mRNA_M-pyrifera_M_contig102463.524.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102463.524.1 vs. uniprot
Match: A0A2B4S9N2_STYPI (Crt-like 1 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S9N2_STYPI) HSP 1 Score: 107 bits (268), Expect = 8.120e-25 Identity = 60/141 (42.55%), Postives = 90/141 (63.83%), Query Frame = 1 Query: 1 FASDPTRTPPFLQSVLQCFIVPMTIVSRILYTHFVDSRTQLLCAAAVVVGLFISLIPTIFDLGEASPAAVPLAKGAGRVLWPLCFLLGMVPAAMMGVLEEVILKTGKATEVEEVVDQVYFLTYSMWGQIATIALFFWVDII 423 FAS +RTPP+LQ++L F++P+TI+ RI+ H SR +LLC +++GLFISLIPTIF +A+ RV+WP+ F+LG +PAA+M VLEE L+ T E+ + +YFL +S Q+ I + W++I+ Sbjct: 148 FASKGSRTPPYLQNILGSFMIPLTILFRIVIVHKKPSRQKLLCGLVIMIGLFISLIPTIFS--DANSKDQDEVDDISRVMWPIMFMLGFIPAALMVVLEEKGLQMESETS-EDRIGVIYFLFWSTTYQVICIFVLLWLNIL 285
BLAST of mRNA_M-pyrifera_M_contig102463.524.1 vs. uniprot
Match: A0A3M6UFV9_POCDA (Uncharacterized protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UFV9_POCDA) HSP 1 Score: 104 bits (259), Expect = 5.860e-24 Identity = 61/144 (42.36%), Postives = 91/144 (63.19%), Query Frame = 1 Query: 1 FASDPTRTPPFLQSVLQCFIVPMTIVSRILYTHFVDSRTQLLCAAAVVVGLFISLIPTIFDLGEASPAAVPL---AKGAGRVLWPLCFLLGMVPAAMMGVLEEVILKTGKATEVEEVVDQVYFLTYSMWGQIATIALFFWVDII 423 FAS +RTPP+LQ++L F++P+TI+ R+L + +L C VVVGLFI LIPTIF E P A A+G RV+WP+ F+LG VPAA+M V+EE +K + ++ ++ +YFL ++ Q+ + L FW+DI+ Sbjct: 145 FASKGSRTPPYLQAILGNFLIPLTILFRLLIVRKKPTLLKLSCGVIVVVGLFICLIPTIFP--EVDPKAEKRKNDAQGVSRVMWPIIFMLGFVPAAVMNVIEEKGVKMESQSS-KKGINLLYFLFWTSSYQLLCVGLLFWLDIL 285
BLAST of mRNA_M-pyrifera_M_contig102463.524.1 vs. uniprot
Match: UPI0009E532D9 (crt homolog 2-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E532D9) HSP 1 Score: 103 bits (258), Expect = 1.970e-23 Identity = 62/148 (41.89%), Postives = 91/148 (61.49%), Query Frame = 1 Query: 1 FASDPTRTPPFLQSVLQCFIVPMTIVSRILYTHFVDSRTQLLCAAAVVVGLFISLIPTIFDLGEASPAAVPLAK-------GAGRVLWPLCFLLGMVPAAMMGVLEEVILKTGKATEVEEVVDQVYFLTYSMWGQIATIALFFWVDII 423 FAS +RTPP+LQ++L F++P+TI+ R+L + +LLC AVVVGLF+ LIPTIF P+ P A+ G RV+WPL F+LG +PAA+M VLEE +K T + ++ VY+L ++ Q+ + FW+DI+ Sbjct: 143 FASKGSRTPPYLQAILGNFMIPLTILFRVLIVRKRPTLLKLLCGLAVVVGLFVCLIPTIF------PSVDPKAEKTKNETHGVSRVMWPLIFMLGFIPAAIMNVLEEHGVKMENQTS-RKGINLVYYLFWTSLYQLICVGSLFWLDIL 283
BLAST of mRNA_M-pyrifera_M_contig102463.524.1 vs. uniprot
Match: B3S0V9_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3S0V9_TRIAD) HSP 1 Score: 103 bits (257), Expect = 2.150e-23 Identity = 56/141 (39.72%), Postives = 85/141 (60.28%), Query Frame = 1 Query: 1 FASDPTRTPPFLQSVLQCFIVPMTIVSRILYTHFVDSRTQLLCAAAVVVGLFISLIPTIFDL--GEASPAAVPLAKGAGRVLWPLCFLLGMVPAAMMGVLEEVILKTGKATEVEEVVDQVYFLTYSMWGQIATIALFFWVD 417 FAS TRTPP+LQ++LQ +P+ ++ R L H + +L+C V++ LFI LIP IF G+A A GA ++WP+ F++G +PAA M EE LK E V+ +++LT++ + Q+ T+ALFFW+D Sbjct: 135 FASSGTRTPPYLQAILQNVSIPLIVIVRYLLLHKKPTLKKLICTVVVMLCLFICLIPKIFPSINGKAQHHLPHAATGAAAIIWPIIFMIGFIPAAFMNAYEEAGLKMKSPNEKR--VNAIWYLTWTSFYQLVTVALFFWLD 273
BLAST of mRNA_M-pyrifera_M_contig102463.524.1 vs. uniprot
Match: A0A2B4S887_STYPI (Crt-like 1 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S887_STYPI) HSP 1 Score: 103 bits (256), Expect = 3.960e-23 Identity = 61/144 (42.36%), Postives = 91/144 (63.19%), Query Frame = 1 Query: 1 FASDPTRTPPFLQSVLQCFIVPMTIVSRILYTHFVDSRTQLLCAAAVVVGLFISLIPTIFDLGEASPAAVPL---AKGAGRVLWPLCFLLGMVPAAMMGVLEEVILKTGKATEVEEVVDQVYFLTYSMWGQIATIALFFWVDII 423 FAS +RTPP+LQ++L F++P+TI+ R+L + +L C VVVGLFI LIPTIF E P A A+G RV+WP+ F+LG VPAA+M VLEE +K + ++ ++ +YFL ++ Q+ + + FW+DI+ Sbjct: 146 FASKGSRTPPYLQAILGNFMIPLTILFRVLIVRKKPTLLKLSCGIIVVVGLFICLIPTIFP--EVDPKAEKKKNEAEGVSRVMWPIIFMLGFVPAAIMNVLEERGVKMENRSS-KKGINLLYFLFWTSSYQLLCVGVLFWLDIL 286
BLAST of mRNA_M-pyrifera_M_contig102463.524.1 vs. uniprot
Match: UPI000F557114 (uncharacterized protein LOC113664762 n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F557114) HSP 1 Score: 100 bits (249), Expect = 2.790e-22 Identity = 57/142 (40.14%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 1 FASDPTRTPPFLQSVLQCFIVPMTIVSRILYTHFVDSRTQLLCAAAVVVGLFISLIPTIF-DLGEASPAAVPLAKGAGRVLWPLCFLLGMVPAAMMGVLEEVILKTGKATEVEEVVDQVYFLTYSMWGQIATIALFFWVDII 423 FAS +RTPP+LQ++L F++P+TI+ R+L + +L C VVVGLFI LIPTIF D+ + A+G RV+WP+ F+LG P A+M V+EE +K + ++ ++ +YFL ++ Q+ + L FW+DI+ Sbjct: 146 FASKGSRTPPYLQAILGNFMIPLTILIRMLILRKKPTLLKLSCGVIVVVGLFICLIPTIFPDVDPKAEKRKNDAQGVSRVMWPMIFMLGFAPLAVMNVIEEKGVKMESKSS-KKCINLMYFLFWTSSYQLLCVGLLFWLDIL 286
BLAST of mRNA_M-pyrifera_M_contig102463.524.1 vs. uniprot
Match: UPI0009E560D5 (crt homolog 3-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E560D5) HSP 1 Score: 100 bits (250), Expect = 2.940e-22 Identity = 56/143 (39.16%), Postives = 90/143 (62.94%), Query Frame = 1 Query: 1 FASDPTRTPPFLQSVLQCFIVPMTIVSRILYTHFVDSRTQLLCAAAVVVGLFISLIPTIFDL--GEASPAAVPLAKGAGRVLWPLCFLLGMVPAAMMGVLEEVILKTGKATEVEEVVDQVYFLTYSMWGQIATIALFFWVDII 423 FA+ TRTPP+LQ++L F++P+T++ R++ + +LLC+ AV++GLFI +IPT+F + S RV+WP+ F+LG VP A M V EE +K T E++ + VYFL ++ ++ ++ALFFWVD++ Sbjct: 146 FAAKGTRTPPYLQAILGNFLIPLTVLFRLIILRRKPTLLKLLCSFAVIIGLFICIIPTVFPEIDSKISDETTIEIDSFSRVMWPIIFMLGSVPEATMRVYEERGVKIEDDTSNEQI-NLVYFLFWTSTYELLSVALFFWVDLL 287
BLAST of mRNA_M-pyrifera_M_contig102463.524.1 vs. uniprot
Match: A0A3M6UFT3_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UFT3_POCDA) HSP 1 Score: 100 bits (249), Expect = 6.850e-22 Identity = 57/142 (40.14%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 1 FASDPTRTPPFLQSVLQCFIVPMTIVSRILYTHFVDSRTQLLCAAAVVVGLFISLIPTIF-DLGEASPAAVPLAKGAGRVLWPLCFLLGMVPAAMMGVLEEVILKTGKATEVEEVVDQVYFLTYSMWGQIATIALFFWVDII 423 FAS +RTPP+LQ++L F++P+TI+ R+L + +L C VVVGLFI LIPTIF D+ + A+G RV+WP+ F+LG P A+M V+EE +K + ++ ++ +YFL ++ Q+ + L FW+DI+ Sbjct: 510 FASKGSRTPPYLQAILGNFMIPLTILIRMLILRKKPTLLKLSCGVIVVVGLFICLIPTIFPDVDPKAEKRKNDAQGVSRVMWPMIFMLGFAPLAVMNVIEEKGVKMESKSS-KKCINLMYFLFWTSSYQLLCVGLLFWLDIL 650
BLAST of mRNA_M-pyrifera_M_contig102463.524.1 vs. uniprot
Match: UPI0009E24562 (crt homolog 2-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E24562) HSP 1 Score: 99.8 bits (247), Expect = 7.150e-22 Identity = 59/142 (41.55%), Postives = 84/142 (59.15%), Query Frame = 1 Query: 1 FASDPTRTPPFLQSVLQCFIVPMTIVSRILYTHFVDSRTQLLCAAAVVVGLFISLIPTIFDLGEASPAAVPL-AKGAGRVLWPLCFLLGMVPAAMMGVLEEVILKTGKATEVEEVVDQVYFLTYSMWGQIATIALFFWVDII 423 FAS +RTPP+LQ++L F +P+TI+ R+L + +LLC AVVVGLF+ LIPTIF + A G RV+WPL F+LG VPA +M V+ E +K + + VYFL ++ Q+ + L FW+DI+ Sbjct: 146 FASKGSRTPPYLQAILGNFGIPLTILFRVLIVRKRPTLLKLLCGLAVVVGLFVCLIPTIFPAVDPKAGKTKTEAHGVSRVMWPLIFMLGFVPATVMNVIIERGVKMENQISRRRI-NLVYFLFWTSLYQLLCVGLLFWLDIL 286
BLAST of mRNA_M-pyrifera_M_contig102463.524.1 vs. uniprot
Match: A0A8J9ZHY9_BRALA (Hypp1431 protein n=2 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZHY9_BRALA) HSP 1 Score: 99.0 bits (245), Expect = 1.630e-21 Identity = 59/140 (42.14%), Postives = 81/140 (57.86%), Query Frame = 1 Query: 4 ASDPTRTPPFLQSVLQCFIVPMTIVSRILYTHFVDSRTQLLCAAAVVVGLFISLIPTIFDLGEASPAAVPLAKGAGRVLWPLCFLLGMVPAAMMGVLEEVILKTGKATEVEEVVDQVYFLTYSMWGQIATIALFFWVDII 423 AS TRT P+LQ++L F +P+TI+ R L +R + C+ V+V LFI L+P + A A P AKGA VLWPLCF++G VPAA M V+EE ++K K E++ ++FL + Q A FW DII Sbjct: 203 ASSGTRTAPYLQAILGNFTIPITILLRFLVLRKKPTRRKFSCSMLVLVSLFICLLPKMIPALGADKA--PGAKGAAGVLWPLCFMIGFVPAAAMNVIEEKVMKMTKGARREQI-SLIWFLFWESVYQFLCAAALFWTDII 339 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102463.524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102463.524.1 >prot_M-pyrifera_M_contig102463.524.1 ID=prot_M-pyrifera_M_contig102463.524.1|Name=mRNA_M-pyrifera_M_contig102463.524.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp FASDPTRTPPFLQSVLQCFIVPMTIVSRILYTHFVDSRTQLLCAAAVVVGback to top mRNA from alignment at M-pyrifera_M_contig102463:1..660+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102463.524.1 ID=mRNA_M-pyrifera_M_contig102463.524.1|Name=mRNA_M-pyrifera_M_contig102463.524.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig102463:1..660+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102463:1..660+ >mRNA_M-pyrifera_M_contig102463.524.1 ID=mRNA_M-pyrifera_M_contig102463.524.1|Name=mRNA_M-pyrifera_M_contig102463.524.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig102463:1..660+ (Macrocystis pyrifera P11B4 male)back to top |