%), Postives = 138/218 (63.30%), Query Frame = 1
Query:    1 GRKFLDICKKLPSQENVEISHNNQKVTLKTSLGRYTLATIAPEEFPNIEEDKPLLEFQIAQNELKKLLEKTHYAMAQQDVRYYLNGMLWEVLAGDLNVVAMDGHRFAHAFQKISSGNNENNKVLAPYKGVAELNRLLEPSDEPAMVTFCANHLSVTMDSINFRCKLIDGAFPDYKMLLRAVGKNSLVIDSEQLKQVLSRLAILASEQDNAVRLDLSQG 654
             +K +DICK LP   +VE++   QKVT+K    R+TLAT+   EFPNIE+    LE  I Q +L+ L+E+T +AMAQQDVRYYLNGML E+    L  VA DGHR A +   +    +   +V+ P KG+ EL RLLE SD  A +   +NH+ V      F  KL+DG FPDY+ ++   G   ++ + ++L+QVLSR++IL++E+   VRL L++G
Sbjct:   72 AKKLMDICKSLPDHVDVELTLTGQKVTIKGGRSRFTLATLPASEFPNIEDGPRTLEIPIPQGKLRHLIERTGFAMAQQDVRYYLNGMLLELDGSQLRTVATDGHRLATSICSVEQELSVKQQVIVPRKGILELARLLEDSDNEAQLVIGSNHIRVNTGDYVFTSKLVDGKFPDYERVIPRGGDKQIIANRQELRQVLSRISILSNEKYRGVRLALTEG 289          
BLAST of mRNA_M-pyrifera_M_contig103148.659.1 vs. uniprot
Match: A0A523KNH2_9GAMM (Beta sliding clamp n=2 Tax=Bacteria TaxID=2 RepID=A0A523KNH2_9GAMM)

HSP 1 Score: 187 bits (476), Expect = 9.600e-55
Identity = 94/218 (43.12%), Postives = 140/218 (64.22%), Query Frame = 1
Query:    1 GRKFLDICKKLPSQENVEISHNNQKVTLKTSLGRYTLATIAPEEFPNIEEDKPLLEFQIAQNELKKLLEKTHYAMAQQDVRYYLNGMLWEVLAGDLNVVAMDGHRFAHAFQKISSGNNENNKVLAPYKGVAELNRLLEPSDEPAMVTFCANHLSVTMDSINFRCKLIDGAFPDYKMLLRAVGKNSLVIDSEQLKQVLSRLAILASEQDNAVRLDLSQG 654
             RK LDICK LP +  +E    + +V L ++  R+TL+++  ++FP +++   L  F+I Q + K LLE T +AMAQQDVRYYLNG+L E+    L +VA DGHR A +  KIS   +E  +++ P K V EL+RLL+P+D  A +    NH+ V + ++ F  KLIDG FPDY  ++   G  +LV+D E LK+ +SR+AIL++E+   +RL L+ G
Sbjct:   71 ARKLLDICKALPDESEIEFDIEDNRVLLTSARSRFTLSSLPGKDFPGLDDIDELQSFEIPQGKFKSLLENTAFAMAQQDVRYYLNGILMEISPDQLKLVATDGHRLALSEYKISISIDEAKQIIIPRKAVLELSRLLQPNDRKAKIILSQNHIRVEIGTLVFTSKLIDGKFPDYNRVIPVDGNKTLVVDRESLKRAMSRIAILSNEKYRGIRLTLTSG 288          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103148.659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3MHP9_9GAMM3.560e-5847.47Beta sliding clamp n=1 Tax=Legionellales bacterium... [more]
UPI0004866BBC5.620e-5742.66DNA polymerase III subunit beta n=1 Tax=Marinobact... [more]
A0A3D4UB52_9GAMM7.930e-5746.30Beta sliding clamp n=1 Tax=Moraxellaceae bacterium... [more]
A0A8J7FFS9_9GAMM1.580e-5642.66Beta sliding clamp n=1 Tax=Pontibacterium sp. N1Y1... [more]
A0A1Y6BQ04_9ALTE8.840e-5644.50Beta sliding clamp n=1 Tax=Alteromonadaceae bacter... [more]
A0A2A5HU92_9ALTE8.840e-5646.48Beta sliding clamp n=1 Tax=Alteromonadaceae bacter... [more]
A0A2A4W8A3_9GAMM1.310e-5543.12Beta sliding clamp n=2 Tax=root TaxID=1 RepID=A0A2... [more]
UPI001A8C73763.510e-5544.50DNA polymerase III subunit beta n=1 Tax=Motiliprot... [more]
A0A1R1MIJ5_9GAMM3.600e-5544.50Beta sliding clamp n=1 Tax=Motiliproteus sp. MSK22... [more]
A0A523KNH2_9GAMM9.600e-5543.12Beta sliding clamp n=2 Tax=Bacteria TaxID=2 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103148contigM-pyrifera_M_contig103148:2..655 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score189.9
Seed ortholog evalue1.3e-45
Seed eggNOG ortholog1117647.M5M_12445
Preferred namednaN
KEGG rclassRC02795
KEGG koko:K02338
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440
KEGG ModuleM00260
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003887,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0022616,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
EggNOG OGs1J4Z6@118884,1MVD9@1224,1RMNP@1236,COG0592@1,COG0592@2
EC2.7.7.7
COG Functional cat.L
Best tax levelunclassified Gammaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03400
Exons1
Model size654
Cds size654
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815535.8515487-CDS-M-pyrifera_M_contig103148:1..6551622815535.8515487-CDS-M-pyrifera_M_contig103148:1..655Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103148 2..655 +
1692277453.5576985-CDS-M-pyrifera_M_contig103148:1..6551692277453.5576985-CDS-M-pyrifera_M_contig103148:1..655Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103148 2..655 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103148.659.1prot_M-pyrifera_M_contig103148.659.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103148 2..655 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103148.659.1

>prot_M-pyrifera_M_contig103148.659.1 ID=prot_M-pyrifera_M_contig103148.659.1|Name=mRNA_M-pyrifera_M_contig103148.659.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=218bp
GRKFLDICKKLPSQENVEISHNNQKVTLKTSLGRYTLATIAPEEFPNIEE
DKPLLEFQIAQNELKKLLEKTHYAMAQQDVRYYLNGMLWEVLAGDLNVVA
MDGHRFAHAFQKISSGNNENNKVLAPYKGVAELNRLLEPSDEPAMVTFCA
NHLSVTMDSINFRCKLIDGAFPDYKMLLRAVGKNSLVIDSEQLKQVLSRL
AILASEQDNAVRLDLSQG
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mRNA from alignment at M-pyrifera_M_contig103148:2..655+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103148.659.1 ID=mRNA_M-pyrifera_M_contig103148.659.1|Name=mRNA_M-pyrifera_M_contig103148.659.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig103148:2..655+ (Macrocystis pyrifera P11B4 male)
GGACGTAAGTTTTTAGATATTTGTAAGAAGCTGCCTAGTCAGGAAAATGT CGAGATTTCTCATAATAATCAAAAGGTTACGTTAAAAACATCATTGGGCC GTTACACATTGGCGACAATTGCGCCGGAAGAATTTCCGAATATTGAAGAA GATAAGCCTTTGCTTGAGTTTCAAATTGCACAAAATGAGCTCAAAAAATT GTTAGAAAAAACCCATTATGCGATGGCTCAACAGGACGTTCGTTATTACT TGAATGGTATGCTATGGGAAGTATTGGCAGGTGATTTGAATGTTGTTGCG ATGGATGGGCACCGTTTTGCGCATGCCTTCCAGAAAATTTCATCTGGCAA TAATGAAAATAACAAGGTGTTAGCGCCCTATAAGGGCGTTGCAGAGTTAA ATCGTTTGCTTGAACCATCAGATGAGCCCGCGATGGTTACATTCTGTGCC AATCATTTAAGCGTAACGATGGATTCTATTAATTTTCGTTGTAAGCTGAT TGATGGTGCTTTTCCTGATTATAAAATGCTGTTACGCGCAGTTGGCAAGA ATTCTCTGGTGATTGATAGTGAGCAGCTTAAGCAAGTTCTTAGTCGCCTA GCCATTCTAGCTAGCGAGCAAGATAATGCTGTACGACTGGATCTCAGCCA AGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig103148:2..655+

>mRNA_M-pyrifera_M_contig103148.659.1 ID=mRNA_M-pyrifera_M_contig103148.659.1|Name=mRNA_M-pyrifera_M_contig103148.659.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1308bp|location=Sequence derived from alignment at M-pyrifera_M_contig103148:2..655+ (Macrocystis pyrifera P11B4 male)
GGACGTAAGTTTTTAGATATTTGTAAGAAGCTGCCTAGTCAGGAAAATGT
CGAGATTTCTCATAATAATCAAAAGGTTACGTTAAAAACATCATTGGGCC
GTTACACATTGGCGACAATTGCGCCGGAAGAATTTCCGAATATTGAAGAA
GATAAGCCTTTGCTTGAGTTTCAAATTGCACAAAATGAGCTCAAAAAATT
GTTAGAAAAAACCCATTATGCGATGGCTCAACAGGACGTTCGTTATTACT
TGAATGGTATGCTATGGGAAGTATTGGCAGGTGATTTGAATGTTGTTGCG
ATGGATGGGCACCGTTTTGCGCATGCCTTCCAGAAAATTTCATCTGGCAA
TAATGAAAATAACAAGGTGTTAGCGCCCTATAAGGGCGTTGCAGAGTTAA
ATCGTTTGCTTGAACCATCAGATGAGCCCGCGATGGTTACATTCTGTGCC
AATCATTTAAGCGTAACGATGGATTCTATTAATTTTCGTTGTAAGCTGAT
TGATGGTGCTTTTCCTGATTATAAAATGCTGTTACGCGCAGTTGGCAAGA
ATTCTCTGGTGATTGATAGTGAGCAGCTTAAGCAAGTTCTTAGTCGCCTA
GCCATTCTAGCTAGCGAGCAAGATAATGCTGTACGACTGGATCTCAGCCA
AGGCGGACGTAAGTTTTTAGATATTTGTAAGAAGCTGCCTAGTCAGGAAA
ATGTCGAGATTTCTCATAATAATCAAAAGGTTACGTTAAAAACATCATTG
GGCCGTTACACATTGGCGACAATTGCGCCGGAAGAATTTCCGAATATTGA
AGAAGATAAGCCTTTGCTTGAGTTTCAAATTGCACAAAATGAGCTCAAAA
AATTGTTAGAAAAAACCCATTATGCGATGGCTCAACAGGACGTTCGTTAT
TACTTGAATGGTATGCTATGGGAAGTATTGGCAGGTGATTTGAATGTTGT
TGCGATGGATGGGCACCGTTTTGCGCATGCCTTCCAGAAAATTTCATCTG
GCAATAATGAAAATAACAAGGTGTTAGCGCCCTATAAGGGCGTTGCAGAG
TTAAATCGTTTGCTTGAACCATCAGATGAGCCCGCGATGGTTACATTCTG
TGCCAATCATTTAAGCGTAACGATGGATTCTATTAATTTTCGTTGTAAGC
TGATTGATGGTGCTTTTCCTGATTATAAAATGCTGTTACGCGCAGTTGGC
AAGAATTCTCTGGTGATTGATAGTGAGCAGCTTAAGCAAGTTCTTAGTCG
CCTAGCCATTCTAGCTAGCGAGCAAGATAATGCTGTACGACTGGATCTCA
GCCAAGGC
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