mRNA_M-pyrifera_M_contig102336.498.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102336.498.1 vs. uniprot
Match: A0A6G0P693_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0P693_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 9.720e-19 Identity = 71/149 (47.65%), Postives = 94/149 (63.09%), Query Frame = 1 Query: 1 LDIHTAAWNGELRRVGELLDEDGGRVRAEDGTGFGDRNTPLHYAAYEGHLELVRLLLDRGAYVDAQNDSGCTXXXXXXXXXXXXXXXXXXXXXXXXXLREKSFGWTAADVAMTPSLTERLVTAGSLSPPPPPSSVHLRSLSGGRLRVDW 447 +DIHTA WNG VG L+++ + +D + +G+ N+PLHYAAY+GH + +L+ RGA V+A N SGCTXXXXXXXXXXXXXXXXXXX + E G T DV T ++TE L S PP P++ L +LS L++ W Sbjct: 98 VDIHTACWNGFEDVVGRLVEDGSELINQKDSSEYGNLNSPLHYAAYQGHARVCDILIKRGASVNAVNGSGCTXXXXXXXXXXXXXXXXXXXNDAELRVPESKHGLTPVDVCTTLAITE-LFRNLSGKPPSTPAAPTLETLSDTELKILW 245
BLAST of mRNA_M-pyrifera_M_contig102336.498.1 vs. uniprot
Match: A0A6G0LE40_9STRA (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6G0LE40_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 9.880e-19 Identity = 71/149 (47.65%), Postives = 94/149 (63.09%), Query Frame = 1 Query: 1 LDIHTAAWNGELRRVGELLDEDGGRVRAEDGTGFGDRNTPLHYAAYEGHLELVRLLLDRGAYVDAQNDSGCTXXXXXXXXXXXXXXXXXXXXXXXXXLREKSFGWTAADVAMTPSLTERLVTAGSLSPPPPPSSVHLRSLSGGRLRVDW 447 +DIHTA WNG VG L+++ + +D + +G+ N+PLHYAAY+GH + +L+ RGA V+A N SGCTXXXXXXXXXXXXXXXXXXX + E G T DV T ++TE L S PP P++ L +LS L++ W Sbjct: 98 VDIHTACWNGFEDVVGRLVEDGSELINQKDSSEYGNLNSPLHYAAYQGHARVCDILIKRGASVNAVNGSGCTXXXXXXXXXXXXXXXXXXXNDAELRVPESKHGLTPVDVCTTLAITE-LFRNLSGKPPSTPAAPTLETLSDTELKILW 245
BLAST of mRNA_M-pyrifera_M_contig102336.498.1 vs. uniprot
Match: W4FS07_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FS07_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 4.660e-18 Identity = 60/156 (38.46%), Postives = 76/156 (48.72%), Query Frame = 1 Query: 1 LDIHTAAWNGELRRVGELLDEDGGRVRAEDGTGFGDRNTPLHYAAYEGHLELVRLLL-DRGAYVDAQNDSGCTXXXXXXXXXXXXXXXXXXXXXXXXXLREKSFGWTAADVAMTPSLTERLVTAGSLSPPPPPSS-----VHLRSLSGGRLRVDWR 450 +DIHTA W+G L V L++ D V A+D T FGD NTPLHYAAY+GHL+L + LL D A VDA N GCT LRE ++A DVA + + LV S +P PS V S R+++ WR Sbjct: 129 VDIHTACWHGHLDVVTRLVEADREIVHAKDTTEFGDLNTPLHYAAYQGHLDLCQFLLHDARAKVDATNAMGCTPLFYASQQDRHHVVKFLLQGGANARLRESEHHFSAVDVACS---LDMLVVFRSHTPNDKPSVPLAPVVAATVPSTSRVQISWR 281
BLAST of mRNA_M-pyrifera_M_contig102336.498.1 vs. uniprot
Match: A0A7S4DGA5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGA5_HETAK) HSP 1 Score: 85.9 bits (211), Expect = 6.810e-18 Identity = 72/110 (65.45%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 4 DIHTAAWNGELRRVGELLDEDGGRVRAEDGTGFGDRNTPLHYAAYEGHLELVRLLLDRGAYVDAQNDSGCTXXXXXXXXXXXXXXXXXXXXXXXXXLREKSFGWTAADVA 333 DIHTA W G+ LL D GR D T FG TPLHYAAY GHLE+V LLL RGA V+A+ +GC XXXXXXXXXXXXXXXXXXXXXXXX +RE G TAADVA Sbjct: 84 DIHTACWEGDAAAARALLAADPGRAGEPDATEFGGAYTPLHYAAYRGHLEIVELLLARGAAVNARTATGCXXXXXXXXXXXXXXXXXXXXXXXXXSVRETERGLTAADVA 193
BLAST of mRNA_M-pyrifera_M_contig102336.498.1 vs. uniprot
Match: A0A329RI48_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RI48_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 8.140e-18 Identity = 73/150 (48.67%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 1 LDIHTAAWNGELRRVGELLDEDGGR-VRAEDGTGFGDRNTPLHYAAYEGHLELVRLLLDRGAYVDAQNDSGCTXXXXXXXXXXXXXXXXXXXXXXXXXLREKSFGWTAADVAMTPSLTERLVTAGSLSPPPPPSSVHLRSLSGGRLRVDW 447 +DIHTA WNG V E L EDG V D + +G++N+ LHYAAY+GH + +L+ RGA ++ +N SGCT XXXXXXXXXXXXXXXXXXX + E G T DV TP++TE L S PP P++ L LS L++ W Sbjct: 101 VDIHTACWNG-FEDVVERLVEDGSELVNERDSSEYGNQNSSLHYAAYQGHTSICDILIKRGASINGRNGSGCTPVFXXXXXXXXXXXXXXXXXXXELRISESKNGLTPVDVCTTPTITE-LFRNLSGKPPSIPAAPALEPLSDTELKILW 248
BLAST of mRNA_M-pyrifera_M_contig102336.498.1 vs. uniprot
Match: T0QFL9_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QFL9_SAPDV) HSP 1 Score: 88.2 bits (217), Expect = 1.040e-17 Identity = 51/152 (33.55%), Postives = 71/152 (46.71%), Query Frame = 1 Query: 1 LDIHTAAWNGELRRVGELLDEDGGRVRAEDGTGFGDRNTPLHYAAYEGHLELVRLLLDRGAYVDAQNDSGCTXXXXXXXXXXXXXXXXXXXXXXXXXLREKSFGWTAADVAMTPSLTERLVTAGSLSPPPPPSSVHLRSLSGGRLRVDWREA 456 +DIHTA W G++ V LL+ D V D T FGD NTPLHYAAY+GHL L RLL+++ A ++ N GCT LRE +A DV + ++ + P PPP V + ++ + + W A Sbjct: 108 VDIHTACWKGDVAVVERLLEHD--VVNDRDATEFGDMNTPLHYAAYQGHLTLCRLLIEKKAKINTTNAVGCTALFFASQQEHTSVVKYLLEQGADAKLRESEHLLSAVDVTSSMAVLDTFRAIAGDKPSPPPR-VDAKLITATSITITWTAA 256
BLAST of mRNA_M-pyrifera_M_contig102336.498.1 vs. uniprot
Match: W2Q1H7_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Q1H7_PHYPN) HSP 1 Score: 87.0 bits (214), Expect = 3.940e-17 Identity = 74/150 (49.33%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 1 LDIHTAAWNGELRRVGELLDEDGGR-VRAEDGTGFGDRNTPLHYAAYEGHLELVRLLLDRGAYVDAQNDSGCTXXXXXXXXXXXXXXXXXXXXXXXXXLREKSFGWTAADVAMTPSLTERLVTAGSLSPPPPPSSVHLRSLSGGRLRVDW 447 +DIHTA WNG V E L EDG V D + +G++N+PLHYAAY+GH + +L+ +GA ++ N SGCTXXXXXXXXXXXXXXXXXXXXXX + E G T DV TP++TE PP P++ L LS L++ W Sbjct: 101 VDIHTACWNG-FEDVVERLVEDGSELVNQRDSSEYGNQNSPLHYAAYQGHNSICDILIKQGASINGTNGSGCTXXXXXXXXXXXXXXXXXXXXXXELRIAETKNGLTPVDVCTTPAITELFRNLLG-KPPSTPAAPTLEPLSDTELKILW 248
BLAST of mRNA_M-pyrifera_M_contig102336.498.1 vs. uniprot
Match: A0A024TET5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TET5_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 5.690e-17 Identity = 54/151 (35.76%), Postives = 70/151 (46.36%), Query Frame = 1 Query: 1 LDIHTAAWNGELRRVGELLDEDGGRVRAEDGTGFGDRNTPLHYAAYEGHLELVRLLLDRGAYVDAQNDSGCTXXXXXXXXXXXXXXXXXXXXXXXXX-LREKSFGWTAADVAMTPSLTERLVTAGSLSPPPPPSSVHLRSLSGGRLRVDWR 450 +DIHTA WNG++ V L+ D V A+D T FGD NTPLHYAAY+GH +L L+D A VDA N GCT LRE ++A DVA + + + P PS+ + S + V WR Sbjct: 114 VDIHTACWNGDMDVVSRLVQADKDVVHAKDATEFGDLNTPLHYAAYQGHTDLCAYLMDH-AKVDAVNAIGCTPLFFASQQDRRDVVELLLRKGGANARLRETEHHFSAVDVASSTEMLQVFRNHRPNDKPAAPSAPAISSAGPTGVHVTWR 263
BLAST of mRNA_M-pyrifera_M_contig102336.498.1 vs. uniprot
Match: A0A0N7L4C5_PLAHL (FACT complex subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4C5_PLAHL) HSP 1 Score: 84.3 bits (207), Expect = 4.670e-16 Identity = 69/149 (46.31%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 1 LDIHTAAWNGELRRVGELLDEDGGRVRAEDGTGFGDRNTPLHYAAYEGHLELVRLLLDRGAYVDAQNDSGCTXXXXXXXXXXXXXXXXXXXXXXXXXLREKSFGWTAADVAMTPSLTERLVTAGSLSPPPPPSSVHLRSLSGGRLRVDW 447 +D+HTA W G V L+ + V A D + FG++N+PLHYAAY+GH + +L+ GA ++A N SGCTXXXXXXXXXXXXXXXXXXXXXX + E + G T DV TP++ PP P++ L+ LS ++V W Sbjct: 1184 IDVHTACWKGFEDVVSRLVCDGSELVNARDDSEFGNQNSPLHYAAYQGHTSICNILISSGASINATNGSGCTXXXXXXXXXXXXXXXXXXXXXXDLRIVENNNGLTPVDVCNTPAILTLFKNLPG-QPPSIPAAPTLKPLSESTIKVLW 1331
BLAST of mRNA_M-pyrifera_M_contig102336.498.1 vs. uniprot
Match: A0A7S1C330_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C330_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 6.510e-16 Identity = 37/69 (53.62%), Postives = 43/69 (62.32%), Query Frame = 1 Query: 4 DIHTAAWNGELRRVGELLDEDGGRVRAEDGTGFGDRNTPLHYAAYEGHLELVRLLLDRGAYVDAQNDSG 210 DIH AAW G+ + LD D A D T FG+ NTPLHYAAY GHLE +LL GA +DA ND+G Sbjct: 113 DIHIAAWKGDTEVLQTFLDADPSLATARDATDFGEGNTPLHYAAYNGHLEACEVLLANGADIDATNDAG 181 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102336.498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102336.498.1 >prot_M-pyrifera_M_contig102336.498.1 ID=prot_M-pyrifera_M_contig102336.498.1|Name=mRNA_M-pyrifera_M_contig102336.498.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp LDIHTAAWNGELRRVGELLDEDGGRVRAEDGTGFGDRNTPLHYAAYEGHLback to top mRNA from alignment at M-pyrifera_M_contig102336:138..593+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102336.498.1 ID=mRNA_M-pyrifera_M_contig102336.498.1|Name=mRNA_M-pyrifera_M_contig102336.498.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig102336:138..593+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102336:138..593+ >mRNA_M-pyrifera_M_contig102336.498.1 ID=mRNA_M-pyrifera_M_contig102336.498.1|Name=mRNA_M-pyrifera_M_contig102336.498.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig102336:138..593+ (Macrocystis pyrifera P11B4 male)back to top |