mRNA_M-pyrifera_M_contig103054.644.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig103054.644.1
Unique NamemRNA_M-pyrifera_M_contig103054.644.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig103054.644.1 vs. uniprot
Match: A0A6P7KSG7_BETSP (uncharacterized protein si:dkey-256h2.1 n=1 Tax=Betta splendens TaxID=158456 RepID=A0A6P7KSG7_BETSP)

HSP 1 Score: 184 bits (467), Expect = 2.650e-51
Identity = 98/199 (49.25%), Postives = 128/199 (64.32%), Query Frame = 1
Query:    1 CTFQLKLDASWAKPWVPSLTLR--LSNPSQHT----PPSRSLTPLFNGNFVFNSSYNNR-DPVEVEVPSRGVRRAQLITRITGHGYDNNGCGEFCSTSHVFEINSNLNLTLTFDHAGSLFGSTFRVIDGVEPNEHGTWTYGRDGWCDGWDVRPWVVDIPMH-EISGDSVRVKYYGLYDDKTPNPTHDPGYMIVSSWIAW 573
            C F +K  A WAKPWV SL LR  +SN + H      P R++ PL++G   F+ +YN R  P++  VPS   ++ +L   ITGHG D NGCGEFC TSH F IN+  N TL+FD AG+  G T RV DG  PNEHGTW YGR GWCDG  V PW +DI    ++SG +  V Y+GL+D K P+P+  PGY+I+ S++ +
Sbjct:  474 CNFTMK-TAPWAKPWVVSLNLRFSVSNQTGHRLETLRPFRAV-PLYSGG-TFDKNYNKRYQPIKFSVPSSSTKKVELFAVITGHGSDENGCGEFCVTSHHFLINAAFNNTLSFDSAGTALGCTQRVKDGAVPNEHGTWLYGRGGWCDGLQVDPWRIDITKQLDLSGLNT-VIYFGLFDGKDPDPSQQPGYIIMQSFLIF 668          
BLAST of mRNA_M-pyrifera_M_contig103054.644.1 vs. uniprot
Match: A0A0S7IF30_9TELE (PNGF (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7IF30_9TELE)

HSP 1 Score: 174 bits (441), Expect = 2.780e-51
Identity = 94/200 (47.00%), Postives = 120/200 (60.00%), Query Frame = 1
Query:    1 CTFQLKLDASWAKPWVPSLTLRLSNPSQHTPPSRS------LTPLFNGNFVFNSSYNNR-DPVEVEVPSRGVRRAQLITRITGHGYDNNGCGEFCSTSHVFEINSNLNLTLTFDHAGSLFGSTFRVIDGVEPNEHGTWTYGRDGWCDGWDVRPWVVDIP--MHEISGDSVRVKYYGLYDDKTPNPTHDPGYMIVSSWIAW 573
            CTF +K    WA PWV SL LR S    HT    +      +TPLF+G   F+ +YN R  P ++ +PS   ++ +L   ITGHG D NGCGEFC TSH F IN   N T TFD AG+  G T RV DG  PNEHGTW YGR GWCDG  V PW VD+   ++    DS  + Y+G ++ + PNP   PGY+I+SS++ +
Sbjct:   48 CTFTMK-TVPWAMPWVASLNLRFSV-RNHTDEDVAKLHPFKVTPLFSGG-TFDKNYNKRYQPTKILIPS-STKKVELYAVITGHGSDENGCGEFCVTSHHFLINGVHNNTHTFDTAGTALGCTMRVKDGAVPNEHGTWLYGRGGWCDGLQVDPWRVDVTKQLNMSDFDSNTIVYFGWFNGQDPNPAQKPGYIIMSSFLIF 243          
BLAST of mRNA_M-pyrifera_M_contig103054.644.1 vs. uniprot
Match: W5MYU2_LEPOC (Uncharacterized LOC102690549 n=3 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MYU2_LEPOC)

HSP 1 Score: 182 bits (462), Expect = 1.730e-50
Identity = 94/199 (47.24%), Postives = 117/199 (58.79%), Query Frame = 1
Query:    1 CTFQLKLDASWAKPWVPSLTLRLSNPSQHTPPSRS-------LTPLFNGNFVFNSSYNNR-DPVEVEVPSRGVRRAQLITRITGHGYDNNGCGEFCSTSHVFEINSNLNLTLTFDHAGSLFGSTFRVIDGVEPNEHGTWTYGRDGWCDGWDVRPWVVDIPMHEISGDSVRVKYYGLYDDKTPNPTHDPGYMIVSSWIAW 573
            CTF +K    WAKPWV SL LR    S       S       L PL+NG   F+ +YN +  PV   VP+  VR+ ++   ITGHG D+NGCGEFC TSH F INS  N +  F+ AG+ FG    V +GV PNEHGTW YGR GWCDG  V PW +DI        S  + Y+GL+D K PNP  DPGY+I+ S++ +
Sbjct:  493 CTFSMK-TVPWAKPWVASLNLRFGKSSHSDFEKHSGDLSPYLLKPLYNGG-TFDKNYNKKYQPVNFTVPT-AVRKVEIYAVITGHGSDDNGCGEFCVTSHHFLINSKFNHSKVFEKAGTAFGCAEAVKEGVVPNEHGTWLYGRGGWCDGLQVTPWRIDITSQLNMNGSNTILYFGLFDGKDPNPARDPGYIIMYSYLVF 688          
BLAST of mRNA_M-pyrifera_M_contig103054.644.1 vs. uniprot
Match: A0A1A8DFT0_9TELE (N-glycanase_N domain-containing protein (Fragment) n=2 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8DFT0_9TELE)

HSP 1 Score: 178 bits (451), Expect = 3.700e-50
Identity = 99/200 (49.50%), Postives = 124/200 (62.00%), Query Frame = 1
Query:    1 CTFQLKLDASWAKPWVPSLTLRLSNPSQ-HTPPSRSL-----TPLFNGNFVFNSSYNNRD-PVEVEVPSRGVRRAQLITRITGHGYDNNGCGEFCSTSHVFEINSNLNLTLTFDHAGSLFGSTFRVIDGVEPNEHGTWTYGRDGWCDGWDVRPWVVDIPMH-EIS-GDSVRVKYYGLYDDKTPNPTHDPGYMIVSSWIAW 573
            CTF LK    WA PW+ SL+LR S  +Q     +R L      PLF+G   F+ SYN R  P ++ +P +  ++ +L   ITGHG D NGCGEFC TSH F INS  N TLTFD AG+  G T RV DG  PNEHGTW YGR GWCDG  V PW VDI    ++S  +S  V Y+GL+D   P+P   PGY+I+SS++ +
Sbjct:  297 CTFTLK-TVPWAMPWIASLSLRFSISNQTDVDGARKLHPFRVMPLFSGG-TFDKSYNKRYWPTKLPIP-KSSKKVELYAVITGHGSDENGCGEFCVTSHHFLINSIYNNTLTFDSAGTALGCTMRVKDGAVPNEHGTWLYGRGGWCDGLQVDPWRVDITKQLDLSESESNTVVYFGLFDGVDPDPAQQPGYIIMSSFLIF 493          
BLAST of mRNA_M-pyrifera_M_contig103054.644.1 vs. uniprot
Match: UPI0018D8CE0F (uncharacterized protein LOC119729686 isoform X1 n=2 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8CE0F)

HSP 1 Score: 181 bits (460), Expect = 3.860e-50
Identity = 94/193 (48.70%), Postives = 120/193 (62.18%), Query Frame = 1
Query:    1 CTFQLKLDASWAKPWVPSLTLRLSNPS-QHTPPSRSLTPLFNGNFVFNSSYN-NRDPVEVEVPSRGVRRAQLITRITGHGYDNNGCGEFCSTSHVFEINSNLNLTLTFDHAGSLFGSTFRVIDGVEPNEHGTWTYGRDGWCDGWDVRPWVVDIPMHEISGDSVRVKYYGLYDDKTPNPTHDPGYMIVSSWIAW 573
            CTF +K    WAK W PSL LR S  S +       +TPLF G   FN SYN N  P    VP+  V++ Q+   ITGHG DNNGCGEFC TSH F +N + N  +TF +AG+  G   R   GVEPNEHGTW YGRDGWCDG +V PWV ++     SG +  + Y+G ++ K PNPT +PGY+I+ S++ +
Sbjct:  515 CTFTMK-TVPWAKAWKPSLNLRFSKDSTEGLLRPYKITPLFRGG-TFNKSYNQNYKPHFFTVPA-DVKKVQVYAAITGHGSDNNGCGEFCVTSHHFVVNGHYN-NITFSNAGTALGCALRTPTGVEPNEHGTWLYGRDGWCDGREVDPWVFNVTAQLTSGQN-NITYFGWFEGKDPNPTENPGYIIMYSYLVF 702          
BLAST of mRNA_M-pyrifera_M_contig103054.644.1 vs. uniprot
Match: A0A8C6NSL4_NOTFU (Si:dkey-256h2.1 n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6NSL4_NOTFU)

HSP 1 Score: 181 bits (458), Expect = 4.350e-50
Identity = 100/199 (50.25%), Postives = 125/199 (62.81%), Query Frame = 1
Query:    1 CTFQLKLDASWAKPWVPSLTLRLSNPSQHTPPSRSL-----TPLFNGNFVFNSSYNNRD-PVEVEVPSRGVRRAQLITRITGHGYDNNGCGEFCSTSHVFEINSNLNLTLTFDHAGSLFGSTFRVIDGVEPNEHGTWTYGRDGWCDGWDVRPWVVDIPMH-EIS-GDSVRVKYYGLYDDKTPNPTHDPGYMIVSSWIAW 573
            CTF LK    WA PW+ SL+LR S  +Q T  +R L      PLF+G   F+ SYN R  P ++ +P +  ++ +L   ITGHG D NGCGEFC TSH F INS  N TLTFD AG+  G T RV DG  PNEHGTW YGR GWCDG  V PW VDI    ++S  +S  V Y+GL+D   P+P   PGY+I+SS++ +
Sbjct:  460 CTFTLK-TVPWAMPWIASLSLRFSISNQ-TDGARKLHPFRVMPLFSGG-TFDKSYNKRYWPTKLPIP-KSSKKVELYAVITGHGSDENGCGEFCVTSHHFLINSIYNNTLTFDSAGTALGCTMRVKDGAVPNEHGTWLYGRGGWCDGLQVDPWRVDITKQLDLSESESNTVVYFGLFDGMDPDPAQQPGYIIMSSFLIF 654          
BLAST of mRNA_M-pyrifera_M_contig103054.644.1 vs. uniprot
Match: UPI001F083458 (uncharacterized protein si:dkey-256h2.1 n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F083458)

HSP 1 Score: 181 bits (458), Expect = 5.560e-50
Identity = 95/199 (47.74%), Postives = 122/199 (61.31%), Query Frame = 1
Query:    1 CTFQLKLDASWAKPWVPSLTLRLSNPSQHTPPSRSLTP-----LFNGNFVFNSSYNNR-DPVEVEVPSRGVRRAQLITRITGHGYDNNGCGEFCSTSHVFEINSNLNLTLTFDHAGSLFGSTFRVIDGVEPNEHGTWTYGRDGWCDGWDVRPWVVDIPMH-EISG-DSVRVKYYGLYDDKTPNPTHDPGYMIVSSWIAW 573
            CTF +K  A WA PWV SL LR S+ +Q   P   L P     L+ G   F+ SYN + +P++  VP+   ++ +L T ITGHG D NGCGEFC TSH F +N   N T  FD AGS  G   RV +G  PNEHGTW YGR GWCDG  V PW +DI    +ISG ++  + Y+GLY    PNP HDPGY+++ S++ +
Sbjct:  480 CTFTMKTVA-WAMPWVVSLNLRFSHINQSGNPVDKLYPFNLLSLYRGG-TFDKSYNKKYEPIKFTVPA-STKKVELYTVITGHGSDENGCGEFCVTSHHFLVNGVFNNTRIFDSAGSALGCAMRVREGAVPNEHGTWLYGRGGWCDGLQVNPWRIDITKQVDISGYEANTLLYFGLYGGMDPNPAHDPGYIVMFSYLVF 675          
BLAST of mRNA_M-pyrifera_M_contig103054.644.1 vs. uniprot
Match: A0A6F9DHP7_9ASCI (Uncharacterized protein LOC100179023 n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DHP7_9ASCI)

HSP 1 Score: 181 bits (458), Expect = 6.550e-50
Identity = 98/204 (48.04%), Postives = 120/204 (58.82%), Query Frame = 1
Query:    1 CTFQLKLDASWAKPWVPSLTLR-LSNPSQHT-----------PPSRSLTPLFNGNFVFNSSYN-NRDPVEVEVPSRGVRRAQLITRITGHGYDNNGCGEFCSTSHVFEINSNLNLTLTFDHAGSLFGSTFRVIDGVEPNEHGTWTYGRDGWCDGWDVRPWVVDIPMHEISGDSVRVKYYGLYDDKTPNPTHDPGYMIVSSWIAW 573
            CTFQLK+ A WAK WV +L LR +  P               P + S+ PLF G   F+ +YN N  P + E+PS GV+  Q+   ITGHG DNN C EFC TSH F IN N     TF +AG+  G   RV  GV PNEHGTW YGRDGWCDG  V PWV+DI M   S  S  V Y GL++ K PNPT +PG + + S++ +
Sbjct:  490 CTFQLKMTAWWAKAWVATLNLRFVQKPHSFAVLEKWSNNMVGPYAYSVVPLFQGG-TFDKTYNQNYKPYQFEIPS-GVKAVQIYAVITGHGSDNNNCAEFCVTSHHFSIN-NKTYIRTFTNAGTPLGCAHRVPQGVVPNEHGTWLYGRDGWCDGQQVDPWVIDITMDVKSSSSNTVTYKGLFNGKDPNPTQNPGVIKMVSYLVY 690          
BLAST of mRNA_M-pyrifera_M_contig103054.644.1 vs. uniprot
Match: UPI001455825B (uncharacterized protein LOC117288432 isoform X1 n=2 Tax=Asterias rubens TaxID=7604 RepID=UPI001455825B)

HSP 1 Score: 181 bits (459), Expect = 7.670e-50
Identity = 92/191 (48.17%), Postives = 121/191 (63.35%), Query Frame = 1
Query:    1 CTFQLKLDASWAKPWVPSLTLRLSNPSQHTPPSRSLTPLFNGNFVFNSSYN-NRDPVEVEVPSRGVRRAQLITRITGHGYDNNGCGEFCSTSHVFEINSNLNLTLTFDHAGSLFGSTFRVIDGVEPNEHGTWTYGRDGWCDGWDVRPWVVDIPMHEISGDSVRVKYYGLYDDKTPNPTHDPGYMIVSSWIA 570
            CT  +K  A WAK W PSL LR S  S       ++TPLF G   F+ +YN N  P    + S  +++ Q+   ITGHG DNNGCGEFC TSH F +N + N  +TFD+AG+  G   R   GVEPNEHGTW YGRDGWCDG +V PWV DI +  + G++ ++ Y+G +D K PNPT +PG +I+ S++ 
Sbjct:  554 CTLTMKTVA-WAKAWKPSLNLRFSVDSAAVVKPFNITPLFQGG-TFDKNYNKNYKPFYFTISS-DIKKVQVYAVITGHGSDNNGCGEFCVTSHHFIVNGHPN-NITFDNAGTPLGCALRTPTGVEPNEHGTWLYGRDGWCDGREVDPWVFDITLQTVIGEN-KISYFGWFDGKDPNPTSNPGNIIMYSYLV 739          
BLAST of mRNA_M-pyrifera_M_contig103054.644.1 vs. uniprot
Match: A0A8C2WH22_CYCLU (Si:dkey-256h2.1 n=2 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C2WH22_CYCLU)

HSP 1 Score: 179 bits (454), Expect = 1.710e-49
Identity = 94/199 (47.24%), Postives = 122/199 (61.31%), Query Frame = 1
Query:    1 CTFQLKLDASWAKPWVPSLTLRLSNPSQHTPPSRSL-----TPLFNGNFVFNSSYNNR-DPVEVEVPSRGVRRAQLITRITGHGYDNNGCGEFCSTSHVFEINSNLNLTLTFDHAGSLFGSTFRVIDGVEPNEHGTWTYGRDGWCDGWDVRPWVVDIPMHEISGDSV--RVKYYGLYDDKTPNPTHDPGYMIVSSWIAW 573
            CT  +K    WA PWV SL LR S  ++     + L     TPL++G   F+ +YN R  P EV VP+   R+ +L   +T HGYD+NGCGEFC TSH F IN   N TLTFD AG+  G T RV +G  PNEHGTW YGR GWCDG+ V PW  D+     + +S    V Y+GL+  K PNP+ +PGY+I+SS++ +
Sbjct:  463 CTLTMK-TVPWAMPWVVSLNLRFSVNNRTDYDVKKLRPFRVTPLYSGG-TFDKNYNKRYRPTEVSVPA-STRKVELYAVVTAHGYDDNGCGEFCVTSHHFLINDVFNNTLTFDSAGTPLGCTLRVKEGAVPNEHGTWLYGRGGWCDGFQVDPWRTDVTKQLNASESEPNTVVYFGLFQGKDPNPSKEPGYIIMSSFLVF 658          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103054.644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P7KSG7_BETSP2.650e-5149.25uncharacterized protein si:dkey-256h2.1 n=1 Tax=Be... [more]
A0A0S7IF30_9TELE2.780e-5147.00PNGF (Fragment) n=1 Tax=Poeciliopsis prolifica Tax... [more]
W5MYU2_LEPOC1.730e-5047.24Uncharacterized LOC102690549 n=3 Tax=Lepisosteus o... [more]
A0A1A8DFT0_9TELE3.700e-5049.50N-glycanase_N domain-containing protein (Fragment)... [more]
UPI0018D8CE0F3.860e-5048.70uncharacterized protein LOC119729686 isoform X1 n=... [more]
A0A8C6NSL4_NOTFU4.350e-5050.25Si:dkey-256h2.1 n=1 Tax=Nothobranchius furzeri Tax... [more]
UPI001F0834585.560e-5047.74uncharacterized protein si:dkey-256h2.1 n=1 Tax=Hy... [more]
A0A6F9DHP7_9ASCI6.550e-5048.04Uncharacterized protein LOC100179023 n=1 Tax=Phall... [more]
UPI001455825B7.670e-5048.17uncharacterized protein LOC117288432 isoform X1 n=... [more]
A0A8C2WH22_CYCLU1.710e-4947.24Si:dkey-256h2.1 n=2 Tax=Cyclopterus lumpus TaxID=8... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig103054contigM-pyrifera_M_contig103054:14..598 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score184.9
Seed ortholog evalue3.6e-44
Seed eggNOG ortholog7918.ENSLOCP00000013551
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Si dkey-256h2.1
EggNOG OGs28MF2@1,2QTYJ@2759,39PP2@33154,3BKXU@33208,3CSSD@33213,48DC7@7711,498YQ@7742,49T0Y@7898
COG Functional cat.S
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
Exons1
Model size585
Cds size585
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815535.1880956-CDS-M-pyrifera_M_contig103054:13..5981622815535.1880956-CDS-M-pyrifera_M_contig103054:13..598Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103054 14..598 +
1692277453.3397603-CDS-M-pyrifera_M_contig103054:13..5981692277453.3397603-CDS-M-pyrifera_M_contig103054:13..598Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig103054 14..598 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig103054.644.1prot_M-pyrifera_M_contig103054.644.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig103054 14..598 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig103054.644.1

>prot_M-pyrifera_M_contig103054.644.1 ID=prot_M-pyrifera_M_contig103054.644.1|Name=mRNA_M-pyrifera_M_contig103054.644.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp
CTFQLKLDASWAKPWVPSLTLRLSNPSQHTPPSRSLTPLFNGNFVFNSSY
NNRDPVEVEVPSRGVRRAQLITRITGHGYDNNGCGEFCSTSHVFEINSNL
NLTLTFDHAGSLFGSTFRVIDGVEPNEHGTWTYGRDGWCDGWDVRPWVVD
IPMHEISGDSVRVKYYGLYDDKTPNPTHDPGYMIVSSWIAWEEE*
back to top

mRNA from alignment at M-pyrifera_M_contig103054:14..598+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig103054.644.1 ID=mRNA_M-pyrifera_M_contig103054.644.1|Name=mRNA_M-pyrifera_M_contig103054.644.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig103054:14..598+ (Macrocystis pyrifera P11B4 male)
TGCACATTCCAACTCAAACTTGACGCTTCTTGGGCAAAACCATGGGTTCC TTCTCTCACATTACGCCTTTCCAACCCCTCCCAACACACCCCACCGTCCC GCTCTCTCACTCCTCTCTTCAACGGGAATTTTGTTTTCAACTCTTCGTAC AACAACCGTGATCCTGTGGAGGTTGAAGTACCAAGTAGGGGGGTGAGACG TGCGCAGCTCATCACACGCATCACTGGGCATGGGTATGACAATAACGGAT GTGGAGAGTTTTGTTCCACTTCTCACGTGTTTGAAATCAACTCAAACCTC AACCTCACCCTCACGTTTGACCACGCAGGCAGCTTGTTTGGATCCACCTT TCGTGTCATCGATGGTGTGGAACCAAATGAGCATGGCACATGGACGTATG GGAGAGATGGATGGTGTGATGGGTGGGACGTGAGGCCATGGGTGGTAGAC ATTCCTATGCATGAAATCAGTGGTGATAGTGTGAGGGTGAAGTACTACGG GTTGTATGATGACAAGACTCCAAACCCGACACATGATCCAGGATATATGA TTGTGTCGAGTTGGATTGCTTGGGAAGAAGAGTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig103054:14..598+

>mRNA_M-pyrifera_M_contig103054.644.1 ID=mRNA_M-pyrifera_M_contig103054.644.1|Name=mRNA_M-pyrifera_M_contig103054.644.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig103054:14..598+ (Macrocystis pyrifera P11B4 male)
TGCACATTCCAACTCAAACTTGACGCTTCTTGGGCAAAACCATGGGTTCC
TTCTCTCACATTACGCCTTTCCAACCCCTCCCAACACACCCCACCGTCCC
GCTCTCTCACTCCTCTCTTCAACGGGAATTTTGTTTTCAACTCTTCGTAC
AACAACCGTGATCCTGTGGAGGTTGAAGTACCAAGTAGGGGGGTGAGACG
TGCGCAGCTCATCACACGCATCACTGGGCATGGGTATGACAATAACGGAT
GTGGAGAGTTTTGTTCCACTTCTCACGTGTTTGAAATCAACTCAAACCTC
AACCTCACCCTCACGTTTGACCACGCAGGCAGCTTGTTTGGATCCACCTT
TCGTGTCATCGATGGTGTGGAACCAAATGAGCATGGCACATGGACGTATG
GGAGAGATGGATGGTGTGATGGGTGGGACGTGAGGCCATGGGTGGTAGAC
ATTCCTATGCATGAAATCAGTGGTGATAGTGTGAGGGTGAAGTACTACGG
GTTGTATGATGACAAGACTCCAAACCCGACACATGATCCAGGATATATGA
TTGTGTCGAGTTGGATTGCTTGGGAAGAAGAGTAGTGCACATTCCAACTC
AAACTTGACGCTTCTTGGGCAAAACCATGGGTTCCTTCTCTCACATTACG
CCTTTCCAACCCCTCCCAACACACCCCACCGTCCCGCTCTCTCACTCCTC
TCTTCAACGGGAATTTTGTTTTCAACTCTTCGTACAACAACCGTGATCCT
GTGGAGGTTGAAGTACCAAGTAGGGGGGTGAGACGTGCGCAGCTCATCAC
ACGCATCACTGGGCATGGGTATGACAATAACGGATGTGGAGAGTTTTGTT
CCACTTCTCACGTGTTTGAAATCAACTCAAACCTCAACCTCACCCTCACG
TTTGACCACGCAGGCAGCTTGTTTGGATCCACCTTTCGTGTCATCGATGG
TGTGGAACCAAATGAGCATGGCACATGGACGTATGGGAGAGATGGATGGT
GTGATGGGTGGGACGTGAGGCCATGGGTGGTAGACATTCCTATGCATGAA
ATCAGTGGTGATAGTGTGAGGGTGAAGTACTACGGGTTGTATGATGACAA
GACTCCAAACCCGACACATGATCCAGGATATATGATTGTGTCGAGTTGGA
TTGCTTGGGAAGAAGAGTAG
back to top