mRNA_M-pyrifera_M_contig102325.494.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102325.494.1 vs. uniprot
Match: UPI001081C5E7 (hypothetical protein n=1 Tax=Candidatus Chloroploca sp. M50-1 TaxID=2528176 RepID=UPI001081C5E7) HSP 1 Score: 101 bits (251), Expect = 2.850e-21 Identity = 80/212 (37.74%), Postives = 108/212 (50.94%), Query Frame = 1 Query: 1 NWTAGAEVRVFAVDDNRAEAREQAVQVLARAVSTDSSFAGVET------SLGVTVVDDDVAGVVVAPLQVSVSEAGTTATFSVRLSSMPWSSVEVR-ATGGSQVSAAPATLVFAAANWAEAQQVTVAAVDDELDEQDVHEGVVQLTTESEDDGYAGLL-----LPSVGASVTDDDSAAVTLSSGEVSVVEGGQ-VSYTVALTAAPTGPVAVT 597 NW V+V AVDD EA Q+ S D ++ ++ V + D+D AGV + P V V+E G +A++SVRL S P + V + A +QVS T+ F NW AQ V V AVDD +DE DVH + TT S D Y LP+V +TD+D+A V ++ V V EGG SY+V L + PT PV +T Sbjct: 1333 NWNTAQSVQVTAVDDAIDEADVHTSQITHTTASADPNYNQATAPFRPLPTVTVRITDNDTAGVAITPTTVEVAEGGDSASYSVRLLSEPTAPVTITLAVDAAQVSVNRTTVSFTPQNWNTAQSVQVTAVDDAIDEADVHTSQITHTTASADPNYNQATAPFRPLPTVTVRITDNDTAGVAITPTTVEVAEGGDSASYSVRLLSEPTAPVTIT 1544
BLAST of mRNA_M-pyrifera_M_contig102325.494.1 vs. uniprot
Match: UPI001AE4AFB8 (hypothetical protein n=1 Tax=Candidatus Chloroploca sp. M50-1 TaxID=2528176 RepID=UPI001AE4AFB8) HSP 1 Score: 100 bits (249), Expect = 5.260e-21 Identity = 79/212 (37.26%), Postives = 109/212 (51.42%), Query Frame = 1 Query: 1 NWTAGAEVRVFAVDDNRAEAREQAVQVLARAVSTDSSFAGVET------SLGVTVVDDDVAGVVVAPLQVSVSEAGTTATFSVRLSSMPWSSVEVR-ATGGSQVSAAPATLVFAAANWAEAQQVTVAAVDDELDEQDVHEGVVQLTTESEDDGYAGLL-----LPSVGASVTDDDSAAVTLSSGEVSVVEGGQ-VSYTVALTAAPTGPVAVT 597 NW V+V AVDD EA Q+ S+D ++ ++ V + D+D AGV + P V V+E G + +SVRL S P + V + A +QVS ++L F NW +AQ V V AVDD +DE D+H + TT S D Y LP+V +TD+D+A VT++ V V EGG SY V L + PT PV +T Sbjct: 46 NWNDAQSVQVTAVDDAIDEADLHTSQITHTTASSDPNYNQATAPFRPLPTVTVRITDNDTAGVAITPTTVEVTEGGASTNYSVRLLSEPTAPVSITLAFDAAQVSVNRSSLTFTPQNWNDAQSVQVTAVDDAIDEADLHLSFITHTTASADPNYNQATARFTPLPTVTVRITDNDTAGVTITPTTVEVAEGGDSASYAVRLLSQPTAPVTIT 257
BLAST of mRNA_M-pyrifera_M_contig102325.494.1 vs. uniprot
Match: A0A0G1ZKZ5_9BACT (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Candidatus Uhrbacteria bacterium GW2011_GWD2_52_7 TaxID=1618989 RepID=A0A0G1ZKZ5_9BACT) HSP 1 Score: 97.4 bits (241), Expect = 5.880e-20 Identity = 74/200 (37.00%), Postives = 115/200 (57.50%), Query Frame = 1 Query: 1 NWTAGAEVRVFAVDDNRAEAREQAVQVLARAVSTDSSFAGVETS-LGVTVVDDDVAGVVVAPLQVS--VSEAGTTATFSVRLSSMPWSSVEVRATGGSQVSAAPATLVFAAANWAEAQQVTVAAVDDELDEQDVHEGVVQLTTESEDDGYAGLLLPSVGASVTDDDSAAVTLSSGEVSVVE-GGQVSYTVALTAAPTGPV 588 NW+ V V V+D+ A+ VL AVS+D +++GV S + +T VDDD G ++ S V E+G T ++++ L++ P + V V T + +S +P +L F +ANWA Q VTV+A DD++D Q H + T+ S D GY GL + + SV+D+D+A VT+ + + E GG +YT+ LT+ PT V Sbjct: 769 NWSVPQTVTVTGVNDDVADGNIIYSAVLDAAVSSDVNYSGVNASDVSITNVDDDTVGAIITQSSGSTVVLESGGTDSYTMVLTAQPLADVVVAITAENPLSTSPTSLTFTSANWAVEQTVTVSAADDDVD-QGTHTHALSHTSASADPGYEGLAISGITVSVSDNDTAGVTVGALSGNTTEAGGTGTYTLVLTSEPTADV 967
BLAST of mRNA_M-pyrifera_M_contig102325.494.1 vs. uniprot
Match: A0A7C6TJA3_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C6TJA3_9CHLR) HSP 1 Score: 95.5 bits (236), Expect = 2.650e-19 Identity = 75/192 (39.06%), Postives = 104/192 (54.17%), Query Frame = 1 Query: 37 VDDNRAEAREQAVQVLARAVSTDSSFAGVE-TSLGVTVVDDDVAGVVVAPLQVSVSEAGTTATFSVRLSSMPWSSVEVRATGGSQVSAAPATLVFAAANWAEAQQVTVAAVDDELDEQDVHEGVVQLTTESEDDGYAGLLLPSVGASVTDDDSAAVTL--SSGEVSVVEGGQV-SYTVALTAAPTGPVAVTV 600 VDD+ + + RA S D ++ G+ T + V++ DDDVAGV VAP V V E G T T+ V L S P + V +R + Q P L FA ++W + QQVTV A DD ++E D HE V++ + ES D Y GL + +V A + D V + S G V EGG SYT+AL + P V +T+ Sbjct: 217 VDDDAVAMGPRTGVIAYRAESDDPTYDGLAITDVHVSLSDDDVAGVTVAPTTVHVEEGGATDTYGVTLESQPLADVTIRVSSDGQTRTTPTLLSFAPSDWNQTQQVTVTAEDDLVEEGD-HESVIEHSVESADPAYDGLAVQAVTAVIADRRPPGVRIRESVGSTRVTEGGPSDSYTIALRSMPLSNVVITI 407
BLAST of mRNA_M-pyrifera_M_contig102325.494.1 vs. uniprot
Match: UPI0016858AE8 (Ig-like domain-containing protein n=1 Tax=Planktothrix sp. FACHB-1365 TaxID=2692855 RepID=UPI0016858AE8) HSP 1 Score: 93.6 bits (231), Expect = 1.340e-18 Identity = 68/200 (34.00%), Postives = 113/200 (56.50%), Query Frame = 1 Query: 1 NWTAGAEVRVFAVDDNRAEAREQAVQVLARAVSTDSSFAGVETS-LGVTVVDDDVAGVVVAPLQVSVSEAGTTATFSVRLSSMPWSSVEVRATGGSQV--SAAPATLVFAAANWAEAQQVTVAAVDDELDEQDVHEGVVQLTTESEDDGYAGLLLPSVGASVTDDDSAAVTLSSGEVSVVE-GGQVSYTVALTAAPTGPV 588 NW V V VDDN + + V A A STD+++ G++++ +GVT +D+DVAG ++P+ + +EAG TATF+++L + P + V + + + + APA++ F + NW + Q VTV VDD + + + + +V S D Y G+ +G D+D A VT+S+ + E GG ++TV L++ PT V Sbjct: 1148 NWNIAQSVTVTGVDDNSIDGNKAYKIVTAAATSTDTNYNGLDSNDIGVTNLDNDVAGFTISPISGNTTEAGGTATFTLQLKTQPTADVTLPLSSDNTAEGTVAPASVTFNSTNWNQPQTVTVTGVDDSIADGNQNYNIVTGAATSTDTNYNGVDPNDIGIDNIDNDVAGVTISAISGNTTEAGGTATFTVQLSSQPTADV 1347
BLAST of mRNA_M-pyrifera_M_contig102325.494.1 vs. uniprot
Match: UPI001746EBD2 (Ig-like domain-containing protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI001746EBD2) HSP 1 Score: 92.8 bits (229), Expect = 2.480e-18 Identity = 72/204 (35.29%), Postives = 114/204 (55.88%), Query Frame = 1 Query: 1 NWTAGAEVRVFAVDDNRAEAREQAVQVLARAVSTDSSFAGVETS-LGVTVVDDDVAGVVVAPLQVSVSEAGTTATFSVRLSSMPWSSVEVRATGGSQVSAAPATLVFAAANWAEAQQVTVAAVDDELDEQDVHEGVVQLTTESEDDGYAGLLLPSVGASVTDDDSAAVTLS--SGEVSVVEGGQV-SYTVALTAAPTGPVAVTV 600 NW +V V ++D+ + ++ A S+D++++ + + V VDDD AG+ +APL SV+E T ++S+ L+S P S V V+ + GSQ+ TL+F NW + Q VTV AV+D++ E H + ES D Y L ++ A++TD+DSA V ++ SG ++ E G SYTV L++ PT V VT+ Sbjct: 2262 NWNLVQKVTVTGLNDDLDDGNIT-YTIVTSATSSDTNYSDINIDDVVVENVDDDTAGITIAPLSTSVTEGSATDSYSIVLNSQPTSDVIVKISTGSQIGTDLTTLIFTPTNWNQLQTVTVTAVNDDVAE-GAHTDTITHAIESTDAKYNNLTDATITANITDNDSAGVIITPLSGSTNLTEAGTTDSYTVVLSSRPTANVTVTI 2463
BLAST of mRNA_M-pyrifera_M_contig102325.494.1 vs. uniprot
Match: A7HEH9_ANADF (ZU5 domain-containing protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) TaxID=404589 RepID=A7HEH9_ANADF) HSP 1 Score: 90.9 bits (224), Expect = 1.150e-17 Identity = 81/209 (38.76%), Postives = 113/209 (54.07%), Query Frame = 1 Query: 1 NWTAGAEVRVFAVDDNRAEAREQAVQVLARAVSTDSSFAGVE---TSLGVTVVDDDVAGVVV-APLQVSVSEAGTTATFSVRLSSMPWS--SVEVRATGGSQVSAAPATLVFAAANWAEAQQVTVAAVDDELDEQD-VHEGVVQLTTESEDDGYAGLLLPSVGASVTDDDSAAVTLS--SGEVSVVEGGQVSYTVALTAAPTGPVAVTV 600 NW V V DD A+ + + + A S D +AG L T DDDVAG+ V AP S SEAGT+ATF+V L+S P S +V V ++ ++ + APA+LVF A+NW+ AQ VTV VDD +D+ D ++ + T S D GYAG + + DDD+A + S +G V+ GG S+ + L + PT V V V Sbjct: 833 NWNVPQTVTVTGADDFVADGDQTYLVAIGPATSADPGYAGRPGDPADLTFTNTDDDVAGIAVGAPSAPSTSEAGTSATFTVALTSQPTSDVTVPVSSSDATEGTIAPASLVFTASNWSVAQTVTVTGVDDAVDDGDQTYQAAIGPAT-SADAGYAGRDPADLTFTNIDDDAAGLVASPSTGLVTTEAGGTASFQLTLASQPTADVVVAV 1040
BLAST of mRNA_M-pyrifera_M_contig102325.494.1 vs. uniprot
Match: UPI00187ED8C2 (Ig-like domain-containing protein n=1 Tax=Planktothrix mougeotii TaxID=54306 RepID=UPI00187ED8C2) HSP 1 Score: 89.4 bits (220), Expect = 3.860e-17 Identity = 65/200 (32.50%), Postives = 108/200 (54.00%), Query Frame = 1 Query: 1 NWTAGAEVRVFAVDDNRAEAREQAVQVLARAVSTDSSFAG-VETSLGVTVVDDDVAGVVVAPLQVSVSEAGTTATFSVRLSSMPWSSVEVRATGGSQVSAA--PATLVFAAANWAEAQQVTVAAVDDELDEQDVHEGVVQLTTESEDDGYAGLLLPSVGASVTDDDSAAVTLSSGEVSVVE-GGQVSYTVALTAAPTGPV 588 NW + V VDDN + + V A A STD++++G V +GVT +D+D+AG ++P+ + +EAG T+TF+++L + P + V + + + PA++ F + NW + Q VTV VDD + + + +V S D Y G+ +G D+D A VT+S+ + E GG ++TV L++ PT V Sbjct: 1146 NWNIAQNITVTGVDDNSIDGNKAYKIVTADATSTDTNYSGLVSNDIGVTNLDNDIAGFTISPISSNTTEAGGTSTFTIQLKTQPTADVTLPLSSDNTAEGTVLPASVTFNSTNWNQPQTVTVNGVDDSIADGNQTYNIVTGVATSTDTNYNGVDPNDIGIDNIDNDVAGVTISAISGNTTEAGGTATFTVQLSSQPTADV 1345
BLAST of mRNA_M-pyrifera_M_contig102325.494.1 vs. uniprot
Match: A0A2M7A381_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium CG07_land_8_20_14_0_80_59_28 TaxID=1973917 RepID=A0A2M7A381_9BACT) HSP 1 Score: 89.0 bits (219), Expect = 5.300e-17 Identity = 72/198 (36.36%), Postives = 109/198 (55.05%), Query Frame = 1 Query: 1 NWTAGAEVRVFAVDDNRAEAREQAVQVLARAVSTDSSFAGVETS-LGVTVVDDDVAGVVVAPLQ-VSVSEAGTTATFSVRLSSMPWSSVEVRAT--GGSQVSAAPATLVFAAANWAEAQQVTVAAVDDELDEQDVHEGVVQLTTESEDDGYAGLLLPSVGASVTDDDSAAVTLSSG-EVSVVEGGQVSYTVALTAAPT 579 NW+ V V VDD + V A A S D+++ G + + T D+D AG+ V P ++ +EAG TATF+V+L+S P V + + ++ +A+PA+L F AANW+ AQ VTV VDD LD+ D+ + S D Y GL V A+ TD+D+A+V+ ++ + SV E G ++ T L+ A T Sbjct: 2049 NWSTAQTVTVTGVDDWVDDGDIGYTVVTAAATSADANYNGANAADVSATNTDNDGAGITVNPTSGLTTTEAGGTATFTVKLNSQPTGDVTIALSRSDATEGAASPASLTFTAANWSTAQTVTVTGVDDNLDDGDIAYTIATAAATSADAKYNGLNAADVSATNTDNDAASVSFAAAAQSSVQESGTMTVTAQLSVAST 2246
BLAST of mRNA_M-pyrifera_M_contig102325.494.1 vs. uniprot
Match: A0A7C4NVT0_9BACT (Tandem-95 repeat protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7C4NVT0_9BACT) HSP 1 Score: 88.6 bits (218), Expect = 7.330e-17 Identity = 68/198 (34.34%), Postives = 105/198 (53.03%), Query Frame = 1 Query: 4 WTAGAEVRVFAVDDNRAEAREQAVQVLARAVSTDSSFAGVETS-LGVTVVDDDVAGVVVAPLQ-VSVSEAGTTATFSVRLSSMPWSSVEVRATGGSQV--SAAPATLVFAAANWAEAQQVTVAAVDDELDEQDVHEGVVQLTTESEDDGYAGLLLPSVGASVTDDDSAAVTLS--SGEVSVVEGGQVSYTVALTAAPT 579 W + V V+D+ + V + A STD+ + G+ + VT +DDDVAG + P + +EAG TATF+VRL++ P ++V + T + S +P TL F +NW+ AQ VT+ VDD++D+ +V +V S D Y+GL V + D+D+A T+S SG + GG +T+ L PT Sbjct: 1733 WNVAQTITVTGVNDDVDDDNVGYTIVTSAASSTDTKYNGLNPDDVSVTNIDDDVAGFTITPTSGLQTTEAGGTATFTVRLNTKPTANVTITLTSSNPAEGSVSPTTLTFTTSNWSTAQPVTITGVDDDVDDDNVVYTIVTNPASSTDGKYSGLNPSDVSVTNIDNDTAGFTVSPTSGLTTTEAGGTAQFTIKLNTRPT 1930 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102325.494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102325.494.1 >prot_M-pyrifera_M_contig102325.494.1 ID=prot_M-pyrifera_M_contig102325.494.1|Name=mRNA_M-pyrifera_M_contig102325.494.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp NWTAGAEVRVFAVDDNRAEAREQAVQVLARAVSTDSSFAGVETSLGVTVVback to top mRNA from alignment at M-pyrifera_M_contig102325:5..604+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102325.494.1 ID=mRNA_M-pyrifera_M_contig102325.494.1|Name=mRNA_M-pyrifera_M_contig102325.494.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig102325:5..604+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102325:5..604+ >mRNA_M-pyrifera_M_contig102325.494.1 ID=mRNA_M-pyrifera_M_contig102325.494.1|Name=mRNA_M-pyrifera_M_contig102325.494.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig102325:5..604+ (Macrocystis pyrifera P11B4 male)back to top |