mRNA_M-pyrifera_M_contig102307.490.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102307.490.1 vs. uniprot
Match: A0A453EZX4_AEGTS (Helicase ATP-binding domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453EZX4_AEGTS) HSP 1 Score: 132 bits (333), Expect = 4.100e-37 Identity = 64/125 (51.20%), Postives = 90/125 (72.00%), Query Frame = 1 Query: 1 PKMAVLGSRAQLCIHDDVSKIRGNAQHHACRKLVSKQKCKFHKRVQDY-KSNSDFTDAVLDIEELAGLGKSKGVCPYYLTRELQDNAELVLIPYNYLIDPQTRQSLH-VDLEGSVLIFDEAHNMV 369 PKMAVLGSR Q+CIH++VSK+RG AQ++ C L K+ C+ + V DY K+N++ DIE+L +G++KG CPYY++REL + +++ PYNYLIDP R+SL + +VLIFDEAHN+V Sbjct: 42 PKMAVLGSREQMCIHEEVSKLRGKAQNNGCHYLCKKRLCRHNNIVTDYMKNNTELGSEPFDIEDLVNIGRTKGPCPYYISRELSKSVDILFAPYNYLIDPGNRRSLTGISWNNAVLIFDEAHNLV 166
BLAST of mRNA_M-pyrifera_M_contig102307.490.1 vs. uniprot
Match: A0A7S2X2K7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2X2K7_9CHLO) HSP 1 Score: 141 bits (355), Expect = 1.480e-36 Identity = 71/124 (57.26%), Postives = 94/124 (75.81%), Query Frame = 1 Query: 1 PKMAVLGSRAQLCIHDDVSKIRGNAQHHACRKLVSKQKCKFHKRVQDYK-SNSDFTDAVLDIEELAGLGKSKGVCPYYLTRELQDNAELVLIPYNYLIDPQTRQSL-HVDLEGSVLIFDEAHNM 366 PK VLGSR Q+CIH VSKI+GNAQ+ ACR LV+KQ CK H VQ++ +N +LDIE+L LG+S G CP+Y++RELQ +AELV++PYNYL+DP+ R+S+ ++D VLIFDEAHN+ Sbjct: 118 PKTCVLGSRQQMCIHPTVSKIQGNAQNQACRALVAKQACKAHNSVQEWLLANKQAATQLLDIEDLVRLGRSGGGCPFYISRELQADAELVILPYNYLVDPKIRKSMTNLDWSKCVLIFDEAHNL 241
BLAST of mRNA_M-pyrifera_M_contig102307.490.1 vs. uniprot
Match: UPI001B7E4DB3 (regulator of telomere elongation helicase 1 homolog isoform X1 n=2 Tax=Juglans microcarpa x Juglans regia TaxID=2249226 RepID=UPI001B7E4DB3) HSP 1 Score: 137 bits (346), Expect = 1.720e-35 Identity = 67/123 (54.47%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 1 PKMAVLGSRAQLCIHDDVSKIRGNAQHHACRKLVSKQKCKFHKRVQDY-KSNSDFTDAVLDIEELAGLGKSKGVCPYYLTRELQDNAELVLIPYNYLIDPQTRQSLHVDLEGSVLIFDEAHNM 366 PKM VLGSR QLCIHD+VS +RG Q ++C L K+KC H RV +Y K N D +DIE+L +G+ G CPYY++REL A++ PYNYLIDP R+SL VD S+LIFDEAHN+ Sbjct: 121 PKMVVLGSREQLCIHDEVSSLRGKTQTNSCHSLCRKRKCSHHSRVAEYMKKNPHLGDEPIDIEDLVNVGRRFGPCPYYVSRELHRIADIFFAPYNYLIDPGNRKSLKVDWNNSILIFDEAHNL 243
BLAST of mRNA_M-pyrifera_M_contig102307.490.1 vs. uniprot
Match: A0A6P8HMK1_ACTTE (Regulator of telomere elongation helicase 1 homolog n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HMK1_ACTTE) HSP 1 Score: 137 bits (345), Expect = 4.030e-35 Identity = 62/123 (50.41%), Postives = 93/123 (75.61%), Query Frame = 1 Query: 1 PKMAVLGSRAQLCIHDDVSKIRGN-AQHHACRKLVSKQKCKFHKRVQDYKSNSDFTDAVLDIEELAGLGKSKGVCPYYLTRELQDNAELVLIPYNYLIDPQTRQSLHVDLEGSVLIFDEAHNM 366 P+++++GSR QLCIH DV K N A+ H CR V+ + C F+ ++ KSN DFT ++LDIE+L LG+ VCPYY+ REL+ NAE+V +PYNY++DP++R++ ++D+ GS++IFDEAHN+ Sbjct: 139 PRVSIIGSREQLCIHPDVLKQENNSAKVHMCRAKVTARTCPFYNNLEVNKSNPDFTSSILDIEDLVKLGQKHKVCPYYMARELKTNAEIVFMPYNYMLDPKSRKAHNLDISGSIVIFDEAHNV 261
BLAST of mRNA_M-pyrifera_M_contig102307.490.1 vs. uniprot
Match: A0A2I4DXZ7_JUGRE (regulator of telomere elongation helicase 1 homolog isoform X1 n=11 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4DXZ7_JUGRE) HSP 1 Score: 137 bits (344), Expect = 5.490e-35 Identity = 67/123 (54.47%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 1 PKMAVLGSRAQLCIHDDVSKIRGNAQHHACRKLVSKQKCKFHKRVQDY-KSNSDFTDAVLDIEELAGLGKSKGVCPYYLTRELQDNAELVLIPYNYLIDPQTRQSLHVDLEGSVLIFDEAHNM 366 PKM VLGSR QLCIHD+VS +RG Q ++C L K+KC H RV +Y K N D +DIE+L +G+ G CPYY++REL A++ PYNYLIDP R+SL VD S+LIFDEAHN+ Sbjct: 121 PKMVVLGSREQLCIHDEVSSLRGKTQTNSCHSLCRKRKCGHHSRVAEYMKKNPHLGDEPIDIEDLVNVGRRFGPCPYYVSRELHRIADIFFAPYNYLIDPGNRKSLKVDWNNSILIFDEAHNL 243
BLAST of mRNA_M-pyrifera_M_contig102307.490.1 vs. uniprot
Match: A0A835IFC1_9MAGN (Helicase ATP-binding domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835IFC1_9MAGN) HSP 1 Score: 136 bits (343), Expect = 7.540e-35 Identity = 66/123 (53.66%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 1 PKMAVLGSRAQLCIHDDVSKIRGNAQHHACRKLVSKQKCKFHKRVQDY-KSNSDFTDAVLDIEELAGLGKSKGVCPYYLTRELQDNAELVLIPYNYLIDPQTRQSLHVDLEGSVLIFDEAHNM 366 PKM V+GSR QLCIHDDV +RG AQ +AC + K+KC H V + K+NS+ D +DIE+L +G+S+G CPYYL+REL +++ PYNYLID R+SL++ E SVLIFDEAHN+ Sbjct: 103 PKMVVIGSREQLCIHDDVKNLRGRAQTNACHFVCKKRKCSHHSSVSGFVKNNSNLGDDPIDIEDLVNIGRSQGPCPYYLSRELHKVVDILFAPYNYLIDRGNRKSLNIKWEDSVLIFDEAHNL 225
BLAST of mRNA_M-pyrifera_M_contig102307.490.1 vs. uniprot
Match: A0A067EJ33_CITSI (Uncharacterized protein n=2 Tax=Citrus TaxID=2706 RepID=A0A067EJ33_CITSI) HSP 1 Score: 135 bits (341), Expect = 1.240e-34 Identity = 67/126 (53.17%), Postives = 90/126 (71.43%), Query Frame = 1 Query: 1 PKMAVLGSRAQLCIHDDVSKIRGNAQHHACRKLVSK---QKCKFHKRVQDY-KSNSDFTDAVLDIEELAGLGKSKGVCPYYLTRELQDNAELVLIPYNYLIDPQTRQSLHVDLEGSVLIFDEAHNM 366 PKM +LGSR QLCIH +VS +RG+AQ++ACR L K ++C H RV DY K+N D +DIE+L +G++ G CPY++TRELQ ++V PYNYLIDP R+ L V+ + S+LIFDEAHN+ Sbjct: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGRTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246
BLAST of mRNA_M-pyrifera_M_contig102307.490.1 vs. uniprot
Match: UPI000D3045CB (regulator of telomere elongation helicase 1-like n=1 Tax=Maylandia zebra TaxID=106582 RepID=UPI000D3045CB) HSP 1 Score: 129 bits (323), Expect = 1.540e-34 Identity = 57/124 (45.97%), Postives = 91/124 (73.39%), Query Frame = 1 Query: 1 PKMAVLGSRAQLCIHDDVSKIRGN-AQHHACRKLVSKQKCKFHKRVQDYKSNSDFTDAVLDIEELAGLGKSKGVCPYYLTRELQDNAELVLIPYNYLIDPQTRQSLHVDLEGSVLIFDEAHNMV 369 PK+ V+GSR QLCI+ DV + N + H CR VS + C ++K++++ ++ DF ++LD+E+L G + VCPYYL+R L+ A+++ +PYNYL+DP++R++L +DL G+V+IFDEAHN+V Sbjct: 130 PKVCVMGSREQLCINQDVMCQKSNHVKVHMCRGKVSTRSCVYYKKLEEKSTDRDFVSSILDVEDLVQFGNKQRVCPYYLSRSLKQEADVIFMPYNYLLDPKSRKALSIDLNGAVVIFDEAHNVV 253
BLAST of mRNA_M-pyrifera_M_contig102307.490.1 vs. uniprot
Match: A0A7S0QM79_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QM79_9CRYP) HSP 1 Score: 130 bits (327), Expect = 1.640e-34 Identity = 61/122 (50.00%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 1 PKMAVLGSRAQLCIHDDVSKIRGNAQHHACRKLVSKQKCKFHKRVQDYKSNSDFTDAVLDIEELAGLGKSKGVCPYYLTRELQDNAELVLIPYNYLIDPQTRQSLHVDLEGSVLIFDEAHNM 366 P+++VLGSR QLC+H +VSK+RG AQ+ AC+KLV+ + C +H RV ++K D +LDIE+L G+ + VCPY+L+REL + AE++ +PYNYL D +R++L SV IFDEAHN+ Sbjct: 92 PRISVLGSRQQLCVHPEVSKLRGAAQNCACQKLVAAKACLYHSRVMEHKYERDIAGGLLDIEDLCKHGQQQKVCPYFLSRELANEAEVIFMPYNYLTDTASRRTLGTLWHNSVAIFDEAHNL 213
BLAST of mRNA_M-pyrifera_M_contig102307.490.1 vs. uniprot
Match: V4RZ01_CITCL (Uncharacterized protein n=11 Tax=Citrus TaxID=2706 RepID=V4RZ01_CITCL) HSP 1 Score: 135 bits (340), Expect = 1.890e-34 Identity = 67/126 (53.17%), Postives = 90/126 (71.43%), Query Frame = 1 Query: 1 PKMAVLGSRAQLCIHDDVSKIRGNAQHHACRKLVSK---QKCKFHKRVQDY-KSNSDFTDAVLDIEELAGLGKSKGVCPYYLTRELQDNAELVLIPYNYLIDPQTRQSLHVDLEGSVLIFDEAHNM 366 PKM +LGSR QLCIH +VS +RG+AQ++ACR L K ++C H RV DY K+N D +DIE+L +G++ G CPY++TRELQ ++V PYNYLIDP R+ L V+ + S+LIFDEAHN+ Sbjct: 121 PKMVILGSREQLCIHREVSLLRGSAQNNACRFLCKKGTNRRCNHHSRVADYMKNNPHLGDEPIDIEDLVNIGQTFGPCPYFMTRELQKTVDIVFAPYNYLIDPWFRKGLGVEWKNSILIFDEAHNL 246 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102307.490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102307.490.1 >prot_M-pyrifera_M_contig102307.490.1 ID=prot_M-pyrifera_M_contig102307.490.1|Name=mRNA_M-pyrifera_M_contig102307.490.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp MAVLGSRAQLCIHDDVSKIRGNAQHHACRKLVSKQKCKFHKRVQDYKSNSback to top mRNA from alignment at M-pyrifera_M_contig102307:131..615- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102307.490.1 ID=mRNA_M-pyrifera_M_contig102307.490.1|Name=mRNA_M-pyrifera_M_contig102307.490.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=485bp|location=Sequence derived from alignment at M-pyrifera_M_contig102307:131..615- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102307:131..615- >mRNA_M-pyrifera_M_contig102307.490.1 ID=mRNA_M-pyrifera_M_contig102307.490.1|Name=mRNA_M-pyrifera_M_contig102307.490.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig102307:131..615- (Macrocystis pyrifera P11B4 male)back to top |