mRNA_M-pyrifera_M_contig102356.503.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig102356.503.1
Unique NamemRNA_M-pyrifera_M_contig102356.503.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig102356.503.1 vs. uniprot
Match: A0A5A8DFJ1_CAFRO (mRNA (guanine-N(7))-methyltransferase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DFJ1_CAFRO)

HSP 1 Score: 135 bits (339), Expect = 3.420e-34
Identity = 72/130 (55.38%), Postives = 87/130 (66.92%), Query Frame = 1
Query:    7 VLDLARGRLGDLAKWRAAQVQEYVGVDISPEQIRLAAGRLSQQQRRDGTAMRARLAVADLGACSLASSPILHPGEKFDAISIQFALHYVFRTEHTAVRFFQNIRDRLTPNGVFIGTMPDPDVLVRMIRDQ 396
            VLDLA G+LGDLAKWR   V+ YVG+DIS E +   A R S       + M  RL  ADLGA  L   P L PGE+FD ISIQFALHY+F++E  A+ FF NIRDRL P GVF+GT+ D   LVR +R++
Sbjct:  133 VLDLACGKLGDLAKWREKGVRRYVGIDISSESLANGAKRFSSDNS-GASMMTGRLVCADLGAVDLRCFPALAPGEQFDCISIQFALHYLFQSEARALTFFANIRDRLRPGGVFLGTIADSHALVRAMREE 261          
BLAST of mRNA_M-pyrifera_M_contig102356.503.1 vs. uniprot
Match: A0A196SCK7_BLAHN (mRNA (guanine-N(7))-methyltransferase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SCK7_BLAHN)

HSP 1 Score: 97.1 bits (240), Expect = 4.070e-21
Identity = 57/132 (43.18%), Postives = 72/132 (54.55%), Query Frame = 1
Query:    1 SRVLDLARGRLGDLAKWRAAQVQEYVGVDISPEQIRLAAGRLSQQQRRDGTAMRARLAVADLGACSLASSPILHPGEKFDAISIQFALHYVFRTEHTAVRFFQNIRDRLTPNGVFIGTMPDPDVLVRMIRDQ 396
            SRVLDLA G+ GDL KW+   +  Y GVD++   IR A  R    +        AR AVA+LG   L+S   L  GE+FD +S QFA+HY+F  E     F   I   L P G FI T+ D + LVR IR +
Sbjct:  138 SRVLDLACGKGGDLKKWKEQHISSYTGVDVADGSIRDAVERF---RNMTNPGFPARFAVANLGTSDLSS--FLETGERFDVVSCQFAMHYMFEQESWIRTFLHTISSHLVPGGHFIATLADCNALVRSIRSR 264          
BLAST of mRNA_M-pyrifera_M_contig102356.503.1 vs. uniprot
Match: UPI000711FE4E (mRNA cap guaninemethyltransferase n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711FE4E)

HSP 1 Score: 95.9 bits (237), Expect = 7.790e-21
Identity = 57/129 (44.19%), Postives = 73/129 (56.59%), Query Frame = 1
Query:    4 RVLDLARGRLGDLAKWRAAQVQEYVGVDISPEQIRLAAGRLSQQQRRDGTAMRARLAVADLGACSLASSPILHPGEKFDAISIQFALHYVFRTEHTAVRFFQNIRDRLTPNGVFIGTMPDPDVLVRMIR 390
            RVLDLA G+ GDL KW+     EYVGVDI+   I  A  R  + +   G    AR  VA+LG C L  S  L P E+FD +S QFA+HY+F  E     FF+N+   L   G FI T+ D D + R++R
Sbjct:   81 RVLDLACGKGGDLKKWKEQHPSEYVGVDIAEGSIHDAVRRFKEIR---GVNFPARFGVANLGTCDL--SGWLDPSERFDVVSCQFAMHYMFEKESMLRCFFKNVSHFLKVGGYFIATIADCDSVCRLLR 204          
BLAST of mRNA_M-pyrifera_M_contig102356.503.1 vs. uniprot
Match: A0A1Y1HWI6_KLENI (mRNA (guanine-N(7))-methyltransferase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWI6_KLENI)

HSP 1 Score: 95.1 bits (235), Expect = 8.830e-21
Identity = 63/133 (47.37%), Postives = 72/133 (54.14%), Query Frame = 1
Query:    4 RVLDLARGRLGDLAKWRAAQVQEYVGVDI---SPEQIRLAAGRLSQQQRRDGTAMRARLAVADLGACSLASSPILHPGEKFDAISIQFALHYVFRTEHTAVRFFQNIRDRLTPNGVFIGTMPDPDVLVRMIRD 393
            RVLDLA G+ GDL KW  A++  YVGVDI   S E  RL    +    R       ARL  AD    SL     L     FD IS QFALHY F  E  A R  QN+   L P GVFIGT+PD +VLVR +R+
Sbjct:   54 RVLDLACGKGGDLVKWDKARISHYVGVDIAKGSVEDARLRYEGVGSNGRGLPYHFSARLLCADCWKVSLEEP--LKDDAPFDIISCQFALHYSFSEEARARRALQNVSSLLRPGGVFIGTIPDANVLVRKLRE 184          
BLAST of mRNA_M-pyrifera_M_contig102356.503.1 vs. uniprot
Match: A0A4S8IJA5_MUSBA (mRNA cap guanine-N7 methyltransferase n=4 Tax=Musa TaxID=4640 RepID=A0A4S8IJA5_MUSBA)

HSP 1 Score: 93.6 bits (231), Expect = 4.950e-20
Identity = 58/133 (43.61%), Postives = 74/133 (55.64%), Query Frame = 1
Query:    7 VLDLARGRLGDLAKWRAAQVQEYVGVDISPEQIRLAAGRLS----QQQRRDGTAMRARLAVADLGACSLASSPILHPGEKFDAISIQFALHYVFRTEHTAVRFFQNIRDRLTPNGVFIGTMPDPDVLVRMIRD 393
            VLD+A G+ GDL KW  A++  YVGVDI+   I+    R +    QQQRR      ARL  AD     L     LH    FD  S QFALHY + TE  A +   N+   L P G+FIGTMPD +V+V+ +R+
Sbjct:   87 VLDIACGKGGDLIKWDKARIGYYVGVDIAEGSIKDCRTRYNGDSDQQQRRKKFGFPARLICADFYEVRL--DKYLHDDAPFDICSCQFALHYSWSTEARARQALANVSALLRPGGIFIGTMPDANVIVKRLRE 217          
BLAST of mRNA_M-pyrifera_M_contig102356.503.1 vs. uniprot
Match: UPI001929DE7D (mRNA cap guanine-N7 methyltransferase 1 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929DE7D)

HSP 1 Score: 92.4 bits (228), Expect = 1.230e-19
Identity = 57/132 (43.18%), Postives = 73/132 (55.30%), Query Frame = 1
Query:    7 VLDLARGRLGDLAKWRAAQVQEYVGVDISPEQIRLAAGRLS---QQQRRDGTAMRARLAVADLGACSLASSPILHPGEKFDAISIQFALHYVFRTEHTAVRFFQNIRDRLTPNGVFIGTMPDPDVLVRMIRD 393
            VLD A G+ GDL KW  AQ+  YVGVDI+   IR    R +   +QQRR   +  ARL  AD     L     L     +D  S QFALHY + TE  A R   NI   L P G+F+GTMPD +V+++ +R+
Sbjct:   79 VLDFACGKGGDLIKWEKAQIGYYVGVDIAEGSIRDCKTRYNGDAEQQRRKKFSFPARLICADCYEARL--DKYLEDDGPYDICSCQFALHYSWSTEARARRALANISALLRPGGIFVGTMPDANVIIKKLRE 208          
BLAST of mRNA_M-pyrifera_M_contig102356.503.1 vs. uniprot
Match: UPI00053C41A6 (mRNA cap guanine-N7 methyltransferase 1 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C41A6)

HSP 1 Score: 91.7 bits (226), Expect = 2.820e-19
Identity = 56/133 (42.11%), Postives = 73/133 (54.89%), Query Frame = 1
Query:    7 VLDLARGRLGDLAKWRAAQVQEYVGVDISPEQI----RLAAGRLSQQQRRDGTAMRARLAVADLGACSLASSPILHPGEKFDAISIQFALHYVFRTEHTAVRFFQNIRDRLTPNGVFIGTMPDPDVLVRMIRD 393
            VLDLA G+ GDL KW  A++  YVGVDI+   I    +   G   Q QRR   +  ARL   D     L    IL     FD  S QFA+HY + TE  A R  +N+   L P G+FIGTMPD +V+++ +R+
Sbjct:   94 VLDLACGKGGDLIKWDKAKIGYYVGVDIAEGSIEDCRKRYNGDADQNQRRKKFSFPARLICGDCFEIEL--DKILKEDAPFDICSCQFAMHYSWTTEERARRALENVSALLRPGGIFIGTMPDANVIIKKLRE 224          
BLAST of mRNA_M-pyrifera_M_contig102356.503.1 vs. uniprot
Match: A0A507EFA8_9FUNG (mRNA cap guanine-N7 methyltransferase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EFA8_9FUNG)

HSP 1 Score: 90.5 bits (223), Expect = 4.740e-19
Identity = 53/128 (41.41%), Postives = 69/128 (53.91%), Query Frame = 1
Query:    7 VLDLARGRLGDLAKWRAAQVQEYVGVDISPEQIRLAAGRLSQQQRRDGTAMRARLAVADLGACSLASSPILHPGEKFDAISIQFALHYVFRTEHTAVRFFQNIRDRLTPNGVFIGTMPDPDVLVRMIR 390
            VLD   G+ GDL KW  AQ+   VGVDI+   ++ A  R S  +   G   RA+    D     +A    L PG +FD +S QFALHY F TE  A     NI   + P GVFIGT+PD + +V+ +R
Sbjct:   84 VLDFCCGKGGDLLKWNKAQISHLVGVDIADVSVQQAQERYSSGR---GNRFRAQFFAMDCFGSPIADK--LPPGHEFDLVSCQFALHYSFETEERARMGLTNITKNMKPGGVFIGTIPDANWIVKKLR 206          
BLAST of mRNA_M-pyrifera_M_contig102356.503.1 vs. uniprot
Match: MCES1_ORYSJ (mRNA cap guanine-N7 methyltransferase 1 n=19 Tax=Poaceae TaxID=4479 RepID=MCES1_ORYSJ)

HSP 1 Score: 90.5 bits (223), Expect = 6.750e-19
Identity = 58/132 (43.94%), Postives = 74/132 (56.06%), Query Frame = 1
Query:    7 VLDLARGRLGDLAKWRAAQVQEYVGVDISPEQIRLAAGRLS---QQQRRDGTAMRARLAVADLGACSLASSPILHPGEKFDAISIQFALHYVFRTEHTAVRFFQNIRDRLTPNGVFIGTMPDPDVLVRMIRD 393
            VLDLA G+ GDL KW  A+V  YVGVDI+   I+    R +    QQRR   +  ARL  AD     L     L+    FD  S QFALHY + TE  A +   N+   L P GVFIGTMPD +V+++ +R+
Sbjct:   88 VLDLACGKGGDLIKWDKAKVGYYVGVDIAEGSIKDCMTRYNGDTDQQRRKKFSFPARLICADCYEARLDEH--LYEDAPFDICSCQFALHYSWSTEARARQALANVSALLRPGGVFIGTMPDANVIIKRLRE 217          
BLAST of mRNA_M-pyrifera_M_contig102356.503.1 vs. uniprot
Match: A0A0D9X507_9ORYZ (mRNA cap guanine-N7 methyltransferase n=4 Tax=BOP clade TaxID=359160 RepID=A0A0D9X507_9ORYZ)

HSP 1 Score: 90.1 bits (222), Expect = 7.900e-19
Identity = 57/132 (43.18%), Postives = 74/132 (56.06%), Query Frame = 1
Query:    7 VLDLARGRLGDLAKWRAAQVQEYVGVDISPEQIRLAAGRLS---QQQRRDGTAMRARLAVADLGACSLASSPILHPGEKFDAISIQFALHYVFRTEHTAVRFFQNIRDRLTPNGVFIGTMPDPDVLVRMIRD 393
            VLDLA G+ GDL KW  A+V  YVGVDI+   I+    R +    QQRR   +  ARL  AD     L     L+    FD  S QFALHY + TE  A +   N+   L P G+FIGTMPD +V+++ +R+
Sbjct:   91 VLDLACGKGGDLIKWDKARVGYYVGVDIAEGSIKDCMTRYNGDTDQQRRKKFSFPARLICADCYEARLDEH--LYEDAPFDICSCQFALHYSWSTEARARQALANVSALLRPGGIFIGTMPDANVIIKRLRE 220          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102356.503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DFJ1_CAFRO3.420e-3455.38mRNA (guanine-N(7))-methyltransferase n=4 Tax=Cafe... [more]
A0A196SCK7_BLAHN4.070e-2143.18mRNA (guanine-N(7))-methyltransferase n=1 Tax=Blas... [more]
UPI000711FE4E7.790e-2144.19mRNA cap guaninemethyltransferase n=1 Tax=Blastocy... [more]
A0A1Y1HWI6_KLENI8.830e-2147.37mRNA (guanine-N(7))-methyltransferase n=1 Tax=Kleb... [more]
A0A4S8IJA5_MUSBA4.950e-2043.61mRNA cap guanine-N7 methyltransferase n=4 Tax=Musa... [more]
UPI001929DE7D1.230e-1943.18mRNA cap guanine-N7 methyltransferase 1 n=1 Tax=Di... [more]
UPI00053C41A62.820e-1942.11mRNA cap guanine-N7 methyltransferase 1 n=1 Tax=Ta... [more]
A0A507EFA8_9FUNG4.740e-1941.41mRNA cap guanine-N7 methyltransferase n=1 Tax=Powe... [more]
MCES1_ORYSJ6.750e-1943.94mRNA cap guanine-N7 methyltransferase 1 n=19 Tax=P... [more]
A0A0D9X507_9ORYZ7.900e-1943.18mRNA cap guanine-N7 methyltransferase n=4 Tax=BOP ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig102356contigM-pyrifera_M_contig102356:263..658 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score93.2
Seed ortholog evalue9.7e-17
Seed eggNOG ortholog4641.GSMUA_Achr9P29970_001
KEGG rclassRC00003,RC00336
KEGG koko:K00565
KEGG ReactionR03805
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
GOsGO:0001510,GO:0003674,GO:0003824,GO:0004482,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005845,GO:0006139,GO:0006370,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008174,GO:0008757,GO:0009451,GO:0009452,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016740,GO:0016741,GO:0032259,GO:0032991,GO:0034518,GO:0034641,GO:0036260,GO:0036265,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0080009,GO:0090304,GO:0106005,GO:0140098,GO:1901360
EggNOG free text desc.Belongs to the class I-like SAM-binding methyltransferase superfamily. mRNA cap 0 methyltransferase family
EggNOG OGs37HQZ@33090,3GCWB@35493,3KXRH@4447,KOG1975@1,KOG1975@2759
EC2.1.1.56
COG Functional cat.A
Best tax levelLiliopsida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019
Exons1
Model size396
Cds size396
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815525.986719-CDS-M-pyrifera_M_contig102356:262..6581622815525.986719-CDS-M-pyrifera_M_contig102356:262..658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102356 263..658 -
1692277449.317616-CDS-M-pyrifera_M_contig102356:262..6581692277449.317616-CDS-M-pyrifera_M_contig102356:262..658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig102356 263..658 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig102356.503.1prot_M-pyrifera_M_contig102356.503.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig102356 263..658 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig102356.503.1

>prot_M-pyrifera_M_contig102356.503.1 ID=prot_M-pyrifera_M_contig102356.503.1|Name=mRNA_M-pyrifera_M_contig102356.503.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
SRVLDLARGRLGDLAKWRAAQVQEYVGVDISPEQIRLAAGRLSQQQRRDG
TAMRARLAVADLGACSLASSPILHPGEKFDAISIQFALHYVFRTEHTAVR
FFQNIRDRLTPNGVFIGTMPDPDVLVRMIRDQ
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mRNA from alignment at M-pyrifera_M_contig102356:263..658-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig102356.503.1 ID=mRNA_M-pyrifera_M_contig102356.503.1|Name=mRNA_M-pyrifera_M_contig102356.503.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig102356:263..658- (Macrocystis pyrifera P11B4 male)
AGTCGCGTGTTGGACCTGGCCCGTGGAAGACTCGGCGATTTGGCCAAATG GCGTGCCGCGCAAGTGCAGGAGTATGTTGGGGTGGACATTTCCCCGGAGC AGATCCGTCTTGCCGCCGGTCGTTTGTCGCAGCAACAACGCCGTGATGGA ACGGCGATGCGAGCAAGATTGGCAGTGGCTGATTTGGGGGCTTGCTCGCT TGCCTCCAGTCCTATCCTGCATCCCGGGGAGAAATTCGACGCCATTTCCA TCCAATTCGCGCTCCATTACGTATTTCGCACCGAACACACTGCGGTGCGA TTCTTCCAAAACATCAGAGACAGACTCACGCCCAATGGAGTCTTCATCGG AACCATGCCTGACCCAGATGTGCTCGTGAGAATGATCAGAGACCAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig102356:263..658-

>mRNA_M-pyrifera_M_contig102356.503.1 ID=mRNA_M-pyrifera_M_contig102356.503.1|Name=mRNA_M-pyrifera_M_contig102356.503.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig102356:263..658- (Macrocystis pyrifera P11B4 male)
AGTCGCGTGTTGGACCTGGCCCGTGGAAGACTCGGCGATTTGGCCAAATG
GCGTGCCGCGCAAGTGCAGGAGTATGTTGGGGTGGACATTTCCCCGGAGC
AGATCCGTCTTGCCGCCGGTCGTTTGTCGCAGCAACAACGCCGTGATGGA
ACGGCGATGCGAGCAAGATTGGCAGTGGCTGATTTGGGGGCTTGCTCGCT
TGCCTCCAGTCCTATCCTGCATCCCGGGGAGAAATTCGACGCCATTTCCA
TCCAATTCGCGCTCCATTACGTATTTCGCACCGAACACACTGCGGTGCGA
TTCTTCCAAAACATCAGAGACAGACTCACGCCCAATGGAGTCTTCATCGG
AACCATGCCTGACCCAGATGTGCTCGTGAGAATGATCAGAGACCAAAGTC
GCGTGTTGGACCTGGCCCGTGGAAGACTCGGCGATTTGGCCAAATGGCGT
GCCGCGCAAGTGCAGGAGTATGTTGGGGTGGACATTTCCCCGGAGCAGAT
CCGTCTTGCCGCCGGTCGTTTGTCGCAGCAACAACGCCGTGATGGAACGG
CGATGCGAGCAAGATTGGCAGTGGCTGATTTGGGGGCTTGCTCGCTTGCC
TCCAGTCCTATCCTGCATCCCGGGGAGAAATTCGACGCCATTTCCATCCA
ATTCGCGCTCCATTACGTATTTCGCACCGAACACACTGCGGTGCGATTCT
TCCAAAACATCAGAGACAGACTCACGCCCAATGGAGTCTTCATCGGAACC
ATGCCTGACCCAGATGTGCTCGTGAGAATGATCAGAGACCAA
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