mRNA_M-pyrifera_M_contig103069.651.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7C3A2P0_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3A2P0_9BACT) HSP 1 Score: 291 bits (744), Expect = 3.840e-94 Identity = 156/217 (71.89%), Postives = 183/217 (84.33%), Query Frame = 1 Query: 1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTN-QVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648 TIGLC+VQS+ IA+FLQS G EIVP PGIGFIL+C+++FTTGTAFIMWLGEQISE GIGNGISLIIFTSIIS MPAA+ +L+ +I + Q+N+F G+ LVFLMV+VV GAIL+TTGQRR+PVQYPRQV+GRRV GGQR+YLPLRVNQAGVIPIIFASSLL LPG + + L IINQ+ P + + LYAILI+FF FFYTAITFNPVE+AD Sbjct: 121 TIGLCIVQSIGIAVFLQSLGTEIVPRPGIGFILMCIISFTTGTAFIMWLGEQISEQGIGNGISLIIFTSIISRMPAALRSLVSLIFVSEQINMFQGLFLVFLMVLVVAGAILITTGQRRIPVQYPRQVKGRRVSGGQRTYLPLRVNQAGVIPIIFASSLLSLPGTIGSAIKIPQLEWIINQMFHPGNVGYMALYAILIIFFGFFYTAITFNPVEVAD 337
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A831UND1_9BACT (Preprotein translocase subunit SecY (Fragment) n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831UND1_9BACT) HSP 1 Score: 276 bits (707), Expect = 1.050e-89 Identity = 143/219 (65.30%), Postives = 181/219 (82.65%), Query Frame = 1 Query: 1 TIGLCLVQSVAIAMFLQS---QGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648 TI LC+VQS+ IA +LQS +GP IVPNPG+GF+L+CV++FTTGTAFIMWLGE+ISEHGIGNGISLIIF SI+S MP A+ N++RM+ +++ IF +++ L+V VV GAILVTTGQRR+PVQYPRQV+GR+V GGQR+YLPLRVNQAGVIPIIFASSLLMLPG LA+ + + + + P+ +++NI +LI+FFSFFYTAITFNPVE+AD Sbjct: 122 TIVLCIVQSIGIAFYLQSIESRGPAIVPNPGLGFVLMCVISFTTGTAFIMWLGERISEHGIGNGISLIIFVSIVSRMPFAMFNVLRMVRQDELQIFQAGIMIILLVAVVAGAILVTTGQRRIPVQYPRQVKGRKVFGGQRNYLPLRVNQAGVIPIIFASSLLMLPGFLAKAVTFPAVRVFFEEWFRPNGILYNIATGVLIIFFSFFYTAITFNPVEMAD 340
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A847GA43_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847GA43_9BACT) HSP 1 Score: 273 bits (697), Expect = 4.550e-87 Identity = 136/216 (62.96%), Postives = 180/216 (83.33%), Query Frame = 1 Query: 1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648 TI LC+VQS+ I ++LQS G +IVPNPG+GF+LL ++T TTGTAF+MW+GEQISEHGIGNGISL+IF I++ MP+++ N+ RMIG +Q++ ++LV +MV+VV GAI+VTTGQRR+PVQYPRQ++GR + GG R+YLPLRVNQAGVIPIIFASS+LMLPG +AQN+ + +N + +P + +N++YA LI+FFSFFYTAITFNPVE+AD Sbjct: 122 TIALCIVQSIGIGVYLQSMGRQIVPNPGVGFLLLSIITLTTGTAFLMWIGEQISEHGIGNGISLLIFVGIVADMPSSVRNVFRMIGNDQMSPILAVMLVGVMVLVVAGAIMVTTGQRRIPVQYPRQIKGRGMTGGTRTYLPLRVNQAGVIPIIFASSILMLPGSIAQNIKIPFIEYWVNWLFNPYGIPYNLIYAGLIIFFSFFYTAITFNPVEMAD 337
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7V2Y704_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y704_9BACT) HSP 1 Score: 270 bits (690), Expect = 5.020e-86 Identity = 140/216 (64.81%), Postives = 177/216 (81.94%), Query Frame = 1 Query: 1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648 TIGLC++QSV I MFLQ+QG +IV NPGIGF+L+CV++FTTGTAFIMW+GE+ISE+G+GNGISLIIF SI S +P AI+ + +MIG +Q++IF ++LV L+ +VV GAI +TTGQRR+PVQYPRQV+GR+V GGQR+YLPLRVNQAGVIPIIFASS+LMLPGML + + I + +N +Y ILI+FFS+FYTAITFNPVE+AD Sbjct: 121 TIGLCIIQSVGIGMFLQNQGEDIVANPGIGFLLMCVISFTTGTAFIMWVGERISENGLGNGISLIIFISIASRLPNAIIRIFQMIGQSQLSIFQALILVALLGIVVAGAIWITTGQRRIPVQYPRQVKGRKVFGGQRNYLPLRVNQAGVIPIIFASSILMLPGMLHGAIAIPAIDDFITNWFDYNGFFYNAIYVILIIFFSYFYTAITFNPVEIAD 336
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7C3WZJ7_9BACT (Protein translocase subunit SecY n=2 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3WZJ7_9BACT) HSP 1 Score: 259 bits (663), Expect = 6.160e-82 Identity = 138/217 (63.59%), Postives = 172/217 (79.26%), Query Frame = 1 Query: 1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTN-QVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648 TI LC++QS+ I+ FLQ G EIVPNPG FI CV++FTTG AF+MW+GEQISE GIGNG+SLIIFTSI+S MPAA+ +L++++ + Q+N+F +VLVFLMV V+ GAI +TTGQRR+PVQYPRQV+GRRV GGQ++YLPLRVNQAGVIPIIFASS+L LP L + + II Q+ P + + I Y LI+FFSFFYTAITFNPVE+AD Sbjct: 121 TIVLCIIQSIGISWFLQGLGREIVPNPGPMFIFTCVLSFTTGAAFVMWIGEQISEFGIGNGMSLIIFTSIVSRMPAALRHLVQLVFVSKQLNMFQALVLVFLMVAVIAGAIAITTGQRRIPVQYPRQVKGRRVSGGQKTYLPLRVNQAGVIPIIFASSILSLPAYLGDTIRIPIIEQIIRQLFYPGNIGYAICYGGLIIFFSFFYTAITFNPVEIAD 337
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7C1CKX6_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1CKX6_9BACT) HSP 1 Score: 259 bits (663), Expect = 6.690e-82 Identity = 138/220 (62.73%), Postives = 171/220 (77.73%), Query Frame = 1 Query: 1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNS----GTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648 TIGLC+VQSV +A+FLQ G EIVPNPGI FI L ++T T GTAFIMWLGEQI+EHGIGNGISLIIF I++ MP AI NL+ ++ ++++ +VL F+MV V+ GAI++TTGQRR+PVQYPRQV+G+RV GGQR+YLPLRVNQAGVIPIIFASS+LMLP L +N+ L IN +P ++N +YAILI+FFSFFYTA TF P E+AD Sbjct: 121 TIGLCIVQSVGMAIFLQGLGREIVPNPGIFFIALTMITMTAGTAFIMWLGEQITEHGIGNGISLIIFVGIVAGMPTAITNLLSLMRNGRISMAMALVLAFMMVFVIAGAIVITTGQRRIPVQYPRQVKGKRVSGGQRTYLPLRVNQAGVIPIIFASSILMLPEALLRNIRIPEGWNWLETGINMAMNPMGFIYNAIYAILIIFFSFFYTASTFRPAEMAD 340
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A1V5YXN7_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YXN7_9BACT) HSP 1 Score: 251 bits (641), Expect = 1.250e-78 Identity = 134/217 (61.75%), Postives = 171/217 (78.80%), Query Frame = 1 Query: 1 TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLN-SGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648 TI LC+VQS+ IA++LQS GP IVP+ G+ FI L ++T T GT+FIMWLGEQI+EHGIGNG+SLIIFT I+S MP AI N+ ++ T+Q++I +VL F+MV VV GAI+VTTGQRR+PVQYP+ V RRV GGQR+YLPLRVNQAGVIPIIFASS+LMLP L ++L+ G L + +P +++N +YA+LI+FFSFFYTA TF P E+AD Sbjct: 121 TIFLCIVQSIGIAVYLQSMGPTIVPHSGVFFIALTMITLTAGTSFIMWLGEQITEHGIGNGMSLIIFTGIVSGMPRAISNMFNLLRTDQISIAVVLVLAFMMVFVVAGAIIVTTGQRRIPVQYPKVVNQRRVSGGQRTYLPLRVNQAGVIPIIFASSILMLPDALVRSLHVPGWLETPLAIALNPQGVIYNAVYALLIIFFSFFYTASTFRPAEMAD 337
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7Z9LNQ5_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Z9LNQ5_9BACT) HSP 1 Score: 250 bits (638), Expect = 3.830e-78 Identity = 132/221 (59.73%), Postives = 175/221 (79.19%), Query Frame = 1 Query: 1 TIGLCLVQSVAIAMFLQSQGPEIVP-----NPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648 TI +C+VQS+A+A FL S P NPG+ F LLCV++FTTGTAFIMW+GEQISEHGIGNG+SLIIF SII+ MP A++NL+R+I T +++IF +L+ + V VV G ILVTTGQRR+P+QYPRQV+GR VMG QRSYLPL+VNQAGVIPIIFASSLLM+P MLA ++ ++ I + + +++++++++I+FFSFFYTAITFNP+E+AD Sbjct: 121 TIAICIVQSLALAKFLLSMNEGSEPILVWENPGVPFYLLCVLSFTTGTAFIMWVGEQISEHGIGNGMSLIIFASIIAGMPNAMINLLRLIDTGEISIFKFGILMAVFVFVVGGTILVTTGQRRIPIQYPRQVKGRAVMGNQRSYLPLKVNQAGVIPIIFASSLLMIPNMLASTVDVPIVSKIFGEWLAQGTWMYSLVFSVMILFFSFFYTAITFNPIEMAD 341
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A2A5DC72_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5DC72_9BACT) HSP 1 Score: 250 bits (639), Expect = 5.440e-78 Identity = 134/221 (60.63%), Postives = 171/221 (77.38%), Query Frame = 1 Query: 1 TIGLCLVQSVAIAMFLQSQGPEIVP-----NPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648 TIGLC+VQ++ + +FL+ P +PG+GF LLC+++FTTGTAF+MWLGEQISEHGIGNGIS+IIF SIIS MPAA+ NL+R+I + +V+IF +L+ + V VV G I+VT GQRR+PVQYPRQV+GR+V G QR+YLPLRVNQAGVIPIIFASSLLM+PGM+A N++ + I Q ++ +A +IVFFSFFYTAITFNPVE+AD Sbjct: 146 TIGLCVVQAIGVGVFLKGMNTPDAPILMFADPGLGFYLLCILSFTTGTAFLMWLGEQISEHGIGNGISVIIFASIISGMPAAMANLLRLINSGEVSIFKFGILMAVFVFVVAGTIMVTVGQRRIPVQYPRQVKGRQVSGSQRNYLPLRVNQAGVIPIIFASSLLMIPGMVATNIDVPIIQTIFVDWFGYGQWPYSAAFAAMIVFFSFFYTAITFNPVEIAD 366
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Match: A0A7Y5C967_9BACT (Protein translocase subunit SecY n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C967_9BACT) HSP 1 Score: 241 bits (614), Expect = 1.530e-74 Identity = 129/220 (58.64%), Postives = 165/220 (75.00%), Query Frame = 1 Query: 1 TIGLCLVQSVAIAMFLQSQGPE----IVPNPGIGFILLCVVTFTTGTAFIMWLGEQISEHGIGNGISLIIFTSIISSMPAAIVNLIRMIGTNQVNIFTGIVLVFLMVVVVMGAILVTTGQRRVPVQYPRQVRGRRVMGGQRSYLPLRVNQAGVIPIIFASSLLMLPGMLAQNLNSGTLALIINQIASPDQLVHNILYAILIVFFSFFYTAITFNPVELAD 648 TI LC++QS+ +A FL+ + IV + GIGF ++C+V FTTGTAFIMWLGEQISE+GIGNG+SLIIF I +S+PAA+++L ++ T Q++ + L MVVVV G IL+TT QRR+PVQYPRQV+GR++ GG R+YLPLRVNQAGVIPIIFASSLLMLPGML LNS + + +NI YA+LI+FF FFYTAITFNP+E+A+ Sbjct: 121 TIALCIIQSIGVATFLRGMNAQSEVPIVTSTGIGFYIICIVAFTTGTAFIMWLGEQISEYGIGNGMSLIIFAGIAASLPAALMDLATLLRTRQISWIAVLFLFAAMVVVVAGVILITTAQRRIPVQYPRQVKGRKMTGGARTYLPLRVNQAGVIPIIFASSLLMLPGMLGSALNSPAIDRFFETYFAWHGWAYNITYAVLIMFFCFFYTAITFNPIEMAE 340 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103069.651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103069.651.1 >prot_M-pyrifera_M_contig103069.651.1 ID=prot_M-pyrifera_M_contig103069.651.1|Name=mRNA_M-pyrifera_M_contig103069.651.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp TIGLCLVQSVAIAMFLQSQGPEIVPNPGIGFILLCVVTFTTGTAFIMWLGback to top mRNA from alignment at M-pyrifera_M_contig103069:5..652+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103069.651.1 ID=mRNA_M-pyrifera_M_contig103069.651.1|Name=mRNA_M-pyrifera_M_contig103069.651.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig103069:5..652+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103069:5..652+ >mRNA_M-pyrifera_M_contig103069.651.1 ID=mRNA_M-pyrifera_M_contig103069.651.1|Name=mRNA_M-pyrifera_M_contig103069.651.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig103069:5..652+ (Macrocystis pyrifera P11B4 male)back to top |