mRNA_M-pyrifera_M_contig102350.501.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102350.501.1 vs. uniprot
Match: A0A517PTG6_9PLAN (Cation efflux system protein CusB n=7 Tax=Gimesia TaxID=1649453 RepID=A0A517PTG6_9PLAN) HSP 1 Score: 436 bits (1121), Expect = 1.090e-147 Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1 Query: 1 DHSVVYVETKPGRFELRNVTLGPMLGDTAVILDGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQPDKKSKEKKGPLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG 660 DHSVVYVETKPGRFELRNVTLGPMLGDTAVILDGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQPDKKSKEKKGPLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG Sbjct: 436 DHSVVYVETKPGRFELRNVTLGPMLGDTAVILDGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQPDKKSKEKKGPLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG 655
BLAST of mRNA_M-pyrifera_M_contig102350.501.1 vs. uniprot
Match: A0A518AAH8_9PLAN (Cation efflux system protein CusB n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AAH8_9PLAN) HSP 1 Score: 360 bits (923), Expect = 6.570e-118 Identity = 178/220 (80.91%), Postives = 201/220 (91.36%), Query Frame = 1 Query: 1 DHSVVYVETKPGRFELRNVTLGPMLGDTAVILDGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQPDKKSKEKKGPLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG 660 D SVVYVET+PGRFELRNV LGP+LG+TAVIL+GVK GE+VATSGNFLIDSQMQLSGKPSLIDP K++P KK++ KKGPLKFDSI+IEKL+G G LEKLYAAYF IQKQFA D+ + ES+ATTLQKLA+QLAQD+ LSPTV+QELQQIA+NAAHLHHLS+KEAR KFKPISHAVV LATQVRG AK+++QHFYCPMVP+GGGDWLQPDLKLVNPYFG Sbjct: 436 DQSVVYVETEPGRFELRNVKLGPLLGETAVILEGVKAGEKVATSGNFLIDSQMQLSGKPSLIDPHKFKPAKKTEPKKGPLKFDSIRIEKLSGENGQLLEKLYAAYFAIQKQFAADKKISESQATTLQKLASQLAQDSGLSPTVKQELQQIADNAAHLHHLSIKEARQKFKPISHAVVTLATQVRGGEAKQSFQHFYCPMVPQGGGDWLQPDLKLVNPYFG 655
BLAST of mRNA_M-pyrifera_M_contig102350.501.1 vs. uniprot
Match: A0A518IGT4_9PLAN (Cation efflux system protein CusB n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IGT4_9PLAN) HSP 1 Score: 320 bits (820), Expect = 1.590e-102 Identity = 161/220 (73.18%), Postives = 183/220 (83.18%), Query Frame = 1 Query: 1 DHSVVYVETKPGRFELRNVTLGPMLGDTAVILDGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQPDKKSKEKKGPLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG 660 DHSVVYVETKPGRFELRNVTLG +LGDTAVIL+GVKPGE+VAT+GNFLIDSQMQLSGKPSLIDP ++ P KK+K K PL+FDS +IE ++G G LEKLYA YF IQKQFA DQ + E +A TL LAAQLAQD+ LS ++ ELQQIA N+ HLHHLSL+EAR KFKPISHAVVKLATQVRG K + HF+CPMVP+GGGDWLQ D KL+NPYFG Sbjct: 438 DHSVVYVETKPGRFELRNVTLGSLLGDTAVILEGVKPGEKVATAGNFLIDSQMQLSGKPSLIDPLRFTPAKKTK-KNTPLQFDSFKIETISGKPGQSLEKLYATYFAIQKQFAADQKITEQQARTLNTLAAQLAQDSPLSQPIKDELQQIANNSEHLHHLSLEEARKKFKPISHAVVKLATQVRGGETKPPFHHFFCPMVPQGGGDWLQSDHKLLNPYFG 656
BLAST of mRNA_M-pyrifera_M_contig102350.501.1 vs. uniprot
Match: A0A517VI32_9PLAN (Cation efflux system protein CusB n=7 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VI32_9PLAN) HSP 1 Score: 308 bits (789), Expect = 6.610e-98 Identity = 158/222 (71.17%), Postives = 180/222 (81.08%), Query Frame = 1 Query: 1 DHSVVYVETKPGRFELRNVTLGPMLGDTAVILDGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQPDKKSKEK--KGPLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG 660 DHSVVYVET+PGRFELRNVTLGPML + AVILDGVK GEQVAT+GNFLIDSQMQLSGKPSLIDPTK+ DKK K K PL+FDSI+IEKL+G G LE LY YF IQKQFA DQ + E +ATTL +LA++LAQ + L T++ EL+Q+A AAHLHHLSL EAR KFKPISHAV+KLATQVRG AK+ Y F+CPMV +G GDWLQ D KL+NPYFG Sbjct: 435 DHSVVYVETEPGRFELRNVTLGPMLRNRAVILDGVKQGEQVATAGNFLIDSQMQLSGKPSLIDPTKFSRDKKKKSKYRNEPLQFDSIRIEKLSGKPGQSLENLYFVYFAIQKQFAADQKISEHQATTLSRLASELAQGSQLDQTIKSELKQVAAYAAHLHHLSLDEARKKFKPISHAVIKLATQVRGDGAKQPYYQFFCPMVSQGEGDWLQKDDKLLNPYFG 656
BLAST of mRNA_M-pyrifera_M_contig102350.501.1 vs. uniprot
Match: A0A517VTX2_9PLAN (Cation efflux system protein CusB n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VTX2_9PLAN) HSP 1 Score: 307 bits (787), Expect = 1.280e-97 Identity = 150/220 (68.18%), Postives = 179/220 (81.36%), Query Frame = 1 Query: 1 DHSVVYVETKPGRFELRNVTLGPMLGDTAVILDGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQPDKKSKEKKGPLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG 660 DHSVVYVETKPGRFELRNVTLGP+LG+ AVIL GVK GE+VATSGNFLIDSQMQLSGKPSLIDPT+Y P++K+K+K GPLKFDSI I+ + G G QLEK+Y YF IQK AGD+ + E +A+ L L+ QLA D+ S VR EL+QI + HLHHLS++EAR FK ISHA+VKLATQ+RG+ K+++ HF+CPMVPEGGGDWLQ D KL+NPYFG Sbjct: 436 DHSVVYVETKPGRFELRNVTLGPLLGNRAVILSGVKKGEKVATSGNFLIDSQMQLSGKPSLIDPTRYVPEEKAKKKSGPLKFDSINIQIIPGQVGEQLEKMYRVYFAIQKSLAGDKKITEEQASALIGLSKQLANDSRFSSPVRVELKQIQTKSEHLHHLSIEEARKNFKSISHAIVKLATQIRGSNTKQSFNHFFCPMVPEGGGDWLQLDEKLINPYFG 655
BLAST of mRNA_M-pyrifera_M_contig102350.501.1 vs. uniprot
Match: A0A2E2CB01_9PLAN (Metal transporter n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2CB01_9PLAN) HSP 1 Score: 307 bits (787), Expect = 2.560e-97 Identity = 155/221 (70.14%), Postives = 182/221 (82.35%), Query Frame = 1 Query: 1 DHSVVYVETKPGRFELRNVTLGPMLGDTAVILDGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQP-DKKSKEKKGPLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG 660 +HSVVYVET+PGRFELRNVTLGPML D AVILDGVKPGEQVAT+GNFLIDSQMQLSGKPSLIDPTKY P ++K + PL+FDS+ +EKL+G G LE+LY+ YF IQ+QFA DQ + E +ATTL KLA +LAQD+ L T+RQEL+Q+A NA HLHHLSL+E R KFK ISHAVVKLA+QVRG A++ Y F+CPMV +G GDWLQ D KL+NPYFG Sbjct: 465 EHSVVYVETEPGRFELRNVTLGPMLRDRAVILDGVKPGEQVATAGNFLIDSQMQLSGKPSLIDPTKYVPGNRKPAYRNEPLQFDSLPVEKLSGQPGQTLERLYSVYFTIQEQFAADQKISEQQATTLNKLATELAQDSQLEQTLRQELEQVAANAGHLHHLSLEEGRKKFKLISHAVVKLASQVRGDGAEQPYYQFFCPMVSQGEGDWLQKDDKLLNPYFG 685
BLAST of mRNA_M-pyrifera_M_contig102350.501.1 vs. uniprot
Match: A0A3C0APZ0_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0APZ0_9PLAN) HSP 1 Score: 272 bits (696), Expect = 1.570e-89 Identity = 138/203 (67.98%), Postives = 164/203 (80.79%), Query Frame = 1 Query: 55 VTLGPMLGDTAVILDGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQP-DKKSKEKKGPLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG 660 +TLGPML D AVILDGVKPGEQVAT+GNFLIDSQMQLSGKPSLIDPTKY P ++K + PL+FDS+ +EKL+G G LE+LY+ YF IQ+QFA DQ + E +ATTL KLA +LAQD+ L T+RQEL+Q+A NA HLHHLSL+E R KFK ISHAVVKLA+QVRG A++ Y F+CPMV +G GDWLQ D KL+NPYFG Sbjct: 1 MTLGPMLRDRAVILDGVKPGEQVATAGNFLIDSQMQLSGKPSLIDPTKYVPGNRKPAYRNEPLQFDSLPVEKLSGQPGQTLERLYSVYFTIQEQFAADQKISEQQATTLNKLATELAQDSQLEQTLRQELEQVAANAGHLHHLSLEEGRKKFKLISHAVVKLASQVRGDGAEQPYYQFFCPMVSQGEGDWLQKDDKLLNPYFG 203
BLAST of mRNA_M-pyrifera_M_contig102350.501.1 vs. uniprot
Match: A0A350KF99_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KF99_9PLAN) HSP 1 Score: 261 bits (667), Expect = 2.590e-85 Identity = 132/190 (69.47%), Postives = 154/190 (81.05%), Query Frame = 1 Query: 97 DGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQPDKKSKE--KKGPLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG 660 DGVK GEQVAT+GNFLIDSQMQLSGKPSLIDPTKY DKK K + PL+F+SI+IEKL+G G LE LY+ YF IQKQFA DQ + E +ATTL +LA++LAQD+ L T+R EL+Q+A NAAHLHHLSL+EAR KFKPISHA+VKLATQVRG AK+ Y F+CPMV +G GDWLQ D KL+NPYFG Sbjct: 1 DGVKQGEQVATAGNFLIDSQMQLSGKPSLIDPTKYSRDKKKKPAYRNEPLQFESIRIEKLSGKPGQSLEHLYSVYFAIQKQFASDQKISEQQATTLNRLASELAQDSQLDQTIRSELKQVAANAAHLHHLSLEEARKKFKPISHAMVKLATQVRGDAAKQPYYQFFCPMVSQGEGDWLQQDDKLLNPYFG 190
BLAST of mRNA_M-pyrifera_M_contig102350.501.1 vs. uniprot
Match: UPI001F0FDFB2 (efflux RND transporter periplasmic adaptor subunit n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI001F0FDFB2) HSP 1 Score: 263 bits (671), Expect = 1.570e-81 Identity = 132/220 (60.00%), Postives = 172/220 (78.18%), Query Frame = 1 Query: 1 DHSVVYVETKPGRFELRNVTLGPMLGDTAVILDGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQPDKKSKEKKGPLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG 660 +HSVVYVET+PGRFELRN+TLGP+L + A++LDG+KPGE+VATSGNFLIDSQMQL+GKPSLIDPT+ P K + PL+F+SI+I ++AG G +LE+LY +YF+IQ+ A D+ E + T+ KLA +L+ + +LS V L+QI +N+AHLHH S KEAR KFK ISHAVVKLAT+VRG +A+ ++ HF+CPMV +G GDWLQ KL NPY+G Sbjct: 324 EHSVVYVETEPGRFELRNLTLGPILKNEAIVLDGLKPGEKVATSGNFLIDSQMQLAGKPSLIDPTRAVP----KFRNTPLEFESIKIARIAGPPGEKLEQLYESYFQIQQALAKDKLPTEQDVNTISKLAKELSSEDSLSENVYSHLEQIEKNSAHLHHQSTKEARQKFKFISHAVVKLATEVRGKSAERSFNHFFCPMVKQGEGDWLQVANKLSNPYYG 539
BLAST of mRNA_M-pyrifera_M_contig102350.501.1 vs. uniprot
Match: A0A517ZPT6_9PLAN (Cation efflux system protein CusB n=3 Tax=Symmachiella dynata TaxID=2527995 RepID=A0A517ZPT6_9PLAN) HSP 1 Score: 256 bits (653), Expect = 8.990e-78 Identity = 129/221 (58.37%), Postives = 164/221 (74.21%), Query Frame = 1 Query: 1 DHSVVYVETKPGRFELRNVTLGPMLGDTAVILDGVKPGEQVATSGNFLIDSQMQLSGKPSLIDPTKYQPDKKSKEKKG-PLKFDSIQIEKLAGGTGTQLEKLYAAYFKIQKQFAGDQPVKESEATTLQKLAAQLAQDANLSPTVRQELQQIAENAAHLHHLSLKEARLKFKPISHAVVKLATQVRGATAKEAYQHFYCPMVPEGGGDWLQPDLKLVNPYFG 660 +HSVVY+ET+PGRFELR V LGP+L D AVIL GV+ GEQVATSGNFLIDSQMQL+GKPSLIDPT+Y P K +++ PL F SI ++++ G +LE+LY AYF IQK FA D AT L +LAA++A+ +S R++LQ++A ++ HLHHLSL++ R KFK IS +V LAT RGA + E ++HF+CPMVP G GDWLQ D KL+NPYFG Sbjct: 436 EHSVVYIETEPGRFELRKVALGPILRDKAVILSGVEVGEQVATSGNFLIDSQMQLAGKPSLIDPTRYTPKKGTEQSDNHPLSFASIHVQRIPDEMGDKLEQLYRAYFAIQKSFANDNQPSAELATQLHQLAAEVAEAEEISKPARKQLQEVAADSEHLHHLSLEKGRKKFKAISAVMVTLATTYRGAKSTEPFRHFFCPMVPGGAGDWLQADDKLINPYFG 656 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102350.501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102350.501.1 >prot_M-pyrifera_M_contig102350.501.1 ID=prot_M-pyrifera_M_contig102350.501.1|Name=mRNA_M-pyrifera_M_contig102350.501.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=220bp DHSVVYVETKPGRFELRNVTLGPMLGDTAVILDGVKPGEQVATSGNFLIDback to top mRNA from alignment at M-pyrifera_M_contig102350:2..661- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102350.501.1 ID=mRNA_M-pyrifera_M_contig102350.501.1|Name=mRNA_M-pyrifera_M_contig102350.501.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=660bp|location=Sequence derived from alignment at M-pyrifera_M_contig102350:2..661- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102350:2..661- >mRNA_M-pyrifera_M_contig102350.501.1 ID=mRNA_M-pyrifera_M_contig102350.501.1|Name=mRNA_M-pyrifera_M_contig102350.501.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1320bp|location=Sequence derived from alignment at M-pyrifera_M_contig102350:2..661- (Macrocystis pyrifera P11B4 male)back to top |