mRNA_M-pyrifera_M_contig102419.510.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102419.510.1 vs. uniprot
Match: D7G3H3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3H3_ECTSI) HSP 1 Score: 70.9 bits (172), Expect = 4.020e-13 Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 1 Query: 37 RRVLELGAGMGVCGLIAHKTGAAAVVLTDGDASALKYLNEVRQTN 171 RRVLELG+GMGV GLIAHKTGAAAVV+TDGD+S +KYL E TN Sbjct: 84 RRVLELGSGMGVAGLIAHKTGAAAVVMTDGDSSVIKYLRENISTN 128
BLAST of mRNA_M-pyrifera_M_contig102419.510.1 vs. uniprot
Match: A0A7S1Y3T4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y3T4_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.700e-9 Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 31 RARRVLELGAGMGVCGLIAHKTGAAAVVLTDGDASALKYLNEVRQTN 171 R RRVLELGAG+G+CG++AHK GA VVLTDGD LK + + + N Sbjct: 100 RNRRVLELGAGLGLCGIVAHKLGAKQVVLTDGDTDTLKEMKQNVEAN 146
BLAST of mRNA_M-pyrifera_M_contig102419.510.1 vs. uniprot
Match: F0XZE4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZE4_AURAN) HSP 1 Score: 59.3 bits (142), Expect = 7.530e-9 Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 1 Query: 1 ALLLLRPQHRRARRVLELGAGMGVCGLIAHKTGAAAVVLTDGDASALKYLNEVRQTN 171 A L RP+ R RRVLELGAG G+C ++A GAA VV TDGDA A+ +L V + N Sbjct: 91 AYLAARPELCRGRRVLELGAGCGLCSMVASLGGAARVVATDGDAGAVAHLEAVLRAN 147
BLAST of mRNA_M-pyrifera_M_contig102419.510.1 vs. uniprot
Match: A0A7S4VLM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VLM9_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 2.590e-8 Identity = 28/55 (50.91%), Postives = 38/55 (69.09%), Query Frame = 1 Query: 7 LLLRPQHRRARRVLELGAGMGVCGLIAHKTGAAAVVLTDGDASALKYLNEVRQTN 171 L L P R + V+ELGAG+G+CG++AHK GA V+LTDGD+ LK L ++N Sbjct: 153 LSLNPFLIRGKSVIELGAGLGLCGILAHKIGAQNVILTDGDSDVLKELRSNVKSN 207
BLAST of mRNA_M-pyrifera_M_contig102419.510.1 vs. uniprot
Match: A0A7R9WE79_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WE79_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 2.760e-7 Identity = 24/45 (53.33%), Postives = 35/45 (77.78%), Query Frame = 1 Query: 37 RRVLELGAGMGVCGLIAHKTGAAAVVLTDGDASALKYLNEVRQTN 171 R+VLELGAG+G+CG++AH GA VVLTDGD ++L+ + ++N Sbjct: 122 RKVLELGAGLGLCGIVAHHLGAERVVLTDGDTNSLREMRRNVESN 166
BLAST of mRNA_M-pyrifera_M_contig102419.510.1 vs. uniprot
Match: A0A7S3V6Q2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6Q2_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 8.830e-7 Identity = 22/40 (55.00%), Postives = 32/40 (80.00%), Query Frame = 1 Query: 31 RARRVLELGAGMGVCGLIAHKTGAAAVVLTDGDASALKYL 150 + + V+ELGAG+G+CG++AHK GA+ V+LTDGD LK + Sbjct: 93 QGKTVVELGAGLGLCGIVAHKHGASRVILTDGDTDTLKNM 132
BLAST of mRNA_M-pyrifera_M_contig102419.510.1 vs. uniprot
Match: A0A7S0RVC0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RVC0_9CHLO) HSP 1 Score: 52.8 bits (125), Expect = 1.180e-6 Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 1 Query: 7 LLLRPQHRRARRVLELGAGMGVCGLIAHKTGAAAVVLTDGDASALKYLNEVRQTN 171 L+ PQ +RVLE+GAG GVCG++A K GA+ VVLTD + L+ L E N Sbjct: 186 LVAHPQLVAGQRVLEIGAGCGVCGILAAKLGASEVVLTDVEGPVLRNLRECMNMN 240
BLAST of mRNA_M-pyrifera_M_contig102419.510.1 vs. uniprot
Match: A0A8J2T193_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T193_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 1.540e-6 Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 7 LLLRPQHRRARRVLELGAGMGVCGLIAHKTGAAAVVLTDGDASALKYLNE 156 L +RP R RVLELGAG G+ GL+A + GAA V+LTDGDA A++ L + Sbjct: 297 LTIRPGVVRGCRVLELGAGAGLPGLVAARCGAAEVLLTDGDARAVRLLEK 346
BLAST of mRNA_M-pyrifera_M_contig102419.510.1 vs. uniprot
Match: A0A7S2PA65_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PA65_9STRA) HSP 1 Score: 52.0 bits (123), Expect = 2.000e-6 Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 1 Query: 7 LLLRPQHRRARRVLELGAGMGVCGLIAHKTGAAAVVLTDGDASALKYL 150 L +P +RVLE+GAG+G+CG+ AH GA V++TDGD+ ALK + Sbjct: 52 LQAQPDILLQKRVLEVGAGLGLCGITAHWLGAKEVIMTDGDSHALKQM 99
BLAST of mRNA_M-pyrifera_M_contig102419.510.1 vs. uniprot
Match: A0A662WUX6_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUX6_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 4.950e-6 Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 1 Query: 19 PQHRRARRVLELGAGMGVCGLIAHKTGAAAVVLTDGDASALKYLNEVRQTN 171 P+ R +RVLELGAG G+C ++A K GAA + TDGDA ++ L + + N Sbjct: 103 PELVRGKRVLELGAGTGICSIVAFKLGAARCLATDGDAEVVELLAKNVEVN 153 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102419.510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102419.510.1 >prot_M-pyrifera_M_contig102419.510.1 ID=prot_M-pyrifera_M_contig102419.510.1|Name=mRNA_M-pyrifera_M_contig102419.510.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=57bp ALLLLRPQHRRARRVLELGAGMGVCGLIAHKTGAAAVVLTDGDASALKYLback to top mRNA from alignment at M-pyrifera_M_contig102419:484..654- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102419.510.1 ID=mRNA_M-pyrifera_M_contig102419.510.1|Name=mRNA_M-pyrifera_M_contig102419.510.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=171bp|location=Sequence derived from alignment at M-pyrifera_M_contig102419:484..654- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102419:484..654- >mRNA_M-pyrifera_M_contig102419.510.1 ID=mRNA_M-pyrifera_M_contig102419.510.1|Name=mRNA_M-pyrifera_M_contig102419.510.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig102419:484..654- (Macrocystis pyrifera P11B4 male)back to top |