mRNA_M-pyrifera_M_contig102465.525.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig102465.525.1
Unique NamemRNA_M-pyrifera_M_contig102465.525.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig102465.525.1 vs. uniprot
Match: A0A2E7KAD8_9PLAN (Histidine kinase domain-containing protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KAD8_9PLAN)

HSP 1 Score: 426 bits (1096), Expect = 6.050e-148
Identity = 215/220 (97.73%), Postives = 215/220 (97.73%), Query Frame = 1
Query:    1 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTIDDVLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEGVGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAETNSDRGVTFHLYWP 660
            DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTID VLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEG GLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAE N D GVTFHLYWP
Sbjct:  178 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTIDGVLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEGAGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAEQNPDSGVTFHLYWP 397          
BLAST of mRNA_M-pyrifera_M_contig102465.525.1 vs. uniprot
Match: A0A518A2F9_9PLAN (Sporulation kinase D n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A2F9_9PLAN)

HSP 1 Score: 356 bits (914), Expect = 2.650e-120
Identity = 173/220 (78.64%), Postives = 196/220 (89.09%), Query Frame = 1
Query:    1 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTIDDVLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEGVGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAETNSDRGVTFHLYWP 660
            +KLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQAL+TIGGQAYRVRDMIGDAMLFARPPAPRPE LS S T+ +V+ SLQEE++Q  VQ+ V+ A++L++ ADE QWKVVLSNLLLNSL AME GG++++ AS  E ESG  +HL++ID+G GL+EEER+HLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIA E N  RGVTFHLYWP
Sbjct:  178 EKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALATIGGQAYRVRDMIGDAMLFARPPAPRPELLSFSTTMQEVMDSLQEEVSQAGVQVVVDAADALTVLADEVQWKVVLSNLLLNSLHAMEPGGKLQVRASQSEIESGRILHLQIIDDGAGLSEEERVHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAVEPNRQRGVTFHLYWP 397          
BLAST of mRNA_M-pyrifera_M_contig102465.525.1 vs. uniprot
Match: A0A518I889_9PLAN (Sporulation kinase E n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I889_9PLAN)

HSP 1 Score: 330 bits (846), Expect = 8.420e-110
Identity = 160/220 (72.73%), Postives = 183/220 (83.18%), Query Frame = 1
Query:    1 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTIDDVLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEGVGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAETNSDRGVTFHLYWP 660
            DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLK ETDPERRQ+LSTIGGQAYRVRDMIGDAMLF RPP P P  L+L +T  +VL+SL E I+Q  +Q+ V I ES S++ADE QWKVVLSNLLLNSL  +E+GGQ++I +  L T +   +HLRV D+G GLT++ER HLFDPF+SARQAGRGLGFGLSKCWRI + HG +I AETN DRGVTFHL WP
Sbjct:  191 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKDETDPERRQSLSTIGGQAYRVRDMIGDAMLFGRPPVPNPSLLNLQKTAQEVLISLNETISQSGIQITVEIPESHSIWADEVQWKVVLSNLLLNSLNVLESGGQVRIISEELTTGASQSLHLRVTDDGPGLTDQEREHLFDPFFSARQAGRGLGFGLSKCWRIVSLHGGSIEAETNPDRGVTFHLIWP 410          
BLAST of mRNA_M-pyrifera_M_contig102465.525.1 vs. uniprot
Match: A0A517RBT6_9PLAN (Sporulation kinase D n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RBT6_9PLAN)

HSP 1 Score: 321 bits (823), Expect = 1.930e-106
Identity = 159/220 (72.27%), Postives = 178/220 (80.91%), Query Frame = 1
Query:    1 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTIDDVLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEGVGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAETNSDRGVTFHLYWP 660
            DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLK ETDPERR+AL+TIGGQAYRVRDMI DAMLF RPP PRP   +L QT ++VL SL E I   + QL V I ES S++ADETQWKVVLSNL+LNSL  +E GGQI+I +  L       +HLRVID G GLT++ER HLFDPF+SARQAGRGLGFGLSKCWRI + HG +I AETN D+GVTFHL WP
Sbjct:  182 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKGETDPERRRALTTIGGQAYRVRDMISDAMLFGRPPVPRPSLHNLKQTTEEVLASLDEAITHSESQLTVEIPESHSIWADETQWKVVLSNLILNSLNVLETGGQIRIVSEELTAGEKRSLHLRVIDNGPGLTDQEREHLFDPFFSARQAGRGLGFGLSKCWRIVSLHGGSIEAETNIDQGVTFHLIWP 401          
BLAST of mRNA_M-pyrifera_M_contig102465.525.1 vs. uniprot
Match: A0A517X2A7_9PLAN (Sporulation kinase E n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X2A7_9PLAN)

HSP 1 Score: 316 bits (810), Expect = 1.970e-104
Identity = 150/220 (68.18%), Postives = 184/220 (83.64%), Query Frame = 1
Query:    1 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTIDDVLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEGVGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAETNSDRGVTFHLYWP 660
            DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLK ETDP+RRQ+L+TIGGQAYR+RDMIGDAMLFARPPAP P +L+L +   +VL SL E+I++  V + + ++  L+++ADE QWKVVLSNL+LNSLQ ++ G  I+ISA  +   S   +H+RV+D+G GLTE+E+ HLFDPF+SARQAGRGLGFGLSKCWRI + HG +I AE N+DRG+TFHLYWP
Sbjct:  189 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKEETDPQRRQSLATIGGQAYRIRDMIGDAMLFARPPAPHPVSLNLQEMTQEVLNSLNEKISKAGVDVSIKLSSLLAIWADEVQWKVVLSNLILNSLQVLKTGDCIEISAEEMTQNSIRIMHIRVVDDGPGLTEQEKEHLFDPFFSARQAGRGLGFGLSKCWRIISLHGGSIEAEVNADRGMTFHLYWP 408          
BLAST of mRNA_M-pyrifera_M_contig102465.525.1 vs. uniprot
Match: A0A3D3R632_9PLAN (Histidine kinase domain-containing protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A0A3D3R632_9PLAN)

HSP 1 Score: 304 bits (779), Expect = 1.160e-99
Identity = 152/220 (69.09%), Postives = 173/220 (78.64%), Query Frame = 1
Query:    1 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTIDDVLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEGVGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAETNSDRGVTFHLYWP 660
            DKLEAMAEFAAGAGHEINNPVATI GRVQMLLK ETDPERRQ+L+TIGGQAYR+RDMIGDAMLF RPPAPRP  ++LS+TI+DV  SL E I    V L V+      L ADETQ KVV+SNL+LN L  +E GGQI ISA     ++ P +HL + D+G GL+E+E+ HLFDPFYSARQAGRGLGFGLSKCWRI   HG  I AET  +RGVTFHL+WP
Sbjct:  195 DKLEAMAEFAAGAGHEINNPVATIAGRVQMLLKQETDPERRQSLATIGGQAYRIRDMIGDAMLFGRPPAPRPTAVNLSKTINDVQHSLSEAIQDSGVLLTVDFPGVPCLRADETQLKVVISNLILNCLNVLEPGGQICISAKEKIVDAVPMVHLEITDDGPGLSEQEQEHLFDPFYSARQAGRGLGFGLSKCWRIVELHGGQIEAETCQERGVTFHLFWP 414          
BLAST of mRNA_M-pyrifera_M_contig102465.525.1 vs. uniprot
Match: A0A517VC83_9PLAN (Sporulation kinase E n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VC83_9PLAN)

HSP 1 Score: 301 bits (770), Expect = 2.360e-98
Identity = 149/220 (67.73%), Postives = 173/220 (78.64%), Query Frame = 1
Query:    1 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTIDDVLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEGVGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAETNSDRGVTFHLYWP 660
            DKLEAMAEFAAGAGHEINNPVATI GRVQMLLK ETDPERRQ+L+TIGGQAYR+RDMIGDAMLF RPPAPRP  ++LS+ ID+V  SL E I+  +V L V++  +  L+ADETQ KVV+SNL+ N L  +EAGGQI ISA     ++ P +HLR+ D G GL+E+E+ HLFDPFYSARQAGRGLGFGLSKCWRI   HG  I AE +   GVT HL WP
Sbjct:  191 DKLEAMAEFAAGAGHEINNPVATIAGRVQMLLKHETDPERRQSLATIGGQAYRIRDMIGDAMLFGRPPAPRPTAVNLSKAIDEVQQSLSEAIHTSEVLLTVDLPATACLWADETQLKVVISNLISNCLNVLEAGGQICISAEEETVDAVPMLHLRIKDNGPGLSEQEQKHLFDPFYSARQAGRGLGFGLSKCWRIVDLHGGQIEAEISQGHGVTLHLLWP 410          
BLAST of mRNA_M-pyrifera_M_contig102465.525.1 vs. uniprot
Match: A0A355GL87_9PLAN (Histidine kinase domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355GL87_9PLAN)

HSP 1 Score: 290 bits (741), Expect = 9.300e-96
Identity = 144/220 (65.45%), Postives = 174/220 (79.09%), Query Frame = 1
Query:    1 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTIDDVLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEGVGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAETNSDRGVTFHLYWP 660
            DKLEAMAEFAAGAGHEINNPVATIVGRVQMLL+ ETDPERRQ+L+TIGGQAYR+RDMIGDAMLF RPPAP    ++LS+ I+DV  SL E I    VQL V +++++ L ADETQ KVV+SNL+LN L  +E GG+I+I+A      +   +HL++ D+G GL+E+E+ HLFDPF+SARQAGRGLGFGLSKCWRI   H   I AET   RGVTFH++WP
Sbjct:   61 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLRHETDPERRQSLATIGGQAYRIRDMIGDAMLFGRPPAPCLSAVNLSKAIEDVQYSLSEAILTSGVQLMVTLSKAVCLQADETQLKVVISNLILNCLNILEPGGKIEIAAEEETVGTVSMLHLQISDDGPGLSEQEQEHLFDPFFSARQAGRGLGFGLSKCWRIIDLHRGRIEAETIPGRGVTFHIFWP 280          
BLAST of mRNA_M-pyrifera_M_contig102465.525.1 vs. uniprot
Match: A0A2E2CB97_9PLAN (Histidine kinase domain-containing protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2CB97_9PLAN)

HSP 1 Score: 290 bits (741), Expect = 7.460e-94
Identity = 144/220 (65.45%), Postives = 174/220 (79.09%), Query Frame = 1
Query:    1 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTIDDVLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEGVGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAETNSDRGVTFHLYWP 660
            DKLEAMAEFAAGAGHEINNPVATIVGRVQMLL+ ETDPERRQ+L+TIGGQAYR+RDMIGDAMLF RPPAP    ++LS+ I+DV  SL E I    VQL V +++++ L ADETQ KVV+SNL+LN L  +E GG+I+I+A      +   +HL++ D+G GL+E+E+ HLFDPF+SARQAGRGLGFGLSKCWRI   H   I AET   RGVTFH++WP
Sbjct:  200 DKLEAMAEFAAGAGHEINNPVATIVGRVQMLLRHETDPERRQSLATIGGQAYRIRDMIGDAMLFGRPPAPCLSAVNLSKAIEDVQYSLSEAILTSGVQLMVTLSKAVCLQADETQLKVVISNLILNCLNILEPGGKIEIAAEEETVGTVSMLHLQISDDGPGLSEQEQEHLFDPFFSARQAGRGLGFGLSKCWRIIDLHRGRIEAETIPGRGVTFHIFWP 419          
BLAST of mRNA_M-pyrifera_M_contig102465.525.1 vs. uniprot
Match: A0A4P5Y8K3_9BACT (Histidine kinase domain-containing protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A4P5Y8K3_9BACT)

HSP 1 Score: 249 bits (637), Expect = 1.180e-80
Identity = 125/219 (57.08%), Postives = 152/219 (69.41%), Query Frame = 1
Query:    4 KLEAMAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVRDMIGDAMLFARPPAPRPETLSLSQTIDDVLVSLQEEINQGKVQLEVNIAESLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLRVIDEGVGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAAETNSDRGVTFHLYWP 660
            KLEA+AEFAAGAGHEINNPVATIVGR ++LLK ET+PERRQAL TIG QA R+RDMIGD MLFARPP P  ++L+L +  D VL  L E +    + +   +   + + AD  Q ++V+SNLLLNS+ A   GG I +S S LE +S       V D GVGL+  ER HLFDPF+S RQAGRGLGFGL KCWRI  QHG  I  +++ D G TF + WP
Sbjct:   17 KLEALAEFAAGAGHEINNPVATIVGRAELLLKGETNPERRQALLTIGAQALRIRDMIGDLMLFARPPKPELQSLNLVEVADGVLRKLDETLRAKSLSVVRQVQSVVPIVADPVQLRIVISNLLLNSVNASAVGGSISVSCSSLEADSRRSAVFTVKDRGVGLSAVERKHLFDPFFSGRQAGRGLGFGLCKCWRIVEQHGGQIDCDSSEDDGTTFRVTWP 235          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102465.525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KAD8_9PLAN6.050e-14897.73Histidine kinase domain-containing protein n=6 Tax... [more]
A0A518A2F9_9PLAN2.650e-12078.64Sporulation kinase D n=2 Tax=Gimesia panareensis T... [more]
A0A518I889_9PLAN8.420e-11072.73Sporulation kinase E n=1 Tax=Gimesia fumaroli TaxI... [more]
A0A517RBT6_9PLAN1.930e-10672.27Sporulation kinase D n=1 Tax=Gimesia alba TaxID=25... [more]
A0A517X2A7_9PLAN1.970e-10468.18Sporulation kinase E n=2 Tax=Gimesia aquarii TaxID... [more]
A0A3D3R632_9PLAN1.160e-9969.09Histidine kinase domain-containing protein n=6 Tax... [more]
A0A517VC83_9PLAN2.360e-9867.73Sporulation kinase E n=1 Tax=Gimesia algae TaxID=2... [more]
A0A355GL87_9PLAN9.300e-9665.45Histidine kinase domain-containing protein (Fragme... [more]
A0A2E2CB97_9PLAN7.460e-9465.45Histidine kinase domain-containing protein n=3 Tax... [more]
A0A4P5Y8K3_9BACT1.180e-8057.08Histidine kinase domain-containing protein n=2 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102465contigM-pyrifera_M_contig102465:2..661 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score296.2
Seed ortholog evalue1.2e-77
Seed eggNOG ortholog344747.PM8797T_17714
Preferred namepilS
KEGG koko:K02668
KEGG Pathwayko02020,map02020
KEGG ModuleM00501
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Histidine kinase
EggNOG OGs2J037@203682,COG4191@1,COG4191@2
EC2.7.13.3
COG Functional cat.T
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02035
Exons1
Model size660
Cds size645
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815527.2263975-UTR-M-pyrifera_M_contig102465:1..161622815527.2263975-UTR-M-pyrifera_M_contig102465:1..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig102465 2..16 +
1692277449.854764-UTR-M-pyrifera_M_contig102465:1..161692277449.854764-UTR-M-pyrifera_M_contig102465:1..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig102465 2..16 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815527.2426765-CDS-M-pyrifera_M_contig102465:16..6611622815527.2426765-CDS-M-pyrifera_M_contig102465:16..661Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102465 17..661 +
1692277449.8697445-CDS-M-pyrifera_M_contig102465:16..6611692277449.8697445-CDS-M-pyrifera_M_contig102465:16..661Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102465 17..661 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102465.525.1prot_M-pyrifera_M_contig102465.525.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig102465 17..661 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig102465.525.1

>prot_M-pyrifera_M_contig102465.525.1 ID=prot_M-pyrifera_M_contig102465.525.1|Name=mRNA_M-pyrifera_M_contig102465.525.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=215bp
MAEFAAGAGHEINNPVATIVGRVQMLLKSETDPERRQALSTIGGQAYRVR
DMIGDAMLFARPPAPRPETLSLSQTIDDVLVSLQEEINQGKVQLEVNIAE
SLSLYADETQWKVVLSNLLLNSLQAMEAGGQIKISASPLETESGPFIHLR
VIDEGVGLTEEERIHLFDPFYSARQAGRGLGFGLSKCWRIATQHGATIAA
ETNSDRGVTFHLYWP
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mRNA from alignment at M-pyrifera_M_contig102465:2..661+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig102465.525.1 ID=mRNA_M-pyrifera_M_contig102465.525.1|Name=mRNA_M-pyrifera_M_contig102465.525.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig102465:2..661+ (Macrocystis pyrifera P11B4 male)
GATAAGCTGGAAGCGATGGCGGAATTTGCCGCCGGGGCCGGACATGAAAT CAATAACCCCGTAGCGACCATCGTCGGGCGGGTGCAGATGCTGCTCAAAT CAGAGACTGACCCCGAACGTCGGCAGGCCCTGTCGACAATTGGCGGACAG GCTTACCGGGTCAGGGATATGATCGGTGATGCGATGTTGTTCGCCCGCCC GCCTGCTCCCCGACCTGAAACATTGTCGCTCTCACAAACCATTGATGACG TGCTCGTAAGCTTACAGGAAGAAATCAATCAAGGGAAAGTACAGCTAGAG GTCAACATTGCTGAGTCGCTGTCCCTGTACGCAGATGAAACACAGTGGAA AGTCGTGTTGAGTAATCTGCTGTTGAACAGTCTGCAGGCGATGGAAGCAG GTGGCCAGATTAAGATCAGCGCCTCCCCGCTTGAGACGGAGTCAGGGCCT TTCATTCACCTTAGGGTCATTGATGAGGGGGTGGGTCTGACAGAGGAAGA GCGCATCCACCTGTTTGATCCGTTTTACTCGGCACGACAGGCGGGACGAG GGCTCGGATTTGGTTTGTCCAAGTGCTGGCGGATTGCCACGCAGCACGGT GCTACGATTGCTGCAGAAACTAACTCAGATCGCGGGGTCACCTTCCATCT TTACTGGCCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig102465:2..661+

>mRNA_M-pyrifera_M_contig102465.525.1 ID=mRNA_M-pyrifera_M_contig102465.525.1|Name=mRNA_M-pyrifera_M_contig102465.525.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1290bp|location=Sequence derived from alignment at M-pyrifera_M_contig102465:2..661+ (Macrocystis pyrifera P11B4 male)
ATGGCGGAATTTGCCGCCGGGGCCGGACATGAAATCAATAACCCCGTAGC
GACCATCGTCGGGCGGGTGCAGATGCTGCTCAAATCAGAGACTGACCCCG
AACGTCGGCAGGCCCTGTCGACAATTGGCGGACAGGCTTACCGGGTCAGG
GATATGATCGGTGATGCGATGTTGTTCGCCCGCCCGCCTGCTCCCCGACC
TGAAACATTGTCGCTCTCACAAACCATTGATGACGTGCTCGTAAGCTTAC
AGGAAGAAATCAATCAAGGGAAAGTACAGCTAGAGGTCAACATTGCTGAG
TCGCTGTCCCTGTACGCAGATGAAACACAGTGGAAAGTCGTGTTGAGTAA
TCTGCTGTTGAACAGTCTGCAGGCGATGGAAGCAGGTGGCCAGATTAAGA
TCAGCGCCTCCCCGCTTGAGACGGAGTCAGGGCCTTTCATTCACCTTAGG
GTCATTGATGAGGGGGTGGGTCTGACAGAGGAAGAGCGCATCCACCTGTT
TGATCCGTTTTACTCGGCACGACAGGCGGGACGAGGGCTCGGATTTGGTT
TGTCCAAGTGCTGGCGGATTGCCACGCAGCACGGTGCTACGATTGCTGCA
GAAACTAACTCAGATCGCGGGGTCACCTTCCATCTTTACTGGCCCATGGC
GGAATTTGCCGCCGGGGCCGGACATGAAATCAATAACCCCGTAGCGACCA
TCGTCGGGCGGGTGCAGATGCTGCTCAAATCAGAGACTGACCCCGAACGT
CGGCAGGCCCTGTCGACAATTGGCGGACAGGCTTACCGGGTCAGGGATAT
GATCGGTGATGCGATGTTGTTCGCCCGCCCGCCTGCTCCCCGACCTGAAA
CATTGTCGCTCTCACAAACCATTGATGACGTGCTCGTAAGCTTACAGGAA
GAAATCAATCAAGGGAAAGTACAGCTAGAGGTCAACATTGCTGAGTCGCT
GTCCCTGTACGCAGATGAAACACAGTGGAAAGTCGTGTTGAGTAATCTGC
TGTTGAACAGTCTGCAGGCGATGGAAGCAGGTGGCCAGATTAAGATCAGC
GCCTCCCCGCTTGAGACGGAGTCAGGGCCTTTCATTCACCTTAGGGTCAT
TGATGAGGGGGTGGGTCTGACAGAGGAAGAGCGCATCCACCTGTTTGATC
CGTTTTACTCGGCACGACAGGCGGGACGAGGGCTCGGATTTGGTTTGTCC
AAGTGCTGGCGGATTGCCACGCAGCACGGTGCTACGATTGCTGCAGAAAC
TAACTCAGATCGCGGGGTCACCTTCCATCTTTACTGGCCC
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