mRNA_M-pyrifera_M_contig102306.489.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102306.489.1 vs. uniprot
Match: A0A6P6FUG1_ZIZJJ (protein DEK-like n=4 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P6FUG1_ZIZJJ) HSP 1 Score: 62.0 bits (149), Expect = 9.510e-9 Identity = 40/122 (32.79%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 1 SVTRGGRVRKQVNKF-AGGVPTSKAE--WSVVAGKGSELSTLPNVVVRVKLESPASRPVQLLHSLLYSRRAKKLSVKPNILSFSGFPWVGSDEEEAEMDKVQAKANGWKLAEMKTVMDMLEV 357 ++ R R RK V ++ A P S A S+ G+G++L +PNV ++ P +QLLH++L+ ++AK S+K NI FSG+ WV +E+E + KV+ K + ++ D+L + Sbjct: 129 AIERPARERKLVERYSAPSTPRSSASKALSIEKGRGTQLKDIPNVAFKLAKRKPDDN-LQLLHTILFGKKAKAHSLKRNIGQFSGYVWV-ENEQEKQRAKVKEKLDKCIKEKLMDFCDVLNI 248
BLAST of mRNA_M-pyrifera_M_contig102306.489.1 vs. uniprot
Match: A0A2R6QG85_ACTCC (Protein DEK like n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QG85_ACTCC) HSP 1 Score: 60.8 bits (146), Expect = 2.390e-8 Identity = 38/116 (32.76%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 19 RVRKQVNKFAG---GVPTSKAEWSVVAGKGSELSTLPNVVVRVKLESPASRPVQLLHSLLYSRRAKKLSVKPNILSFSGFPWVGSDEEEAEMDKVQAKANGWKLAEMKTVMDMLEV 357 R RK V +++ G SK +S+ G+G++L +PNV ++ P +Q+LH+LLY +RAK S+K NI FSG+ W+ + EE + K++ K + ++ D+L + Sbjct: 104 RERKTVERYSAPSTGRSASKG-FSIEKGRGAQLKDIPNVAFKLSKRKPDDN-LQILHTLLYGKRAKPHSLKRNIGQFSGYVWI--ENEEKQRAKMREKIDKCVKEKLLDYCDILNI 215
BLAST of mRNA_M-pyrifera_M_contig102306.489.1 vs. uniprot
Match: A0A0K9R0E8_SPIOL (DEK C-terminal domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9R0E8_SPIOL) HSP 1 Score: 60.8 bits (146), Expect = 2.400e-8 Identity = 38/122 (31.15%), Postives = 64/122 (52.46%), Query Frame = 1 Query: 4 VTRGGRVRKQVNKFAGGVPTSKAEW----SVVAGKGSELSTLPNVVVRVKLESPASRPVQLLHSLLYSRRAKKLSVKPNILSFSGFPWVGSDEEEAEMDKVQAKANGWKLAEMKTVMDMLEV 357 V R R RK V +++ P S++ S+ G G+ L +PNV ++ P +QLLH++LY ++AK ++K +I FSGF W D EE + K++ K + ++ D+L + Sbjct: 136 VERPTRERKAVERYSIASPASRSSGGKSLSIAKGSGTVLKEIPNVAYKLSKRKPDDN-LQLLHTILYGKKAKVHNLKKDIDQFSGFVWT--DNEEKQRGKIKEKLDKCVKEKLMDFCDVLNI 254
BLAST of mRNA_M-pyrifera_M_contig102306.489.1 vs. uniprot
Match: A0A498I4N1_MALDO (DEK C-terminal domain-containing protein n=11 Tax=Maleae TaxID=721813 RepID=A0A498I4N1_MALDO) HSP 1 Score: 60.8 bits (146), Expect = 2.410e-8 Identity = 38/123 (30.89%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 4 VTRGGRVRKQVNKFAG---GVPTSKAEWSVVAGKGSELSTLPNVVVRVKLESPASRPVQLLHSLLYSRRAKKLSVKPNILSFSGFPWVGSDEEEAEMDKVQAKANGWKLAEMKTVMDMLEVCV 363 + R R RK V +++ G + S+ G+G+EL +PNV ++ + A +QLLH++L+ ++AK S+K NI FSG+ WV +E+E + +V+ K + ++ D+L + V Sbjct: 132 IERPTRERKLVERYSAPDSGRSSGTKALSIEKGRGTELKNIPNVAFKMS-KRKADDNLQLLHTILFGKKAKAHSLKKNISQFSGYVWV-ENEQEKQRARVKEKIDKCVKEKLMDFCDLLNIPV 252
BLAST of mRNA_M-pyrifera_M_contig102306.489.1 vs. uniprot
Match: A0A2R6PDG5_ACTCC (Protein DEK like n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6PDG5_ACTCC) HSP 1 Score: 60.5 bits (145), Expect = 3.260e-8 Identity = 38/116 (32.76%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 19 RVRKQVNKFAG---GVPTSKAEWSVVAGKGSELSTLPNVVVRVKLESPASRPVQLLHSLLYSRRAKKLSVKPNILSFSGFPWVGSDEEEAEMDKVQAKANGWKLAEMKTVMDMLEV 357 R RK V +++ G SK +S+ G+G++L +PNV ++ P +Q+LH+LLY +RAK S+K NI FSG+ W+ + EE + K++ K + ++ D+L + Sbjct: 103 RERKTVERYSAPSTGRSASKG-FSIEKGQGTQLKDIPNVAFKLSKRKPDDN-LQILHTLLYGKRAKPHSLKRNIGQFSGYVWI--ENEEKQRAKMREKLDKCVKEKLLDFCDVLNI 214
BLAST of mRNA_M-pyrifera_M_contig102306.489.1 vs. uniprot
Match: A0A540NCV1_MALBA (Uncharacterized protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NCV1_MALBA) HSP 1 Score: 60.1 bits (144), Expect = 4.360e-8 Identity = 37/118 (31.36%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 19 RVRKQVNKFAG---GVPTSKAEWSVVAGKGSELSTLPNVVVRVKLESPASRPVQLLHSLLYSRRAKKLSVKPNILSFSGFPWVGSDEEEAEMDKVQAKANGWKLAEMKTVMDMLEVCV 363 R RK V +++ G + +S+ G G+EL +PNV ++ + A +QLLH++L+ ++AK S+K NI FSG+ WV +E+E +V+ K + ++ D+L + V Sbjct: 135 RERKLVERYSAPESGRSSGTKSFSIEKGHGTELKNIPNVAFKMS-KRKADDNLQLLHTILFGKKAKPHSLKKNISQFSGYVWV-ENEQEKHRARVKEKIDKCVKEKLMDFCDLLNIPV 250
BLAST of mRNA_M-pyrifera_M_contig102306.489.1 vs. uniprot
Match: A0A1Q3CNE4_CEPFO (DEK_C domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CNE4_CEPFO) HSP 1 Score: 60.1 bits (144), Expect = 4.480e-8 Identity = 40/116 (34.48%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 19 RVRKQVNKF-AGGVPTSKAE--WSVVAGKGSELSTLPNVVVRVKLESPASRPVQLLHSLLYSRRAKKLSVKPNILSFSGFPWVGSDEEEAEMDKVQAKANGWKLAEMKTVMDMLEV 357 R RK V ++ A V S A S+ G+G++L +PNV ++ P +Q+LH++L+ ++AK S+K NI FSGF WV +E+E + KV+ K + ++ D+L V Sbjct: 122 RERKVVERYSAPSVARSSATKPLSIEKGRGTQLKDIPNVAFKLSKRKPNDN-LQILHTILFGKKAKAHSLKRNIGQFSGFVWV-ENEQEKQKAKVREKLDKCVKEKLMEFCDVLNV 235
BLAST of mRNA_M-pyrifera_M_contig102306.489.1 vs. uniprot
Match: A0A7J7CA49_TRIWF (ABC transporter F family member 4 isoform X1 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CA49_TRIWF) HSP 1 Score: 59.7 bits (143), Expect = 6.080e-8 Identity = 36/116 (31.03%), Postives = 64/116 (55.17%), Query Frame = 1 Query: 19 RVRKQVNKFAG---GVPTSKAEWSVVAGKGSELSTLPNVVVRVKLESPASRPVQLLHSLLYSRRAKKLSVKPNILSFSGFPWVGSDEEEAEMDKVQAKANGWKLAEMKTVMDMLEV 357 R RK V +++ G +S S+ G+G++L +PNV ++ P +Q+LH++L+ ++AK +K NI FSG+ WV DE+E + KV+ K + ++ D+L + Sbjct: 130 RERKTVERYSAPSLGRSSSSKGLSIEKGRGTQLKDIPNVAFKLSKRKPDDN-LQILHAILFGKKAKAQVLKRNIGQFSGYVWV-VDEQEKQKAKVREKLDKCVKEKLLDFCDVLNI 243
BLAST of mRNA_M-pyrifera_M_contig102306.489.1 vs. uniprot
Match: A0A8K0GV82_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0GV82_9ROSA) HSP 1 Score: 59.7 bits (143), Expect = 6.130e-8 Identity = 36/122 (29.51%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 1 SVTRGGRVRKQVNKFAG---GVPTSKAEWSVVAGKGSELSTLPNVVVRVKLESPASRPVQLLHSLLYSRRAKKLSVKPNILSFSGFPWVGSDEEEAEMDKVQAKANGWKLAEMKTVMDMLEV 357 +V R R RK V +++ G ++ S+ G+G++L +PNV ++ P +QLLH++L+ ++AK +K NI FSG+ W+ +E+E + KV+ K + ++ D+L + Sbjct: 143 AVERPTRERKVVERYSATSTGRSSASKSLSIEKGRGTQLKDIPNVAFKLAKRKPDDN-LQLLHTVLFGKKAKAHGLKRNIGQFSGYVWI-ENEQEKQRTKVKEKLDKCVKEKLMDFCDVLNI 262
BLAST of mRNA_M-pyrifera_M_contig102306.489.1 vs. uniprot
Match: A0A200R412_9MAGN (DEK n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R412_9MAGN) HSP 1 Score: 59.3 bits (142), Expect = 8.300e-8 Identity = 36/123 (29.27%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 4 VTRGGRVRKQVNKFAGGVPTSKAE-----WSVVAGKGSELSTLPNVVVRVKLESPASRPVQLLHSLLYSRRAKKLSVKPNILSFSGFPWVGSDEEEAEMDKVQAKANGWKLAEMKTVMDMLEV 357 + R R RK V +++ P+S+ S+ G+G++L +PNV ++ P +Q+LH++L+ ++AK S+K NI FSGF WV + EE + +++ K + ++ D+L++ Sbjct: 112 IERPARERKTVERYS--APSSEKASTPKALSIEKGRGTQLKDIPNVAFKLSKRKPDEN-LQMLHTILFGKKAKVQSLKRNINQFSGFVWV--ENEEKQRVRIKEKLDKCVKEKLMDFCDILDI 229 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102306.489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102306.489.1 >prot_M-pyrifera_M_contig102306.489.1 ID=prot_M-pyrifera_M_contig102306.489.1|Name=mRNA_M-pyrifera_M_contig102306.489.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp SVTRGGRVRKQVNKFAGGVPTSKAEWSVVAGKGSELSTLPNVVVRVKLESback to top mRNA from alignment at M-pyrifera_M_contig102306:48..474+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102306.489.1 ID=mRNA_M-pyrifera_M_contig102306.489.1|Name=mRNA_M-pyrifera_M_contig102306.489.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=427bp|location=Sequence derived from alignment at M-pyrifera_M_contig102306:48..474+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102306:48..474+ >mRNA_M-pyrifera_M_contig102306.489.1 ID=mRNA_M-pyrifera_M_contig102306.489.1|Name=mRNA_M-pyrifera_M_contig102306.489.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig102306:48..474+ (Macrocystis pyrifera P11B4 male)back to top |