mRNA_M-pyrifera_M_contig103143.658.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103143.658.1
Unique NamemRNA_M-pyrifera_M_contig103143.658.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103143.658.1 vs. uniprot
Match: A0A316ZGN0_9BASI (Maf1-domain-containing protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316ZGN0_9BASI)

HSP 1 Score: 62.4 bits (150), Expect = 5.210e-9
Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 1
Query:    1 MKFLQIPQFEDVTVALSQLENEECRLQIRLDPYSCKLTNQDKSAYHSLNKSY-EALAKSPSAVVSP---SALGPRSESASRKKLITLVTALNNSFPSNDFWCL-PGSRRRRLGAARVL 339
            MKFL  P+ E ++  L   E+ ECR+  RL+ YSCK  N+DK  + +L  +Y  + + SP + +     S  G   + A+RK L  L++ LN +FP ++F  + P   RR   AA VL
Sbjct:    1 MKFLDYPELELISRDLC-FESAECRVNTRLEAYSCKAINRDKKLFKTLESAYVRSASTSPPSYLEEHLASPFGKLDQPAARKTLWLLISTLNGAFPDHEFAEVNPADFRRERSAASVL 117          
BLAST of mRNA_M-pyrifera_M_contig103143.658.1 vs. uniprot
Match: B3RJE2_TRIAD (Repressor of RNA polymerase III transcription MAF1 n=2 Tax=Trichoplax TaxID=10227 RepID=B3RJE2_TRIAD)

HSP 1 Score: 57.4 bits (137), Expect = 1.750e-7
Identity = 41/107 (38.32%), Postives = 53/107 (49.53%), Query Frame = 1
Query:    1 MKFLQIPQFEDVTVALSQLENEECRLQIRLDPYSCKLTNQDKSAYHSLN------KSYEALAKSPSAVV----SPSALGPRSESASRKKLITLVTALNNSF-PSNDF 288
            MK L    FE +   LS +EN ECR++ R++ YSCK+   DK  Y  LN         +AL+ S  +      SP   G    + SRK L  LV+ LN SF P  DF
Sbjct:    1 MKLLPNVNFESLNSKLSSIENNECRIEGRVESYSCKMAGNDKKLYKMLNIDGETANDLQALSPSQQSFYTQSGSPVVAGQICNTCSRKTLYYLVSTLNASFFPDYDF 107          
BLAST of mRNA_M-pyrifera_M_contig103143.658.1 vs. uniprot
Match: A0A1F5L985_9EURO (Repressor of RNA polymerase III transcription MAF1 n=2 Tax=Penicillium TaxID=5073 RepID=A0A1F5L985_9EURO)

HSP 1 Score: 53.1 bits (126), Expect = 8.320e-6
Identity = 44/133 (33.08%), Postives = 63/133 (47.37%), Query Frame = 1
Query:    1 MKFLQIPQFEDVTVALSQLENEECRLQIRLDPYSCKLTNQDKSAYHSLNKSYEALAKSP---SAVVSP---------------SALGPRSESASRKKLITLVTALNNSFPSNDFWCL--PGSRRRRLGAARVL 339
            MKFL +P+FEDVT +L+  +  +C +    D Y+ K    D+  Y+ + +S EA  +S    SA +SP               S  GP SE +SR+    L+  LN S P  DF  +  P   RR     RV+
Sbjct:    1 MKFLPLPEFEDVTSSLN-FDTADCHIVGGCDIYTTKAARSDRKLYNHIEQSLEAQYESVLRFSASLSPPNAHDAAETLNLSRSSPFGPLSEHSSRRTFAYLIATLNASHPDYDFSHVLRPTDFRRERNLKRVM 132          
BLAST of mRNA_M-pyrifera_M_contig103143.658.1 vs. uniprot
Match: A0A317VQF7_9EURO (Repressor of RNA polymerase III transcription MAF1 n=7 Tax=Aspergillus TaxID=5052 RepID=A0A317VQF7_9EURO)

HSP 1 Score: 52.8 bits (125), Expect = 1.130e-5
Identity = 39/114 (34.21%), Postives = 56/114 (49.12%), Query Frame = 1
Query:    1 MKFLQIPQFEDVTVALSQLENEECRLQIRLDPYSCKLTNQDKSAYHSLNKSYEALAKSP---SAVVSP---------------SALGPRSESASRKKLITLVTALNNSFPSNDF 288
            MKFL +P+FEDVT +LS  +  +C +    D Y+ K    D+  Y ++ +S EA  +S    SA +SP               S  GP S+ +SR+    L+  LN S P  DF
Sbjct:    1 MKFLPLPEFEDVTSSLS-FDTADCHITGSCDLYTTKAARADRKLYKNIEQSLEAQYESVLRLSASLSPPNATDAAASLNLSRSSPFGPLSDHSSRRTFAYLIATLNASHPDYDF 113          
BLAST of mRNA_M-pyrifera_M_contig103143.658.1 vs. uniprot
Match: A0A2T9ZI67_9FUNG (Uncharacterized protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZI67_9FUNG)

HSP 1 Score: 51.6 bits (122), Expect = 1.700e-5
Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = 1
Query:    1 MKFLQIPQFEDVTVALSQLENEECRLQIRLDPYSCKLTNQDKSAYHSLNKSY---EALAKSPSAVVSPSALGP--RSESASRKKLITLVTALNNSFPSNDF 288
            MKFLQIP  +++   LS        +  R++ YSCK+   DK  Y  L K Y   E    + S     SAL     SE++SR+ L  L++ LN+SFP  DF
Sbjct:    1 MKFLQIPDIDNLNELLSFKTASGHFVSGRIEVYSCKIAGDDKKLYKYLKKRYTQEEEELNAASGYSPESALQKVDSSEASSRRILFYLISTLNSSFPDYDF 101          
BLAST of mRNA_M-pyrifera_M_contig103143.658.1 vs. uniprot
Match: S8B562_PENO1 (Repressor of RNA polymerase III transcription MAF1 n=2 Tax=Penicillium TaxID=5073 RepID=S8B562_PENO1)

HSP 1 Score: 52.0 bits (123), Expect = 2.090e-5
Identity = 38/114 (33.33%), Postives = 56/114 (49.12%), Query Frame = 1
Query:    1 MKFLQIPQFEDVTVALSQLENEECRLQIRLDPYSCKLTNQDKSAYHSLNKSYEALAKSP---SAVVSP---------------SALGPRSESASRKKLITLVTALNNSFPSNDF 288
            MKFL +P+FED+T +L+  +  +C +    D Y+ K    D+  Y+ + +S EA  +S    SA +SP               S  GP SE +SR+    L+  LN S P  DF
Sbjct:    1 MKFLPLPEFEDITSSLN-FDTADCHITGGCDLYTTKAARSDRKLYNHIEQSLEAQYESILRLSASLSPPNAHDAAETLNLSRSSPFGPLSEHSSRRTFAYLIATLNASHPDYDF 113          
BLAST of mRNA_M-pyrifera_M_contig103143.658.1 vs. uniprot
Match: A1CFJ0_ASPCL (Repressor of RNA polymerase III transcription MAF1 n=1 Tax=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) TaxID=344612 RepID=A1CFJ0_ASPCL)

HSP 1 Score: 52.0 bits (123), Expect = 2.120e-5
Identity = 43/133 (32.33%), Postives = 63/133 (47.37%), Query Frame = 1
Query:    1 MKFLQIPQFEDVTVALSQLENEECRLQIRLDPYSCKLTNQDKSAYHSLNKSYEALAKSP---SAVVSP---------------SALGPRSESASRKKLITLVTALNNSFPSNDFWCL--PGSRRRRLGAARVL 339
            MK+L IP+FEDVT +L+  +  +C +    D Y+ K    D+  Y ++ +S EA  +S    SA +SP               S  GP S+ +SR+    L+  LN S P  DF  +  P   RR     RV+
Sbjct:    1 MKYLPIPEFEDVTNSLN-FDTADCHITGGCDLYTIKAARADRKLYKNIEQSLEAQYESVLRLSASLSPPNASDAAASLNLSRSSPFGPLSDHSSRRTFAYLIATLNASHPDYDFSHVLRPSDFRRERSLKRVM 132          
BLAST of mRNA_M-pyrifera_M_contig103143.658.1 vs. uniprot
Match: A0A218Z4A2_9HELO (Repressor of RNA polymerase III transcription MAF1 n=1 Tax=Marssonina coronariae TaxID=503106 RepID=A0A218Z4A2_9HELO)

HSP 1 Score: 52.0 bits (123), Expect = 2.150e-5
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 1
Query:    1 MKFLQIPQFEDVTVALSQLENEECRLQIRLDPYSCKLTNQDKSAYHSLNKS----YEALAKSPSAVVSPSA-------------LGPRSESASRKKLITLVTALNNSFPSNDF 288
            MKFL +P F+DVT AL+  +  +C +    D Y+ K    DK  Y  +++S    YE+L +  ++V  P A              GP S+ +SR+    L+  LN S P  DF
Sbjct:    1 MKFLPLPDFDDVTSALN-FDTPDCHVIGGCDLYTTKAAGSDKKLYREIDRSLESQYESLLRLSASVSPPDASGHSPVNLSRSSPFGPLSQVSSRRTFAYLIATLNASHPDYDF 112          
BLAST of mRNA_M-pyrifera_M_contig103143.658.1 vs. uniprot
Match: A0A318ZAC8_9EURO (Repressor of RNA polymerase III transcription MAF1 n=5 Tax=Aspergillus TaxID=5052 RepID=A0A318ZAC8_9EURO)

HSP 1 Score: 51.6 bits (122), Expect = 2.890e-5
Identity = 38/114 (33.33%), Postives = 56/114 (49.12%), Query Frame = 1
Query:    1 MKFLQIPQFEDVTVALSQLENEECRLQIRLDPYSCKLTNQDKSAYHSLNKSYEALAKSP---SAVVSP---------------SALGPRSESASRKKLITLVTALNNSFPSNDF 288
            MKFL +P+FEDVT +L+  +  +C +    D Y+ K    D+  Y ++ +S EA  +S    SA +SP               S  GP S+ +SR+    L+  LN S P  DF
Sbjct:    1 MKFLPLPEFEDVTSSLN-FDTADCHIMGGCDLYTTKAARADRKLYKNIEQSLEAQYESVLRLSASLSPPNASDAAASLNLSRSSPFGPLSDHSSRRTFAYLIATLNASHPDYDF 113          
BLAST of mRNA_M-pyrifera_M_contig103143.658.1 vs. uniprot
Match: A0A0F7TIK3_PENBI (Repressor of RNA polymerase III transcription MAF1 n=1 Tax=Penicillium brasilianum TaxID=104259 RepID=A0A0F7TIK3_PENBI)

HSP 1 Score: 51.2 bits (121), Expect = 3.920e-5
Identity = 39/114 (34.21%), Postives = 55/114 (48.25%), Query Frame = 1
Query:    1 MKFLQIPQFEDVTVALSQLENEECRLQIRLDPYSCKLTNQDKSAYHSLNKSYEALAKSP---SAVVSP---------------SALGPRSESASRKKLITLVTALNNSFPSNDF 288
            MKFL +P FEDVT +L+  +  +C +    D Y+ K    D+  Y+ + +S EA  +S    SA +SP               S  GP SE +SR+    L+  LN S P  DF
Sbjct:    1 MKFLPLPDFEDVTSSLN-FDTADCHIVGGCDLYTTKAARSDRKLYNHIEQSLEAQYESILRLSASLSPPNAHDAAETLNLSRSSPFGPLSEHSSRRTFAYLIATLNASHPDYDF 113          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103143.658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A316ZGN0_9BASI5.210e-936.44Maf1-domain-containing protein n=1 Tax=Tilletiopsi... [more]
B3RJE2_TRIAD1.750e-738.32Repressor of RNA polymerase III transcription MAF1... [more]
A0A1F5L985_9EURO8.320e-633.08Repressor of RNA polymerase III transcription MAF1... [more]
A0A317VQF7_9EURO1.130e-534.21Repressor of RNA polymerase III transcription MAF1... [more]
A0A2T9ZI67_9FUNG1.700e-537.62Uncharacterized protein n=1 Tax=Smittium megazygos... [more]
S8B562_PENO12.090e-533.33Repressor of RNA polymerase III transcription MAF1... [more]
A1CFJ0_ASPCL2.120e-532.33Repressor of RNA polymerase III transcription MAF1... [more]
A0A218Z4A2_9HELO2.150e-532.74Repressor of RNA polymerase III transcription MAF1... [more]
A0A318ZAC8_9EURO2.890e-533.33Repressor of RNA polymerase III transcription MAF1... [more]
A0A0F7TIK3_PENBI3.920e-534.21Repressor of RNA polymerase III transcription MAF1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103143contigM-pyrifera_M_contig103143:94..486 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score67.0
Seed ortholog evalue6.4e-09
Seed eggNOG ortholog120017.I2FPM8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Maf1 regulator
EggNOG OGs38HBA@33154,3N4I2@452284,3P2QH@4751,3V0TZ@5204,COG5046@1,KOG3104@2759
COG Functional cat.K
Best tax levelUstilaginomycotina
Best eggNOG OGNA|NA|NA
Exons2
Model size339
Cds size339
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815535.7797465-CDS-M-pyrifera_M_contig103143:93..3291622815535.7797465-CDS-M-pyrifera_M_contig103143:93..329Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103143 94..329 -
1692277453.538022-CDS-M-pyrifera_M_contig103143:93..3291692277453.538022-CDS-M-pyrifera_M_contig103143:93..329Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103143 94..329 -
1622815535.793627-CDS-M-pyrifera_M_contig103143:383..4861622815535.793627-CDS-M-pyrifera_M_contig103143:383..486Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103143 384..486 -
1692277453.548976-CDS-M-pyrifera_M_contig103143:383..4861692277453.548976-CDS-M-pyrifera_M_contig103143:383..486Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103143 384..486 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103143.658.1prot_M-pyrifera_M_contig103143.658.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103143 94..486 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103143.658.1

>prot_M-pyrifera_M_contig103143.658.1 ID=prot_M-pyrifera_M_contig103143.658.1|Name=mRNA_M-pyrifera_M_contig103143.658.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp
MKFLQIPQFEDVTVALSQLENEECRLQIRLDPYSCKLTNQDKSAYHSLNK
SYEALAKSPSAVVSPSALGPRSESASRKKLITLVTALNNSFPSNDFWCLP
GSRRRRLGAARVL
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mRNA from alignment at M-pyrifera_M_contig103143:94..486-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103143.658.1 ID=mRNA_M-pyrifera_M_contig103143.658.1|Name=mRNA_M-pyrifera_M_contig103143.658.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=393bp|location=Sequence derived from alignment at M-pyrifera_M_contig103143:94..486- (Macrocystis pyrifera P11B4 male)
ATGAAGTTCCTTCAGATACCCCAATTCGAGGACGTTACCGTAGCGCTCTC GCAGCTGGAGAACGAGGAGTGCAGGCTGCAGATCCGCCTGGACCCCTACT CATGTGCGCCGCCCCCCTCGCATTGCTGGGGCCTCAGCTGACGGCGCGGC CCTCCAGGCAAGCTCACAAACCAGGACAAGTCTGCGTACCACTCGCTGAA CAAGTCCTACGAGGCTCTCGCCAAGTCTCCCAGCGCAGTGGTGAGCCCCT CTGCGCTGGGGCCACGCTCGGAGAGCGCGAGCAGGAAGAAGCTCATCACG CTCGTCACCGCCCTCAATAACTCCTTCCCGAGCAACGACTTCTGGTGCCT CCCAGGCTCTCGCCGCCGCCGCCTCGGGGCCGCCCGTGTGCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig103143:94..486-

>mRNA_M-pyrifera_M_contig103143.658.1 ID=mRNA_M-pyrifera_M_contig103143.658.1|Name=mRNA_M-pyrifera_M_contig103143.658.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig103143:94..486- (Macrocystis pyrifera P11B4 male)
ATGAAGTTCCTTCAGATACCCCAATTCGAGGACGTTACCGTAGCGCTCTC
GCAGCTGGAGAACGAGGAGTGCAGGCTGCAGATCCGCCTGGACCCCTACT
CATATGAAGTTCCTTCAGATACCCCAATTCGAGGACGTTACCGTAGCGCT
CTCGCAGCTGGAGAACGAGGAGTGCAGGCTGCAGATCCGCCTGGACCCCT
ACTCATGCAAGCTCACAAACCAGGACAAGTCTGCGTACCACTCGCTGAAC
AAGTCCTACGAGGCTCTCGCCAAGTCTCCCAGCGCAGTGGTGAGCCCCTC
TGCGCTGGGGCCACGCTCGGAGAGCGCGAGCAGGAAGAAGCTCATCACGC
TCGTCACCGCCCTCAATAACTCCTTCCCGAGCAACGACTTCTGGTGCCTC
CCAGGCTCTCGCCGCCGCCGCCTCGGGGCCGCCCGTGTGCTGGCAAGCTC
ACAAACCAGGACAAGTCTGCGTACCACTCGCTGAACAAGTCCTACGAGGC
TCTCGCCAAGTCTCCCAGCGCAGTGGTGAGCCCCTCTGCGCTGGGGCCAC
GCTCGGAGAGCGCGAGCAGGAAGAAGCTCATCACGCTCGTCACCGCCCTC
AATAACTCCTTCCCGAGCAACGACTTCTGGTGCCTCCCAGGCTCTCGCCG
CCGCCGCCTCGGGGCCGCCCGTGTGCTG
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