mRNA_M-pyrifera_M_contig102335.497.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102335.497.1 vs. uniprot
Match: D7FNV2_ECTSI (Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNV2_ECTSI) HSP 1 Score: 141 bits (356), Expect = 6.700e-40 Identity = 76/136 (55.88%), Postives = 101/136 (74.26%), Query Frame = 1 Query: 1 FRTITASYYRGAHGIIVVFDLSDEESFVSVSQWLAEIDKYASESVVKILVGNKKDLEEKRAVATEDARAFAEEHGMSYLETSAKQDENIGEAFKLISREIKKHQMDTEHKAAPAGGDVSIDRGADMGEAGGGGGCC 408 FRTIT+SYYRGAHGIIVV+D++D+ESF +V QWL EID+YA E+V K+LVGNK DLE KRAV TE+A+AFA+ G+ +LETSAK N+ +AF +++ +IK +M ++ AP GG + + AG GGGCC Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKS-RMKSQPTGAPRGG-TRLTASTQVSGAGSGGGCC 203
BLAST of mRNA_M-pyrifera_M_contig102335.497.1 vs. uniprot
Match: A0A812YU43_9DINO (YPTC1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YU43_9DINO) HSP 1 Score: 143 bits (360), Expect = 2.040e-39 Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 1 Query: 1 FRTITASYYRGAHGIIVVFDLSDEESFVSVSQWLAEIDKYASESVVKILVGNKKDLEEKRAVATEDARAFAEEHGMSYLETSAKQDENIGEAFKLISREIKKHQMDTEHKAAPAGGDVSIDRGADMGEAGGGGGCC 408 FRTIT+SYYRGAHGIIVV+D +D+ESF +V +WL EIDKYA+E+V K+LVGNK DLE KR V TE+A+AFAEE G+ +LETSAK N+ E+F ++REI+K A G +I G ++G GG GGCC Sbjct: 165 FRTITSSYYRGAHGIIVVYDTTDKESFDNVVEWLNEIDKYATENVNKLLVGNKCDLESKRQVDTEEAKAFAEERGIPFLETSAKNSLNVEESFLTMAREIQKRMQS--QAATSRGKTDTITPGKEIGAGGGSGGCC 298
BLAST of mRNA_M-pyrifera_M_contig102335.497.1 vs. uniprot
Match: A0A5A8DA02_CAFRO (Uncharacterized protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8DA02_CAFRO) HSP 1 Score: 138 bits (348), Expect = 1.080e-38 Identity = 75/140 (53.57%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 1 FRTITASYYRGAHGIIVVFDLSDEESFVSVSQWLAEIDKYASESVVKILVGNKKDLEEKRAVATEDARAFAEEHGMSYLETSAKQDENIGEAFKLISREIKKHQMDTEHKAAPAGGDVSIDRGADM----GEAGGGGGCC 408 FR I +SYYRGAHGIIVV+D++D E+F +V WL EI+K+ +E V +LVGNK DLE+KRAV ++A+AFA+EHGM +LETSAK DE + EAF ++R+IK+ K A AGGD G + G + GGGGCC Sbjct: 71 FRVIASSYYRGAHGIIVVYDITDAETFANVKTWLGEIEKHGTEGVKTLLVGNKSDLEDKRAVPYDEAKAFADEHGMPFLETSAKDDEGVEEAFMEMARQIKE-------KLADAGGDGDAGEGVVIDGKRGTSSGGGGCC 203
BLAST of mRNA_M-pyrifera_M_contig102335.497.1 vs. uniprot
Match: A0A7S1TRZ4_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRZ4_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.450e-38 Identity = 75/136 (55.15%), Postives = 101/136 (74.26%), Query Frame = 1 Query: 1 FRTITASYYRGAHGIIVVFDLSDEESFVSVSQWLAEIDKYASESVVKILVGNKKDLEEKRAVATEDARAFAEEHGMSYLETSAKQDENIGEAFKLISREIKKHQMDTEHKAAPAGGDVSIDRGADMGEAGGGGGCC 408 FRTIT+SYYRGAHGIIVV+D++D ESF +V QWL EID+YASE+V K+LVGNK DLE+KR V TE A+ FAE G+ ++ETSAK N+ EAF +++ +IK+ +M T+ + A A G+ + G +G +GG CC Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDMESFNNVKQWLHEIDRYASENVNKLLVGNKADLEDKRVVTTEAAQEFAESLGIEFIETSAKDRLNVEEAFTMMASQIKR-RMKTQPQPAGARGNTKLSPGQQVGSSGG---CC 201
BLAST of mRNA_M-pyrifera_M_contig102335.497.1 vs. uniprot
Match: A0A835YQS3_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS3_9STRA) HSP 1 Score: 137 bits (345), Expect = 3.170e-38 Identity = 77/140 (55.00%), Postives = 99/140 (70.71%), Query Frame = 1 Query: 1 FRTITASYYRGAHGIIVVFDLSDEESFVSVSQWLAEIDKYASESVVKILVGNKKDLEEKRAVATEDARAFAEEHGMSYLETSAKQDENIGEAFKLISREIKKHQMDTEHKAAPAGG---DVSIDRGADMGEAGGGG-GCC 408 FRTITASYYRGAHGIIVV+D++D ESF +V QWL EI++YA E+V K+LVGNK DLE KRAV TE+ + FA+ G+ +LETSAK +N+ +AF ++S++IK K APAGG + G +G G GG GCC Sbjct: 70 FRTITASYYRGAHGIIVVYDVTDRESFNNVKQWLTEIERYACENVNKLLVGNKSDLEAKRAVTTEEGKEFADSIGIEFLETSAKNADNVEKAFLMMSQQIKGRM-----KTAPAGGAKGGTRLTAGEQVGGGGAGGSGCC 204
BLAST of mRNA_M-pyrifera_M_contig102335.497.1 vs. uniprot
Match: A0A3R7BWG4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7BWG4_9STRA) HSP 1 Score: 133 bits (334), Expect = 6.560e-37 Identity = 72/136 (52.94%), Postives = 97/136 (71.32%), Query Frame = 1 Query: 1 FRTITASYYRGAHGIIVVFDLSDEESFVSVSQWLAEIDKYASESVVKILVGNKKDLEEKRAVATEDARAFAEEHGMSYLETSAKQDENIGEAFKLISREIKKHQMDTEHKAAPAGGDVSIDRGADMGEAGGGGGCC 408 FRTIT+SYYRGAHGIIVV+D++D+ESF +V QWL EID+YA E+V K+LVGNK DL KR V+T+ A+ FAE G+ +LETSAK N+ +AF +++ +IKK + + PA +S+ G D+G GG CC Sbjct: 46 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVVSKPA---ISLGPGKDVGSKSGG--CC 176
BLAST of mRNA_M-pyrifera_M_contig102335.497.1 vs. uniprot
Match: A0A0D9WBT6_9ORYZ (Uncharacterized protein n=3 Tax=Oryzeae TaxID=147380 RepID=A0A0D9WBT6_9ORYZ) HSP 1 Score: 132 bits (333), Expect = 2.560e-36 Identity = 67/102 (65.69%), Postives = 85/102 (83.33%), Query Frame = 1 Query: 1 FRTITASYYRGAHGIIVVFDLSDEESFVSVSQWLAEIDKYASESVVKILVGNKKDLEEKRAVATEDARAFAEEHGMSYLETSAKQDENIGEAFKLISREIKK 306 FRTIT+SYYRGAHGII+V+D++D ESF +V QWL+EID+YAS+SV K+LVGNK DL E + V TE+A+AFAE G+S+LETSAK+ N+ EAF +S EIKK Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDLVESKVVDTEEAKAFAESLGISFLETSAKESINVEEAFLTMSSEIKK 171
BLAST of mRNA_M-pyrifera_M_contig102335.497.1 vs. uniprot
Match: D8RP83_SELML (Rab family GTPase n=9 Tax=Embryophyta TaxID=3193 RepID=D8RP83_SELML) HSP 1 Score: 130 bits (328), Expect = 1.100e-35 Identity = 70/136 (51.47%), Postives = 96/136 (70.59%), Query Frame = 1 Query: 1 FRTITASYYRGAHGIIVVFDLSDEESFVSVSQWLAEIDKYASESVVKILVGNKKDLEEKRAVATEDARAFAEEHGMSYLETSAKQDENIGEAFKLISREIKKHQMDTEHKAAPAGGDVSIDRGADMGEAGGGGGCC 408 FRTIT+SYYRGAHGIIVV+D++D+ESF +V QWL EID+YASE+V K+LVGNK DL K+ V T+ A+AFA+E G+ +LETSAK N+ +AF ++ EIK + +VS+++G + + GG CC Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKADLTAKKVVDTQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNSNKPNNVSLNKGQPLNQKGG---CC 202
BLAST of mRNA_M-pyrifera_M_contig102335.497.1 vs. uniprot
Match: A0A067C976_SAPPC (Ras-like GTP-binding protein YPT1 n=11 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C976_SAPPC) HSP 1 Score: 130 bits (327), Expect = 1.480e-35 Identity = 70/136 (51.47%), Postives = 98/136 (72.06%), Query Frame = 1 Query: 1 FRTITASYYRGAHGIIVVFDLSDEESFVSVSQWLAEIDKYASESVVKILVGNKKDLEEKRAVATEDARAFAEEHGMSYLETSAKQDENIGEAFKLISREIKKHQMDTEHKAAPAGGDVSIDRGADMGEAGGGGGCC 408 FRTIT+SYYRGAHGIIVV+D++D+ESF +V QWL EID+YA E+V K+LVGNK DL KR V+T+ A+ FA+ G+ +LETSAK N+ +AF +++ +IKK ++ PA +S+ G ++ +G GGCC Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKDFADSLGIEFLETSAKNAANVEKAFMMMAAQIKKRMASAPMQSKPA---ISLQPGQNV--SGKSGGCC 200
BLAST of mRNA_M-pyrifera_M_contig102335.497.1 vs. uniprot
Match: K3W769_GLOUD (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=K3W769_GLOUD) HSP 1 Score: 130 bits (327), Expect = 1.520e-35 Identity = 70/136 (51.47%), Postives = 97/136 (71.32%), Query Frame = 1 Query: 1 FRTITASYYRGAHGIIVVFDLSDEESFVSVSQWLAEIDKYASESVVKILVGNKKDLEEKRAVATEDARAFAEEHGMSYLETSAKQDENIGEAFKLISREIKKHQMDTEHKAAPAGGDVSIDRGADMGEAGGGGGCC 408 FRTIT+SYYRGAHGIIVV+D++D+ESF +V QWL EID+YA E+V K+LVGNK DL KR V+TE A+ FAE G+ +LETSAK N+ +AF +++ +IKK + P + +++G ++ + GGG CC Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTEAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPTAPKPT---LKLNQGTNV-QQNGGGKCC 201 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102335.497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102335.497.1 >prot_M-pyrifera_M_contig102335.497.1 ID=prot_M-pyrifera_M_contig102335.497.1|Name=mRNA_M-pyrifera_M_contig102335.497.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp FRTITASYYRGAHGIIVVFDLSDEESFVSVSQWLAEIDKYASESVVKILVback to top mRNA from alignment at M-pyrifera_M_contig102335:71..481- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102335.497.1 ID=mRNA_M-pyrifera_M_contig102335.497.1|Name=mRNA_M-pyrifera_M_contig102335.497.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=411bp|location=Sequence derived from alignment at M-pyrifera_M_contig102335:71..481- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102335:71..481- >mRNA_M-pyrifera_M_contig102335.497.1 ID=mRNA_M-pyrifera_M_contig102335.497.1|Name=mRNA_M-pyrifera_M_contig102335.497.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig102335:71..481- (Macrocystis pyrifera P11B4 male)back to top |