mRNA_M-pyrifera_M_contig103038.637.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig103038.637.1 vs. uniprot
Match: A0A067LC60_JATCU (C3H1-type domain-containing protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LC60_JATCU) HSP 1 Score: 63.9 bits (154), Expect = 1.010e-9 Identity = 29/79 (36.71%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 22 VGSIRAHEKVLTCVALSDDGRTCVTGSVDQTVKVWDVQKLHCSQVISGHSSAVSSVGLIGQCAISACTGADEPVRLWDI 258 V +IRAH+ +TC+ + +G+ +GS+D TVKVWD++ L C+Q++ GH+ V S+ C ++ D V+ W I Sbjct: 201 VANIRAHKMPITCLNIGFNGKFLYSGSMDSTVKVWDLETLQCNQILEGHNDVVMSLLSWDNCLLTC--SLDHTVKFWVI 277
BLAST of mRNA_M-pyrifera_M_contig103038.637.1 vs. uniprot
Match: D2VI77_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VI77_NAEGR) HSP 1 Score: 62.0 bits (149), Expect = 5.400e-9 Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 1 Query: 1 DLGKNAEVGSIRAHEKVLTCVALSDDGRTCVTGSVDQTVKVWDVQKLHCSQVISGHSSAVSS 186 DL +++VG +R H+ + C+ L+ DG+ C+TGS D TVK WD++ C Q S +SS S+ Sbjct: 111 DLRTSSKVGKLRGHKDNIRCLKLTTDGKNCITGSTDGTVKYWDLRNQRCLQTFSFNSSKTST 172
BLAST of mRNA_M-pyrifera_M_contig103038.637.1 vs. uniprot
Match: A0A0K6GCL9_9AGAM (Kinesin-like protein KIF21B n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6GCL9_9AGAM) HSP 1 Score: 59.7 bits (143), Expect = 3.630e-8 Identity = 36/95 (37.89%), Postives = 51/95 (53.68%), Query Frame = 1 Query: 22 VGSIRAHEKVLTCVALSDDGRTCVTGSVDQTVKVWDVQKLHCSQV-ISGHSSAVSSVGLI-GQCAISACTGADEPVRLWDISCAAPLPSLPSLSP 300 VG +R H + A S D R VTGSVD+T+ VWD+ K V GH+ V+SV L G + +C D +R+W+ CA +P+L+P Sbjct: 1223 VGPLRGHTNQIISCAFSVDSRYLVTGSVDRTICVWDLNKAELVGVPFRGHARDVTSVALFPGASRVVSCCYYDATIRIWNTHCAM----IPALAP 1313
BLAST of mRNA_M-pyrifera_M_contig103038.637.1 vs. uniprot
Match: A0A410FUV8_9BACT (Uncharacterized protein n=1 Tax=Candidatus Bipolaricaulis sibiricus TaxID=2501609 RepID=A0A410FUV8_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 7.250e-8 Identity = 28/75 (37.33%), Postives = 43/75 (57.33%), Query Frame = 1 Query: 40 HEKVLTCVALSDDGRTCVTGSVDQTVKVWDVQKLHCSQVISGHSSAVSSVGLIGQCAISACTGADEPV-RLWDIS 261 HE VA+S DGR ++GS+D+T ++WD + HC V+ GH + V VG C + T +D V R+W ++ Sbjct: 230 HESCAITVAVSPDGRLYLSGSLDETARLWDAETGHCVAVLEGHGAVVQEVGF-SPCGMLIVTASDNGVVRIWRVA 303
BLAST of mRNA_M-pyrifera_M_contig103038.637.1 vs. uniprot
Match: UPI000B76F7ED (zinc finger CCCH domain-containing protein 48-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B76F7ED) HSP 1 Score: 58.5 bits (140), Expect = 8.070e-8 Identity = 25/79 (31.65%), Postives = 44/79 (55.70%), Query Frame = 1 Query: 16 AEVGSIRAHEKVLTCVALSDDGRTCVTGSVDQTVKVWDVQKLHCSQVISGHSSAVSSVGLIGQCAISACTGADEPVRLW 252 A+V ++R H+K + C+ + + +GS+D TV VWD++ L C Q ++GH V S+ QC ++ D ++ W Sbjct: 193 AKVATLRGHQKAVVCLNIGSGVNSLYSGSMDNTVTVWDLETLQCKQTLNGHKDVVMSLLSWDQCLLTC--SLDHTMKFW 269
BLAST of mRNA_M-pyrifera_M_contig103038.637.1 vs. uniprot
Match: A0A6A6MYE3_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MYE3_HEVBR) HSP 1 Score: 58.5 bits (140), Expect = 8.300e-8 Identity = 24/67 (35.82%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 16 AEVGSIRAHEKVLTCVALSDDGRTCVTGSVDQTVKVWDVQKLHCSQVISGHSSAVSSVGLIGQCAIS 216 A V ++R H+KV+ C+ + + +GS+D TVKVWD++ + C Q ++GH + V S+ QC ++ Sbjct: 227 AMVATLRGHKKVVVCLNVGSGVHSLYSGSMDNTVKVWDLETMQCKQTLNGHKNVVMSLLSWDQCLLT 293
BLAST of mRNA_M-pyrifera_M_contig103038.637.1 vs. uniprot
Match: UPI001D03B3E7 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D03B3E7) HSP 1 Score: 56.2 bits (134), Expect = 5.870e-7 Identity = 23/54 (42.59%), Postives = 33/54 (61.11%), Query Frame = 1 Query: 1 DLGKNAEVGSIRAHEKVLTCVALSDDGRTCVTGSVDQTVKVWDVQKLHCSQVIS 162 D + ++G +R H+ + CV LS DG+ C+TGS D TVK WD++ C Q S Sbjct: 278 DFRTSTKIGKLRGHKDNIRCVLLSVDGKKCITGSTDGTVKCWDLKTQRCLQTYS 331
BLAST of mRNA_M-pyrifera_M_contig103038.637.1 vs. uniprot
Match: A0A8H3A2C8_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3A2C8_9AGAM) HSP 1 Score: 55.5 bits (132), Expect = 1.100e-6 Identity = 35/96 (36.46%), Postives = 50/96 (52.08%), Query Frame = 1 Query: 25 GSIRAHEKVLTCVALSDDGRTCVTGSVDQTVKVWDVQKLHCSQV-ISGHSSAVSSVGLIGQCA-ISACTGADEPVRLWDISCAA-PLPSLPSLSPQ 303 G + H + A S D R VTGS+D+T+ VWD+ K V GH S V SV L + + +C DE +R+W+ CA P P+ P+ S + Sbjct: 924 GPLCGHTDKIISSAFSADSRYLVTGSLDRTICVWDLNKAELVGVPFRGHGSDVISVALFPDASRVVSCCYDDETIRIWNTHCAMIPTPAPPNSSAE 1019
BLAST of mRNA_M-pyrifera_M_contig103038.637.1 vs. uniprot
Match: UPI00148A7053 (NACHT domain- and WD repeat-containing protein 1 isoform X1 n=3 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A7053) HSP 1 Score: 55.1 bits (131), Expect = 1.530e-6 Identity = 24/76 (31.58%), Postives = 45/76 (59.21%), Query Frame = 1 Query: 40 HEKVLTCVALSDDGRTCVTGSVDQTVKVWDVQKLHCSQVISGHSSAVSSVGLIGQCAISACTGADEPVRLWDISCA 267 H+ ++TCVA++ DG+ ++G D VK+WD++ S+ GHS AV+S+ A + + D +++W ++ A Sbjct: 1217 HKCMITCVAVTSDGKIGMSGGTDGEVKLWDLETNTYSESFLGHSGAVASIEPASNGAFTVTSAEDRKIKVWSMTLA 1292
BLAST of mRNA_M-pyrifera_M_contig103038.637.1 vs. uniprot
Match: UPI001A8F8577 (CHAT domain-containing protein n=1 Tax=Phormidium pseudopriestleyi TaxID=1759527 RepID=UPI001A8F8577) HSP 1 Score: 54.7 bits (130), Expect = 2.000e-6 Identity = 29/85 (34.12%), Postives = 47/85 (55.29%), Query Frame = 1 Query: 19 EVGSIRAHEKVLTCVALSDDGRTCVTGSVDQTVKVWDVQKLHCSQVISGHSSAVSSV-----GLIGQCAISACTGADEPVRLWDI 258 EV ++ H + VA+S DGR +GS DQT+K+WD+QK + + GH+ V+SV G++ S D ++LW++ Sbjct: 393 EVTTLTGHSSGVKSVAISPDGRMIASGSFDQTIKLWDLQKGEFKKPLKGHTGTVTSVQFRQDGVLA----SGSFFPDGTIKLWEV 473 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig103038.637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig103038.637.1 >prot_M-pyrifera_M_contig103038.637.1 ID=prot_M-pyrifera_M_contig103038.637.1|Name=mRNA_M-pyrifera_M_contig103038.637.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp DLGKNAEVGSIRAHEKVLTCVALSDDGRTCVTGSVDQTVKVWDVQKLHCSback to top mRNA from alignment at M-pyrifera_M_contig103038:345..656- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig103038.637.1 ID=mRNA_M-pyrifera_M_contig103038.637.1|Name=mRNA_M-pyrifera_M_contig103038.637.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig103038:345..656- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig103038:345..656- >mRNA_M-pyrifera_M_contig103038.637.1 ID=mRNA_M-pyrifera_M_contig103038.637.1|Name=mRNA_M-pyrifera_M_contig103038.637.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig103038:345..656- (Macrocystis pyrifera P11B4 male)back to top |