mRNA_M-pyrifera_M_contig102425.515.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig102425.515.1
Unique NamemRNA_M-pyrifera_M_contig102425.515.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A7D7VG20_9RHOB (FO synthase n=1 Tax=Boseongicola sp. TaxID=1886600 RepID=A0A7D7VG20_9RHOB)

HSP 1 Score: 338 bits (868), Expect = 8.010e-109
Identity = 168/220 (76.36%), Postives = 189/220 (85.91%), Query Frame = 1
Query:    1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660
            LRAMA LV +ETGLLPHLNPGIMT EE+ASLREVSVSMGIM ESTSP L++ G CH GSPDK+P VRL  I   G  ++PFTSGILIGIGE+R++RI+SL++LR+LH   GH+QEIIIQNFRAKPGT+MA+APEPD+A LQWTIA ARLIFGP MSIQAPPNLS GG   LI AGINDWGGVSPVTPDHVNPEAPWPHL+ LA +TA+ GKILVERL VY
Sbjct:  132 LRAMAELVLKETGLLPHLNPGIMTTEEMASLREVSVSMGIMFESTSPLLLQKGGCHFGSPDKDPNVRLATIRAAGELKIPFTSGILIGIGETRADRIDSLIKLRQLHLDFGHIQEIIIQNFRAKPGTKMANAPEPDLADLQWTIAAARLIFGPGMSIQAPPNLSNGGAG-LIAAGINDWGGVSPVTPDHVNPEAPWPHLDQLATDTAESGKILVERLGVY 350          
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: UPI00195506CE (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH n=1 Tax=Roseovarius amoyensis TaxID=2211448 RepID=UPI00195506CE)

HSP 1 Score: 337 bits (864), Expect = 9.870e-109
Identity = 169/220 (76.82%), Postives = 186/220 (84.55%), Query Frame = 1
Query:    1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660
            LRAMA LVFRETGL PHLNPG+M A EIA+LR VSVSMGIMLE+ S RL E G CH GSPDK+P VRLE I E GRQ+VPFTSGILIGIGE+R+ERIESLL LR LH+R GH+QEIIIQNFRAKPGTRMA+APEPD+A LQWTIA ARLIFGP M +QAPPNLS      L++AGI+DWGGVSPVTPDHVNPEAPWPHL +LA  TA  GK+LVERL VY
Sbjct:   77 LRAMAELVFRETGLFPHLNPGVMNAAEIAALRRVSVSMGIMLETVSVRLSERGGCHFGSPDKDPAVRLETIAEAGRQKVPFTSGILIGIGETRAERIESLLALRNLHDRFGHIQEIIIQNFRAKPGTRMANAPEPDLADLQWTIAAARLIFGPEMPVQAPPNLSERAAG-LVEAGISDWGGVSPVTPDHVNPEAPWPHLNELARATASCGKLLVERLGVY 295          
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A1E4ZWW5_9GAMM (FO synthase n=1 Tax=Chromatiales bacterium (ex Bugula neritina AB1) TaxID=1868282 RepID=A0A1E4ZWW5_9GAMM)

HSP 1 Score: 334 bits (856), Expect = 7.020e-107
Identity = 164/220 (74.55%), Postives = 189/220 (85.91%), Query Frame = 1
Query:    1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660
            L A+A LV+RETGLLPHLNPG+MT  EIASLREVSVSMGIMLESTS +L++ G CH GSPDK P+VRL  I   G   VPFTSGILIGIGE+R++RIESLL LR+LHE+HGHLQEII+QNF+AKPGT MA+A EPD+A LQW+IAVARLIFG  MSIQAPPNLS G    L++AGINDWGGVSP+TPDHVNPEAPWPHL+DL+A+TA  GK+LVERL +Y
Sbjct:  129 LCAVAGLVYRETGLLPHLNPGVMTEAEIASLREVSVSMGIMLESTSGKLLKRGGCHFGSPDKNPQVRLATINSAGELGVPFTSGILIGIGETRADRIESLLALRKLHEQHGHLQEIIVQNFKAKPGTLMANATEPDLAELQWSIAVARLIFGAQMSIQAPPNLSAGHTVALVEAGINDWGGVSPLTPDHVNPEAPWPHLDDLSADTAKAGKVLVERLGIY 348          
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A2E2YDE8_9PROT (FO synthase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E2YDE8_9PROT)

HSP 1 Score: 332 bits (850), Expect = 6.670e-106
Identity = 162/220 (73.64%), Postives = 188/220 (85.45%), Query Frame = 1
Query:    1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660
            LRAMA +VF ET LLPHLNPGIM A +I++LREVSVSMGIMLES+S RLM  G CHHGSPDK P+VR+  I+E GRQ+VPFTSGILIGIGE+++ERIE+LL LR  HER+GH+QEII+QNFRAK GT MA++ EPD+A LQWTIA+ARL+FGP MSIQAPPNLS     +LI AGINDWGGVSPVTPDHVNPEAPWPHL+ LA +TA   KILVERL++Y
Sbjct:  117 LRAMALMVFEETALLPHLNPGIMEASDISALREVSVSMGIMLESSSERLMAKGMCHHGSPDKAPKVRIATIDEAGRQKVPFTSGILIGIGETKAERIETLLALRDSHERYGHIQEIIVQNFRAKVGTLMANSDEPDLADLQWTIALARLVFGPDMSIQAPPNLSFNDASKLIMAGINDWGGVSPVTPDHVNPEAPWPHLDSLALQTAQQDKILVERLSIY 336          
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A7V9F967_9CHLR (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9F967_9CHLR)

HSP 1 Score: 320 bits (820), Expect = 9.040e-106
Identity = 160/217 (73.73%), Postives = 180/217 (82.95%), Query Frame = 1
Query:   10 MAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660
            +A LV RETGLLPH+NPG+MTAEEIA+LR VSVS GIMLES S RL E G  H GSPDK+P VRLE +   G Q+VPFTSGILIGIGE+R ER+ESLL LR LH+R+GH+QE+IIQNFRAKPGTRMA+APEPD+  L WTIAVAR+IFG  M+IQAPPNLS      LI AG+NDWGGVSPVTPDHVNPEAPWPHLEDL   TA  GK+L+ERLAVY
Sbjct:  136 VADLVLRETGLLPHVNPGVMTAEEIAALRRVSVSQGIMLESISQRLTERGGPHFGSPDKDPSVRLETMRMAGEQQVPFTSGILIGIGETRLERVESLLALRDLHKRYGHIQEVIIQNFRAKPGTRMANAPEPDLDDLLWTIAVARIIFGTEMNIQAPPNLSPESYPRLIAAGLNDWGGVSPVTPDHVNPEAPWPHLEDLRQHTAAAGKLLIERLAVY 352          
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: D6U1E6_9CHLR (FO synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 TaxID=485913 RepID=D6U1E6_9CHLR)

HSP 1 Score: 331 bits (848), Expect = 1.870e-105
Identity = 165/220 (75.00%), Postives = 186/220 (84.55%), Query Frame = 1
Query:    1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660
            L  MA LVFRETGLLPH NPG+MTA+EIA LR VSVS GIMLES S RL E G  H+GSPDK+P+VRLE I   G  +VPFTSGILIGIGE+R ERIESLL LR LH+ +GH+QEIIIQNFRAKPGTRMA+APEPD+  L WT+A+ARLIFG TM+IQAPPNLS G  ++L+ AG+NDWGGVSPVTPDHVNPEA WPHLE+LAA TA+ GKILVERLAVY
Sbjct:  138 LAEMAELVFRETGLLPHANPGVMTADEIALLRRVSVSQGIMLESASERLGERGGAHYGSPDKQPQVRLETIRLAGELKVPFTSGILIGIGETRQERIESLLALRTLHQHYGHIQEIIIQNFRAKPGTRMANAPEPDLDDLLWTLAIARLIFGGTMNIQAPPNLSPGVYQQLVSAGLNDWGGVSPVTPDHVNPEARWPHLEELAARTAETGKILVERLAVY 357          
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A3D5PHQ2_9RHOB (FO synthase n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A3D5PHQ2_9RHOB)

HSP 1 Score: 325 bits (834), Expect = 9.050e-104
Identity = 164/220 (74.55%), Postives = 181/220 (82.27%), Query Frame = 1
Query:    1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660
            L AMA LV  ETGLLPH NPG+MT  E+A LREVSVSMGIMLESTS RLM+ G CH GSPDK+P VRLE I   G  ++PFTSGILIGIGE+R++RIESLL LR LHE  GH+QEIIIQNFRAKP T+MAD PEPD+A LQWTIA+AR+IFG  MSIQAPPNLS GG   LI AGINDWGGVSPVTPDHVNPEAPWP L+ LA +TA  GKILVERL +Y
Sbjct:  132 LHAMAELVINETGLLPHFNPGVMTRNELAKLREVSVSMGIMLESTSLRLMQQGGCHFGSPDKDPAVRLETIRHAGELKIPFTSGILIGIGETRADRIESLLALRDLHEEFGHIQEIIIQNFRAKPNTKMADVPEPDLADLQWTIAIARVIFGADMSIQAPPNLSDGGAG-LIAAGINDWGGVSPVTPDHVNPEAPWPLLDHLADDTAGCGKILVERLGIY 350          
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A3D3UEJ6_9PROT (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (Fragment) n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UEJ6_9PROT)

HSP 1 Score: 313 bits (802), Expect = 3.510e-103
Identity = 155/220 (70.45%), Postives = 179/220 (81.36%), Query Frame = 1
Query:    1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660
            L+AMA LV  ET LLPHLNPG+M+A ++ +LR V+ SMGIMLES +PRL + G  H+GSPDK P VRL  I   G   VPFTSGILIGIGE+R+ER+ SLL LR LH+ HGHLQE+IIQNFRAKPGT+MA APEPD+  L WTIAVAR++FG  M+IQAPPNLS G + ++IDAGINDWGGVSPVTPD VNPEAPWPHLEDLA ETA  GK+LVERL VY
Sbjct:  134 LQAMAKLVADETTLLPHLNPGLMSAADLVALRPVAASMGIMLESAAPRLCDKGMPHYGSPDKAPAVRLAAIARAGEAAVPFTSGILIGIGETRAERVASLLALRDLHDAHGHLQEVIIQNFRAKPGTKMAHAPEPDLEELLWTIAVARILFGAAMNIQAPPNLSPGVLPKIIDAGINDWGGVSPVTPDFVNPEAPWPHLEDLARETAAAGKLLVERLTVY 353          
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A2E5L2X1_9PROT (FO synthase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5L2X1_9PROT)

HSP 1 Score: 322 bits (825), Expect = 2.440e-102
Identity = 158/220 (71.82%), Postives = 183/220 (83.18%), Query Frame = 1
Query:    1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660
            LRAMA LVF ETGLLPHLNPG+M AEEI +LRE SVSMGIMLESTS RL+E G CH+GSPDK+P +RL+ I+E GRQ+VPFT+G+LIGIGE+R ERIE+LL LR  H    H+QEII+QNFRAK  T MA++ EP +  LQWTIAVARLIFG  MSIQAPPNLS    ++LI AGINDWGGVSP+TPDHVNPEAPWPHL+ LA ETA+ GK LVERL++Y
Sbjct:  102 LRAMALLVFEETGLLPHLNPGVMAAEEIVNLREASVSMGIMLESTSERLLEKGMCHYGSPDKDPNIRLKTIKEAGRQKVPFTTGLLIGIGENRRERIETLLVLREAHREFEHIQEIIVQNFRAKADTIMAESEEPSLEDLQWTIAVARLIFGSQMSIQAPPNLSYTEAKKLIGAGINDWGGVSPLTPDHVNPEAPWPHLDRLAEETAEEGKTLVERLSIY 321          
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A6P2BJJ5_9GAMM (FO synthase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6P2BJJ5_9GAMM)

HSP 1 Score: 323 bits (828), Expect = 3.000e-102
Identity = 156/220 (70.91%), Postives = 181/220 (82.27%), Query Frame = 1
Query:    1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660
            L A A  VF ETGLLPHLNPG ++ EE A LR+VS SMGIMLES + RL E G  HHGSPDK P VRLE +E+ GR RVPFT+GILIGIGE+R+ERIESLL +R  H+RHGH+QE+IIQNFRAKPGTRMA APEPD+  + WT+A+AR++FGP MS+QAPPNLS G +  L+DAGINDWGGVSPVTPD+VNPEAPWPHLE LA ETA  GK+L ERL +Y
Sbjct:  137 LEAAARAVFEETGLLPHLNPGNLSPEEFARLRKVSASMGIMLESAAERLTEKGMPHHGSPDKIPAVRLETLEQAGRARVPFTTGILIGIGETRAERIESLLAIRDSHDRHGHIQEVIIQNFRAKPGTRMASAPEPDLEEMLWTLAMARIVFGPDMSLQAPPNLSPGVLPRLVDAGINDWGGVSPVTPDYVNPEAPWPHLEQLARETAGAGKLLHERLTIY 356          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D7VG20_9RHOB8.010e-10976.36FO synthase n=1 Tax=Boseongicola sp. TaxID=1886600... [more]
UPI00195506CE9.870e-10976.825-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hyd... [more]
A0A1E4ZWW5_9GAMM7.020e-10774.55FO synthase n=1 Tax=Chromatiales bacterium (ex Bug... [more]
A0A2E2YDE8_9PROT6.670e-10673.64FO synthase n=1 Tax=Rhodospirillaceae bacterium Ta... [more]
A0A7V9F967_9CHLR9.040e-10673.737,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]
D6U1E6_9CHLR1.870e-10575.00FO synthase n=1 Tax=Ktedonobacter racemifer DSM 44... [more]
A0A3D5PHQ2_9RHOB9.050e-10474.55FO synthase n=1 Tax=Rhodobacteraceae bacterium Tax... [more]
A0A3D3UEJ6_9PROT3.510e-10370.457,8-didemethyl-8-hydroxy-5-deazariboflavin synthas... [more]
A0A2E5L2X1_9PROT2.440e-10271.82FO synthase n=1 Tax=Rhodospirillaceae bacterium Ta... [more]
A0A6P2BJJ5_9GAMM3.000e-10270.91FO synthase n=1 Tax=Gammaproteobacteria bacterium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102425contigM-pyrifera_M_contig102425:1..660 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score334.7
Seed ortholog evalue3.2e-89
Seed eggNOG ortholog485913.Krac_1419
Preferred namefbiC
KEGG rclassRC01381,RC03002,RC03007
KEGG koko:K11779
KEGG ReactionR09396
KEGG Pathwayko00680,ko01120,map00680,map01120
KEGG ModuleM00378
Hectar predicted targeting categoryother localisation
EggNOG free text desc.7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
EggNOG OGs2G7YI@200795,COG1060@1,COG1060@2
EC2.5.1.77
COG Functional cat.H
Best tax levelChloroflexi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size660
Cds size651
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815526.6991405-CDS-M-pyrifera_M_contig102425:0..6511622815526.6991405-CDS-M-pyrifera_M_contig102425:0..651Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102425 1..651 -
1692277449.6182413-CDS-M-pyrifera_M_contig102425:0..6511692277449.6182413-CDS-M-pyrifera_M_contig102425:0..651Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102425 1..651 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815526.7102313-UTR-M-pyrifera_M_contig102425:651..6601622815526.7102313-UTR-M-pyrifera_M_contig102425:651..660Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig102425 652..660 -
1692277449.6292226-UTR-M-pyrifera_M_contig102425:651..6601692277449.6292226-UTR-M-pyrifera_M_contig102425:651..660Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig102425 652..660 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102425.515.1prot_M-pyrifera_M_contig102425.515.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig102425 1..651 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig102425.515.1

>prot_M-pyrifera_M_contig102425.515.1 ID=prot_M-pyrifera_M_contig102425.515.1|Name=mRNA_M-pyrifera_M_contig102425.515.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp
MAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPG
QCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLEL
RRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGP
TMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLA
AETADHGKILVERLAVY
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mRNA from alignment at M-pyrifera_M_contig102425:1..660-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig102425.515.1 ID=mRNA_M-pyrifera_M_contig102425.515.1|Name=mRNA_M-pyrifera_M_contig102425.515.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig102425:1..660- (Macrocystis pyrifera P11B4 male)
CTGCGTGCCATGGCGCATCTGGTGTTTCGTGAAACCGGCCTGCTTCCGCA TCTCAATCCGGGGATTATGACCGCCGAGGAAATTGCGTCCCTGCGCGAAG TTTCTGTCTCCATGGGCATCATGCTGGAAAGCACATCGCCGCGCCTGATG GAGCCGGGGCAATGCCACCATGGTTCACCCGACAAGGAGCCCCGTGTCCG TCTCGAGATGATCGAAGAATGCGGCCGGCAAAGGGTGCCGTTTACCAGCG GTATTCTCATCGGGATCGGTGAATCACGATCGGAGCGCATAGAAAGTCTG CTGGAACTGCGTCGACTGCACGAGCGCCACGGTCACCTGCAGGAAATCAT CATTCAGAATTTTCGGGCCAAGCCCGGAACCCGGATGGCGGATGCGCCGG AGCCCGATATTGCCGCGTTGCAGTGGACGATCGCCGTTGCGCGGCTGATC TTCGGTCCAACGATGTCCATTCAGGCGCCGCCGAACCTGTCGACTGGCGG CGTGCGTGAACTGATCGATGCGGGGATCAACGATTGGGGCGGAGTTTCCC CGGTCACGCCGGATCACGTCAATCCCGAGGCGCCATGGCCGCATCTCGAA GACCTGGCCGCGGAAACGGCCGATCACGGCAAGATCCTGGTCGAACGTCT GGCCGTCTAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig102425:1..660-

>mRNA_M-pyrifera_M_contig102425.515.1 ID=mRNA_M-pyrifera_M_contig102425.515.1|Name=mRNA_M-pyrifera_M_contig102425.515.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig102425:1..660- (Macrocystis pyrifera P11B4 male)
ATGGCGCATCTGGTGTTTCGTGAAACCGGCCTGCTTCCGCATCTCAATCC
GGGGATTATGACCGCCGAGGAAATTGCGTCCCTGCGCGAAGTTTCTGTCT
CCATGGGCATCATGCTGGAAAGCACATCGCCGCGCCTGATGGAGCCGGGG
CAATGCCACCATGGTTCACCCGACAAGGAGCCCCGTGTCCGTCTCGAGAT
GATCGAAGAATGCGGCCGGCAAAGGGTGCCGTTTACCAGCGGTATTCTCA
TCGGGATCGGTGAATCACGATCGGAGCGCATAGAAAGTCTGCTGGAACTG
CGTCGACTGCACGAGCGCCACGGTCACCTGCAGGAAATCATCATTCAGAA
TTTTCGGGCCAAGCCCGGAACCCGGATGGCGGATGCGCCGGAGCCCGATA
TTGCCGCGTTGCAGTGGACGATCGCCGTTGCGCGGCTGATCTTCGGTCCA
ACGATGTCCATTCAGGCGCCGCCGAACCTGTCGACTGGCGGCGTGCGTGA
ACTGATCGATGCGGGGATCAACGATTGGGGCGGAGTTTCCCCGGTCACGC
CGGATCACGTCAATCCCGAGGCGCCATGGCCGCATCTCGAAGACCTGGCC
GCGGAAACGGCCGATCACGGCAAGATCCTGGTCGAACGTCTGGCCGTCTA
CATGGCGCATCTGGTGTTTCGTGAAACCGGCCTGCTTCCGCATCTCAATC
CGGGGATTATGACCGCCGAGGAAATTGCGTCCCTGCGCGAAGTTTCTGTC
TCCATGGGCATCATGCTGGAAAGCACATCGCCGCGCCTGATGGAGCCGGG
GCAATGCCACCATGGTTCACCCGACAAGGAGCCCCGTGTCCGTCTCGAGA
TGATCGAAGAATGCGGCCGGCAAAGGGTGCCGTTTACCAGCGGTATTCTC
ATCGGGATCGGTGAATCACGATCGGAGCGCATAGAAAGTCTGCTGGAACT
GCGTCGACTGCACGAGCGCCACGGTCACCTGCAGGAAATCATCATTCAGA
ATTTTCGGGCCAAGCCCGGAACCCGGATGGCGGATGCGCCGGAGCCCGAT
ATTGCCGCGTTGCAGTGGACGATCGCCGTTGCGCGGCTGATCTTCGGTCC
AACGATGTCCATTCAGGCGCCGCCGAACCTGTCGACTGGCGGCGTGCGTG
AACTGATCGATGCGGGGATCAACGATTGGGGCGGAGTTTCCCCGGTCACG
CCGGATCACGTCAATCCCGAGGCGCCATGGCCGCATCTCGAAGACCTGGC
CGCGGAAACGGCCGATCACGGCAAGATCCTGGTCGAACGTCTGGCCGTCT
AC
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