mRNA_M-pyrifera_M_contig102453.522.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig102453.522.1
Unique NamemRNA_M-pyrifera_M_contig102453.522.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig102453.522.1 vs. uniprot
Match: A0A2G8JF51_STIJA (Putative acyloxyacyl hydrolase isoform X2 (Fragment) n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JF51_STIJA)

HSP 1 Score: 103 bits (256), Expect = 1.580e-25
Identity = 45/82 (54.88%), Postives = 62/82 (75.61%), Query Frame = 1
Query:    4 AHFDMFKMDFDIQALSKQWIQKGGEARDLIEPSDGFHPSQVGNQLIAEEFWKQLQQNKPNWLPKKNPHNKDIEKLFGDQGGY 249
             +FD+  MD++IQ L + W   GG+A D+IEP DGFHPSQV N L+AE +W+++ +  P+ L +KNPHN +I+KLFGDQGGY
Sbjct:  141 TNFDVHYMDYNIQRLIQMWTSTGGKAADIIEPVDGFHPSQVANFLLAEYYWEEMNKLVPS-LFRKNPHNAEIKKLFGDQGGY 221          
BLAST of mRNA_M-pyrifera_M_contig102453.522.1 vs. uniprot
Match: L8H4D7_ACACA (Acyloxyacyl hydrolase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H4D7_ACACA)

HSP 1 Score: 105 bits (261), Expect = 1.400e-24
Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 1
Query:    1 FAHFDMFKMDFDIQALSKQWIQKGGEARDLIEPSDGFHPSQVGNQLIAEEFWKQLQQNKPNWLPKKNPHNKDIEKLFGDQGGY 249
            F HFD     F +  +++QW Q+GG+A DLIEP DGFHPSQ+G+ LIA + W  L Q++P+W+P  NP+N  I +LFG QGGY
Sbjct:  448 FKHFDTAYTPFPLAQIAQQWEQRGGQAADLIEPIDGFHPSQIGHYLIAGDVWNGLLQSRPDWIPAPNPNNARIAQLFGAQGGY 530          
BLAST of mRNA_M-pyrifera_M_contig102453.522.1 vs. uniprot
Match: A0A2Y9T8C6_PHYMC (acyloxyacyl hydrolase n=29 Tax=Cetacea TaxID=9721 RepID=A0A2Y9T8C6_PHYMC)

HSP 1 Score: 102 bits (255), Expect = 1.050e-23
Identity = 43/83 (51.81%), Postives = 61/83 (73.49%), Query Frame = 1
Query:    1 FAHFDMFKMDFDIQALSKQWIQKGGEARDLIEPSDGFHPSQVGNQLIAEEFWKQLQQNKPNWLPKKNPHNKDIEKLFGDQGGY 249
            F +F++F MDFD Q ++++W + GG+   LIEP DGFHPS+V  QL+A+ FWK++Q   P  L K+NP N  IE++FGDQGG+
Sbjct:  493 FTNFNLFYMDFDFQEITEKWQKSGGQPWQLIEPMDGFHPSEVALQLLADRFWKKVQLQWPQVLGKENPFNPQIEQVFGDQGGH 575          
BLAST of mRNA_M-pyrifera_M_contig102453.522.1 vs. uniprot
Match: A0A2G8JR85_STIJA (Putative acyloxyacyl hydrolase-like n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JR85_STIJA)

HSP 1 Score: 102 bits (255), Expect = 1.060e-23
Identity = 45/82 (54.88%), Postives = 61/82 (74.39%), Query Frame = 1
Query:    4 AHFDMFKMDFDIQALSKQWIQKGGEARDLIEPSDGFHPSQVGNQLIAEEFWKQLQQNKPNWLPKKNPHNKDIEKLFGDQGGY 249
             +FD+  MD++IQ L + W   GG+A D+IEP DGFHPSQV N L+AE +W+++ +  P  L +KNPHN +I+KLFGDQGGY
Sbjct:  497 TNFDVHYMDYNIQRLIQMWTSTGGKAADIIEPVDGFHPSQVANFLLAEYYWEEMNKLVPG-LFRKNPHNAEIKKLFGDQGGY 577          
BLAST of mRNA_M-pyrifera_M_contig102453.522.1 vs. uniprot
Match: A0A8D0GPS7_SPHPU (Acyloxyacyl hydrolase n=1 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0GPS7_SPHPU)

HSP 1 Score: 100 bits (249), Expect = 6.170e-23
Identity = 43/83 (51.81%), Postives = 61/83 (73.49%), Query Frame = 1
Query:    1 FAHFDMFKMDFDIQALSKQWIQKGGEARDLIEPSDGFHPSQVGNQLIAEEFWKQLQQNKPNWLPKKNPHNKDIEKLFGDQGGY 249
            +A+FD+F MDF +  ++++W  +GGEA  LIEP+DGFHPSQ+ + L A  FW++  +  P+ L K+NP NK IE +FGDQGGY
Sbjct:  439 YANFDIFYMDFPLVEIAEEWHSRGGEAWQLIEPTDGFHPSQIASALGARIFWQKALREWPHILGKENPFNKQIEDVFGDQGGY 521          
BLAST of mRNA_M-pyrifera_M_contig102453.522.1 vs. uniprot
Match: A0A8D0GY39_SPHPU (Acyloxyacyl hydrolase n=3 Tax=Sphenodon punctatus TaxID=8508 RepID=A0A8D0GY39_SPHPU)

HSP 1 Score: 100 bits (249), Expect = 6.230e-23
Identity = 43/83 (51.81%), Postives = 61/83 (73.49%), Query Frame = 1
Query:    1 FAHFDMFKMDFDIQALSKQWIQKGGEARDLIEPSDGFHPSQVGNQLIAEEFWKQLQQNKPNWLPKKNPHNKDIEKLFGDQGGY 249
            +A+FD+F MDF +  ++++W  +GGEA  LIEP+DGFHPSQ+ + L A  FW++  +  P+ L K+NP NK IE +FGDQGGY
Sbjct:  442 YANFDIFYMDFPLVEIAEEWHSRGGEAWQLIEPTDGFHPSQIASALGARIFWQKALREWPHILGKENPFNKQIEDVFGDQGGY 524          
BLAST of mRNA_M-pyrifera_M_contig102453.522.1 vs. uniprot
Match: UPI000C8110E0 (acyloxyacyl hydrolase isoform X2 n=1 Tax=Loxodonta africana TaxID=9785 RepID=UPI000C8110E0)

HSP 1 Score: 100 bits (249), Expect = 6.620e-23
Identity = 42/83 (50.60%), Postives = 61/83 (73.49%), Query Frame = 1
Query:    1 FAHFDMFKMDFDIQALSKQWIQKGGEARDLIEPSDGFHPSQVGNQLIAEEFWKQLQQNKPNWLPKKNPHNKDIEKLFGDQGGY 249
            F +F++F MDF  Q ++++W ++GG+   LIEP DGFHPS+V + L+A+ FWK++Q   P  L K+NP N  IEK+FGDQGG+
Sbjct:  466 FTNFNLFYMDFAFQEITEEWQRRGGQPWQLIEPVDGFHPSEVASLLLADNFWKKVQLQWPEVLGKENPFNLQIEKVFGDQGGH 548          
BLAST of mRNA_M-pyrifera_M_contig102453.522.1 vs. uniprot
Match: A0A8C8Z9U8_PROSS (Acyloxyacyl hydrolase n=3 Tax=Lemuriformes TaxID=376915 RepID=A0A8C8Z9U8_PROSS)

HSP 1 Score: 100 bits (249), Expect = 6.950e-23
Identity = 40/83 (48.19%), Postives = 63/83 (75.90%), Query Frame = 1
Query:    1 FAHFDMFKMDFDIQALSKQWIQKGGEARDLIEPSDGFHPSQVGNQLIAEEFWKQLQQNKPNWLPKKNPHNKDIEKLFGDQGGY 249
            F++FD+F MDF  Q + ++W+++GG+  +LIEP DGFHP++  ++L+A+ FWK++Q   P  L K+NP N  IE++FGDQGG+
Sbjct:  493 FSNFDLFYMDFAFQEIVQEWLKRGGQPWELIEPVDGFHPNEAASRLLADLFWKRVQLQWPQVLGKENPFNPQIEQVFGDQGGH 575          
BLAST of mRNA_M-pyrifera_M_contig102453.522.1 vs. uniprot
Match: F2TZY4_SALR5 (Acyloxyacyl hydrolase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZY4_SALR5)

HSP 1 Score: 100 bits (249), Expect = 7.020e-23
Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = 1
Query:    1 FAHFDMFKMDFDIQALSKQWIQKGGEARDLIEPSDGFHPSQVGNQLIAEEFWKQLQQNKPNWLPKKNPHNKDIEKLFGDQGGY 249
            F +FD+      I A  K+W  +GG+A  LIEP DGFHPSQ    LI E+FWK L Q  P+ +PK NPHN DI ++FGDQGGY
Sbjct:  501 FNNFDVHYFPNPIMAALKEWEARGGKAWQLIEPVDGFHPSQNAQPLITEQFWKYLMQEHPHVVPKVNPHNADIARIFGDQGGY 583          
BLAST of mRNA_M-pyrifera_M_contig102453.522.1 vs. uniprot
Match: A0A5A8DE27_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DE27_CAFRO)

HSP 1 Score: 100 bits (248), Expect = 9.790e-23
Identity = 41/80 (51.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query:   10 FDMFKMDFDIQALSKQWIQKGGEARDLIEPSDGFHPSQVGNQLIAEEFWKQLQQNKPNWLPKKNPHNKDIEKLFGDQGGY 249
            F+++++D + +AL  Q++QK G  R  IEP DGFHPSQ  +QL+A+  WK L+ N+P+W+P  NP+N  I  LFGDQGGY
Sbjct:  521 FEVYRLDINWKALFAQYVQKYGNPRGAIEPVDGFHPSQATHQLLADVIWKDLEANRPHWIPPVNPNNAKIAALFGDQGGY 600          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102453.522.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2G8JF51_STIJA1.580e-2554.88Putative acyloxyacyl hydrolase isoform X2 (Fragmen... [more]
L8H4D7_ACACA1.400e-2453.01Acyloxyacyl hydrolase n=1 Tax=Acanthamoeba castell... [more]
A0A2Y9T8C6_PHYMC1.050e-2351.81acyloxyacyl hydrolase n=29 Tax=Cetacea TaxID=9721 ... [more]
A0A2G8JR85_STIJA1.060e-2354.88Putative acyloxyacyl hydrolase-like n=1 Tax=Sticho... [more]
A0A8D0GPS7_SPHPU6.170e-2351.81Acyloxyacyl hydrolase n=1 Tax=Sphenodon punctatus ... [more]
A0A8D0GY39_SPHPU6.230e-2351.81Acyloxyacyl hydrolase n=3 Tax=Sphenodon punctatus ... [more]
UPI000C8110E06.620e-2350.60acyloxyacyl hydrolase isoform X2 n=1 Tax=Loxodonta... [more]
A0A8C8Z9U8_PROSS6.950e-2348.19Acyloxyacyl hydrolase n=3 Tax=Lemuriformes TaxID=3... [more]
F2TZY4_SALR57.020e-2354.22Acyloxyacyl hydrolase n=1 Tax=Salpingoeca rosetta ... [more]
A0A5A8DE27_CAFRO9.790e-2351.25Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102453contigM-pyrifera_M_contig102453:4..255 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score99.8
Seed ortholog evalue6.2e-19
Seed eggNOG ortholog59538.XP_005960422.1
Preferred nameAOAH
KEGG koko:K01065
Hectar predicted targeting categoryother localisation
GOsGO:0000272,GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005975,GO:0005976,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008653,GO:0009056,GO:0009057,GO:0009104,GO:0009987,GO:0016042,GO:0016052,GO:0016787,GO:0016788,GO:0019752,GO:0031347,GO:0031348,GO:0032101,GO:0032102,GO:0032787,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044247,GO:0044248,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044281,GO:0046872,GO:0048519,GO:0048583,GO:0048585,GO:0050528,GO:0050727,GO:0050728,GO:0050789,GO:0052689,GO:0065007,GO:0071704,GO:0080134,GO:1901135,GO:1901136,GO:1901575,GO:1903509
EggNOG free text desc.Acyloxyacyl hydrolase
EggNOG OGs28P48@1,2QVQW@2759,39S84@33154,3BFW3@33208,3CTEX@33213,3JF6X@40674,488SG@7711,4982D@7742,4J1W5@91561
EC3.1.1.77
COG Functional cat.S
Best tax levelCetartiodactyla
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size252
Cds size237
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815527.0750709-UTR-M-pyrifera_M_contig102453:3..181622815527.0750709-UTR-M-pyrifera_M_contig102453:3..18Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig102453 4..18 +
1692277449.7978754-UTR-M-pyrifera_M_contig102453:3..181692277449.7978754-UTR-M-pyrifera_M_contig102453:3..18Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig102453 4..18 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815527.0886073-CDS-M-pyrifera_M_contig102453:18..2551622815527.0886073-CDS-M-pyrifera_M_contig102453:18..255Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102453 19..255 +
1692277449.813953-CDS-M-pyrifera_M_contig102453:18..2551692277449.813953-CDS-M-pyrifera_M_contig102453:18..255Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102453 19..255 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102453.522.1prot_M-pyrifera_M_contig102453.522.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig102453 19..255 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig102453.522.1

>prot_M-pyrifera_M_contig102453.522.1 ID=prot_M-pyrifera_M_contig102453.522.1|Name=mRNA_M-pyrifera_M_contig102453.522.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=79bp
MFKMDFDIQALSKQWIQKGGEARDLIEPSDGFHPSQVGNQLIAEEFWKQL
QQNKPNWLPKKNPHNKDIEKLFGDQGGY*
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mRNA from alignment at M-pyrifera_M_contig102453:4..255+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig102453.522.1 ID=mRNA_M-pyrifera_M_contig102453.522.1|Name=mRNA_M-pyrifera_M_contig102453.522.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig102453:4..255+ (Macrocystis pyrifera P11B4 male)
TTTGCGCACTTTGACATGTTCAAGATGGACTTTGACATCCAAGCACTCTC CAAGCAGTGGATCCAAAAGGGAGGGGAGGCCAGGGACCTCATTGAGCCCT CGGATGGCTTCCACCCATCCCAGGTCGGAAACCAGCTCATCGCAGAAGAG TTCTGGAAGCAGCTGCAGCAGAACAAGCCAAACTGGCTCCCAAAGAAAAA CCCGCACAACAAGGACATTGAGAAGCTCTTCGGAGACCAGGGAGGGTACT AG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig102453:4..255+

>mRNA_M-pyrifera_M_contig102453.522.1 ID=mRNA_M-pyrifera_M_contig102453.522.1|Name=mRNA_M-pyrifera_M_contig102453.522.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig102453:4..255+ (Macrocystis pyrifera P11B4 male)
ATGTTCAAGATGGACTTTGACATCCAAGCACTCTCCAAGCAGTGGATCCA
AAAGGGAGGGGAGGCCAGGGACCTCATTGAGCCCTCGGATGGCTTCCACC
CATCCCAGGTCGGAAACCAGCTCATCGCAGAAGAGTTCTGGAAGCAGCTG
CAGCAGAACAAGCCAAACTGGCTCCCAAAGAAAAACCCGCACAACAAGGA
CATTGAGAAGCTCTTCGGAGACCAGGGAGGGTACTAGATGTTCAAGATGG
ACTTTGACATCCAAGCACTCTCCAAGCAGTGGATCCAAAAGGGAGGGGAG
GCCAGGGACCTCATTGAGCCCTCGGATGGCTTCCACCCATCCCAGGTCGG
AAACCAGCTCATCGCAGAAGAGTTCTGGAAGCAGCTGCAGCAGAACAAGC
CAAACTGGCTCCCAAAGAAAAACCCGCACAACAAGGACATTGAGAAGCTC
TTCGGAGACCAGGGAGGGTACTAG
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