mRNA_M-pyrifera_M_contig102425.515.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A7D7VG20_9RHOB (FO synthase n=1 Tax=Boseongicola sp. TaxID=1886600 RepID=A0A7D7VG20_9RHOB) HSP 1 Score: 338 bits (868), Expect = 8.010e-109 Identity = 168/220 (76.36%), Postives = 189/220 (85.91%), Query Frame = 1 Query: 1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660 LRAMA LV +ETGLLPHLNPGIMT EE+ASLREVSVSMGIM ESTSP L++ G CH GSPDK+P VRL I G ++PFTSGILIGIGE+R++RI+SL++LR+LH GH+QEIIIQNFRAKPGT+MA+APEPD+A LQWTIA ARLIFGP MSIQAPPNLS GG LI AGINDWGGVSPVTPDHVNPEAPWPHL+ LA +TA+ GKILVERL VY Sbjct: 132 LRAMAELVLKETGLLPHLNPGIMTTEEMASLREVSVSMGIMFESTSPLLLQKGGCHFGSPDKDPNVRLATIRAAGELKIPFTSGILIGIGETRADRIDSLIKLRQLHLDFGHIQEIIIQNFRAKPGTKMANAPEPDLADLQWTIAAARLIFGPGMSIQAPPNLSNGGAG-LIAAGINDWGGVSPVTPDHVNPEAPWPHLDQLATDTAESGKILVERLGVY 350
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: UPI00195506CE (5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH n=1 Tax=Roseovarius amoyensis TaxID=2211448 RepID=UPI00195506CE) HSP 1 Score: 337 bits (864), Expect = 9.870e-109 Identity = 169/220 (76.82%), Postives = 186/220 (84.55%), Query Frame = 1 Query: 1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660 LRAMA LVFRETGL PHLNPG+M A EIA+LR VSVSMGIMLE+ S RL E G CH GSPDK+P VRLE I E GRQ+VPFTSGILIGIGE+R+ERIESLL LR LH+R GH+QEIIIQNFRAKPGTRMA+APEPD+A LQWTIA ARLIFGP M +QAPPNLS L++AGI+DWGGVSPVTPDHVNPEAPWPHL +LA TA GK+LVERL VY Sbjct: 77 LRAMAELVFRETGLFPHLNPGVMNAAEIAALRRVSVSMGIMLETVSVRLSERGGCHFGSPDKDPAVRLETIAEAGRQKVPFTSGILIGIGETRAERIESLLALRNLHDRFGHIQEIIIQNFRAKPGTRMANAPEPDLADLQWTIAAARLIFGPEMPVQAPPNLSERAAG-LVEAGISDWGGVSPVTPDHVNPEAPWPHLNELARATASCGKLLVERLGVY 295
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A1E4ZWW5_9GAMM (FO synthase n=1 Tax=Chromatiales bacterium (ex Bugula neritina AB1) TaxID=1868282 RepID=A0A1E4ZWW5_9GAMM) HSP 1 Score: 334 bits (856), Expect = 7.020e-107 Identity = 164/220 (74.55%), Postives = 189/220 (85.91%), Query Frame = 1 Query: 1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660 L A+A LV+RETGLLPHLNPG+MT EIASLREVSVSMGIMLESTS +L++ G CH GSPDK P+VRL I G VPFTSGILIGIGE+R++RIESLL LR+LHE+HGHLQEII+QNF+AKPGT MA+A EPD+A LQW+IAVARLIFG MSIQAPPNLS G L++AGINDWGGVSP+TPDHVNPEAPWPHL+DL+A+TA GK+LVERL +Y Sbjct: 129 LCAVAGLVYRETGLLPHLNPGVMTEAEIASLREVSVSMGIMLESTSGKLLKRGGCHFGSPDKNPQVRLATINSAGELGVPFTSGILIGIGETRADRIESLLALRKLHEQHGHLQEIIVQNFKAKPGTLMANATEPDLAELQWSIAVARLIFGAQMSIQAPPNLSAGHTVALVEAGINDWGGVSPLTPDHVNPEAPWPHLDDLSADTAKAGKVLVERLGIY 348
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A2E2YDE8_9PROT (FO synthase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E2YDE8_9PROT) HSP 1 Score: 332 bits (850), Expect = 6.670e-106 Identity = 162/220 (73.64%), Postives = 188/220 (85.45%), Query Frame = 1 Query: 1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660 LRAMA +VF ET LLPHLNPGIM A +I++LREVSVSMGIMLES+S RLM G CHHGSPDK P+VR+ I+E GRQ+VPFTSGILIGIGE+++ERIE+LL LR HER+GH+QEII+QNFRAK GT MA++ EPD+A LQWTIA+ARL+FGP MSIQAPPNLS +LI AGINDWGGVSPVTPDHVNPEAPWPHL+ LA +TA KILVERL++Y Sbjct: 117 LRAMALMVFEETALLPHLNPGIMEASDISALREVSVSMGIMLESSSERLMAKGMCHHGSPDKAPKVRIATIDEAGRQKVPFTSGILIGIGETKAERIETLLALRDSHERYGHIQEIIVQNFRAKVGTLMANSDEPDLADLQWTIALARLVFGPDMSIQAPPNLSFNDASKLIMAGINDWGGVSPVTPDHVNPEAPWPHLDSLALQTAQQDKILVERLSIY 336
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A7V9F967_9CHLR (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9F967_9CHLR) HSP 1 Score: 320 bits (820), Expect = 9.040e-106 Identity = 160/217 (73.73%), Postives = 180/217 (82.95%), Query Frame = 1 Query: 10 MAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660 +A LV RETGLLPH+NPG+MTAEEIA+LR VSVS GIMLES S RL E G H GSPDK+P VRLE + G Q+VPFTSGILIGIGE+R ER+ESLL LR LH+R+GH+QE+IIQNFRAKPGTRMA+APEPD+ L WTIAVAR+IFG M+IQAPPNLS LI AG+NDWGGVSPVTPDHVNPEAPWPHLEDL TA GK+L+ERLAVY Sbjct: 136 VADLVLRETGLLPHVNPGVMTAEEIAALRRVSVSQGIMLESISQRLTERGGPHFGSPDKDPSVRLETMRMAGEQQVPFTSGILIGIGETRLERVESLLALRDLHKRYGHIQEVIIQNFRAKPGTRMANAPEPDLDDLLWTIAVARIIFGTEMNIQAPPNLSPESYPRLIAAGLNDWGGVSPVTPDHVNPEAPWPHLEDLRQHTAAAGKLLIERLAVY 352
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: D6U1E6_9CHLR (FO synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 TaxID=485913 RepID=D6U1E6_9CHLR) HSP 1 Score: 331 bits (848), Expect = 1.870e-105 Identity = 165/220 (75.00%), Postives = 186/220 (84.55%), Query Frame = 1 Query: 1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660 L MA LVFRETGLLPH NPG+MTA+EIA LR VSVS GIMLES S RL E G H+GSPDK+P+VRLE I G +VPFTSGILIGIGE+R ERIESLL LR LH+ +GH+QEIIIQNFRAKPGTRMA+APEPD+ L WT+A+ARLIFG TM+IQAPPNLS G ++L+ AG+NDWGGVSPVTPDHVNPEA WPHLE+LAA TA+ GKILVERLAVY Sbjct: 138 LAEMAELVFRETGLLPHANPGVMTADEIALLRRVSVSQGIMLESASERLGERGGAHYGSPDKQPQVRLETIRLAGELKVPFTSGILIGIGETRQERIESLLALRTLHQHYGHIQEIIIQNFRAKPGTRMANAPEPDLDDLLWTLAIARLIFGGTMNIQAPPNLSPGVYQQLVSAGLNDWGGVSPVTPDHVNPEARWPHLEELAARTAETGKILVERLAVY 357
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A3D5PHQ2_9RHOB (FO synthase n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A3D5PHQ2_9RHOB) HSP 1 Score: 325 bits (834), Expect = 9.050e-104 Identity = 164/220 (74.55%), Postives = 181/220 (82.27%), Query Frame = 1 Query: 1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660 L AMA LV ETGLLPH NPG+MT E+A LREVSVSMGIMLESTS RLM+ G CH GSPDK+P VRLE I G ++PFTSGILIGIGE+R++RIESLL LR LHE GH+QEIIIQNFRAKP T+MAD PEPD+A LQWTIA+AR+IFG MSIQAPPNLS GG LI AGINDWGGVSPVTPDHVNPEAPWP L+ LA +TA GKILVERL +Y Sbjct: 132 LHAMAELVINETGLLPHFNPGVMTRNELAKLREVSVSMGIMLESTSLRLMQQGGCHFGSPDKDPAVRLETIRHAGELKIPFTSGILIGIGETRADRIESLLALRDLHEEFGHIQEIIIQNFRAKPNTKMADVPEPDLADLQWTIAIARVIFGADMSIQAPPNLSDGGAG-LIAAGINDWGGVSPVTPDHVNPEAPWPLLDHLADDTAGCGKILVERLGIY 350
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A3D3UEJ6_9PROT (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (Fragment) n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UEJ6_9PROT) HSP 1 Score: 313 bits (802), Expect = 3.510e-103 Identity = 155/220 (70.45%), Postives = 179/220 (81.36%), Query Frame = 1 Query: 1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660 L+AMA LV ET LLPHLNPG+M+A ++ +LR V+ SMGIMLES +PRL + G H+GSPDK P VRL I G VPFTSGILIGIGE+R+ER+ SLL LR LH+ HGHLQE+IIQNFRAKPGT+MA APEPD+ L WTIAVAR++FG M+IQAPPNLS G + ++IDAGINDWGGVSPVTPD VNPEAPWPHLEDLA ETA GK+LVERL VY Sbjct: 134 LQAMAKLVADETTLLPHLNPGLMSAADLVALRPVAASMGIMLESAAPRLCDKGMPHYGSPDKAPAVRLAAIARAGEAAVPFTSGILIGIGETRAERVASLLALRDLHDAHGHLQEVIIQNFRAKPGTKMAHAPEPDLEELLWTIAVARILFGAAMNIQAPPNLSPGVLPKIIDAGINDWGGVSPVTPDFVNPEAPWPHLEDLARETAAAGKLLVERLTVY 353
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A2E5L2X1_9PROT (FO synthase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5L2X1_9PROT) HSP 1 Score: 322 bits (825), Expect = 2.440e-102 Identity = 158/220 (71.82%), Postives = 183/220 (83.18%), Query Frame = 1 Query: 1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660 LRAMA LVF ETGLLPHLNPG+M AEEI +LRE SVSMGIMLESTS RL+E G CH+GSPDK+P +RL+ I+E GRQ+VPFT+G+LIGIGE+R ERIE+LL LR H H+QEII+QNFRAK T MA++ EP + LQWTIAVARLIFG MSIQAPPNLS ++LI AGINDWGGVSP+TPDHVNPEAPWPHL+ LA ETA+ GK LVERL++Y Sbjct: 102 LRAMALLVFEETGLLPHLNPGVMAAEEIVNLREASVSMGIMLESTSERLLEKGMCHYGSPDKDPNIRLKTIKEAGRQKVPFTTGLLIGIGENRRERIETLLVLREAHREFEHIQEIIVQNFRAKADTIMAESEEPSLEDLQWTIAVARLIFGSQMSIQAPPNLSYTEAKKLIGAGINDWGGVSPLTPDHVNPEAPWPHLDRLAEETAEEGKTLVERLSIY 321
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Match: A0A6P2BJJ5_9GAMM (FO synthase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6P2BJJ5_9GAMM) HSP 1 Score: 323 bits (828), Expect = 3.000e-102 Identity = 156/220 (70.91%), Postives = 181/220 (82.27%), Query Frame = 1 Query: 1 LRAMAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGQCHHGSPDKEPRVRLEMIEECGRQRVPFTSGILIGIGESRSERIESLLELRRLHERHGHLQEIIIQNFRAKPGTRMADAPEPDIAALQWTIAVARLIFGPTMSIQAPPNLSTGGVRELIDAGINDWGGVSPVTPDHVNPEAPWPHLEDLAAETADHGKILVERLAVY 660 L A A VF ETGLLPHLNPG ++ EE A LR+VS SMGIMLES + RL E G HHGSPDK P VRLE +E+ GR RVPFT+GILIGIGE+R+ERIESLL +R H+RHGH+QE+IIQNFRAKPGTRMA APEPD+ + WT+A+AR++FGP MS+QAPPNLS G + L+DAGINDWGGVSPVTPD+VNPEAPWPHLE LA ETA GK+L ERL +Y Sbjct: 137 LEAAARAVFEETGLLPHLNPGNLSPEEFARLRKVSASMGIMLESAAERLTEKGMPHHGSPDKIPAVRLETLEQAGRARVPFTTGILIGIGETRAERIESLLAIRDSHDRHGHIQEVIIQNFRAKPGTRMASAPEPDLEEMLWTLAMARIVFGPDMSLQAPPNLSPGVLPRLVDAGINDWGGVSPVTPDYVNPEAPWPHLEQLARETAGAGKLLHERLTIY 356 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102425.515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102425.515.1 >prot_M-pyrifera_M_contig102425.515.1 ID=prot_M-pyrifera_M_contig102425.515.1|Name=mRNA_M-pyrifera_M_contig102425.515.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=217bp MAHLVFRETGLLPHLNPGIMTAEEIASLREVSVSMGIMLESTSPRLMEPGback to top mRNA from alignment at M-pyrifera_M_contig102425:1..660- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102425.515.1 ID=mRNA_M-pyrifera_M_contig102425.515.1|Name=mRNA_M-pyrifera_M_contig102425.515.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig102425:1..660- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102425:1..660- >mRNA_M-pyrifera_M_contig102425.515.1 ID=mRNA_M-pyrifera_M_contig102425.515.1|Name=mRNA_M-pyrifera_M_contig102425.515.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1302bp|location=Sequence derived from alignment at M-pyrifera_M_contig102425:1..660- (Macrocystis pyrifera P11B4 male)back to top |