mRNA_M-pyrifera_M_contig102300.487.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig102300.487.1 vs. uniprot
Match: A0A3D5DCK3_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DCK3_9GAMM) HSP 1 Score: 403 bits (1035), Expect = 4.090e-139 Identity = 179/209 (85.65%), Postives = 195/209 (93.30%), Query Frame = 1 Query: 4 MQPGHILYEVQESWHPPAVTDRITRGPLNFVEVWKTAQKMTDKPVKFGSICATCLPMMLWNEYYPDDESMVMDIAAALNEEYRALSDAGCPIIQIEEPVHHFNCNMEPPCSDKDLEFYTAAFNRQVEGVDSEIWAHTCWGNPNQQSFYWDRPSYERPLPYFLEMNCDVLMLECGSNGARDIEMLGKYKTDKKSGIGVVDHTRTTVESPE 630 MQPGHILYEVQESW PP VTD+ITRG L+FVEVWKTAQKMTD+PVKFGSICATC+PMMLWNE+YP+D +M+MDIA ALNEEYR LSDAGCPIIQIEEPVHHFNCN EPPCSDKDL+FYT AFNRQV GV SE+WAHTCWGNPNQQSFYW+RPSYERPL YFLEMNCDVLM+ECGSN ARD+++L K+KTDKK GIGVVDHTRTTVESPE Sbjct: 107 MQPGHILYEVQESWTPPVVTDKITRGSLDFVEVWKTAQKMTDRPVKFGSICATCIPMMLWNEHYPNDHAMIMDIAIALNEEYRGLSDAGCPIIQIEEPVHHFNCNTEPPCSDKDLQFYTEAFNRQVAGVQSEVWAHTCWGNPNQQSFYWERPSYERPLEYFLEMNCDVLMMECGSNQARDVKLLAKHKTDKKIGIGVVDHTRTTVESPE 315
BLAST of mRNA_M-pyrifera_M_contig102300.487.1 vs. uniprot
Match: A0A7Y3M953_9DELT (Cobalamin-independent methionine synthase II family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3M953_9DELT) HSP 1 Score: 324 bits (831), Expect = 4.100e-108 Identity = 146/210 (69.52%), Postives = 170/210 (80.95%), Query Frame = 1 Query: 1 DMQPGHILYEVQESWHPPAVTDRITRGPLNFVEVWKTAQKMTDKPVKFGSICATCLPMMLWNEYYPDDESMVMDIAAALNEEYRALSDAGCPIIQIEEPVHHFNCNMEPPCSDKDLEFYTAAFNRQVEGVDSEIWAHTCWGNPNQQSFYWDRPSYERPLPYFLEMNCDVLMLECGSNGARDIEMLGKYKTDKKSGIGVVDHTRTTVESPE 630 DM PG ILYEVQE++HPPAVT I+RGPL+F WKTAQ+MT +PVKFGSI A+CLPMMLWNE+Y D +++ +A ALNEE R L+DAGCP+IQ+EEP HHF C PP +DKDLEFYT AFNR+V GV++EIWAHTCWGNPNQQSFYW+RPSYER LPY L ++ DVLMLE SN RD+ +L Y TDKK IGVVDHTRTTVE PE Sbjct: 106 DMAPGDILYEVQEAYHPPAVTGPISRGPLHFAAAWKTAQRMTPRPVKFGSISASCLPMMLWNEHYASDRDLILALADALNEELRELADAGCPVIQVEEPPHHFACAATPPATDKDLEFYTEAFNREVAGVNTEIWAHTCWGNPNQQSFYWERPSYERSLPYLLALDADVLMLEGASNHGRDLALLKHYPTDKKISIGVVDHTRTTVERPE 315
BLAST of mRNA_M-pyrifera_M_contig102300.487.1 vs. uniprot
Match: A0A7J9WE22_9ACTN (Meth_synt_2 domain-containing protein n=1 Tax=Nitriliruptorales bacterium TaxID=2497630 RepID=A0A7J9WE22_9ACTN) HSP 1 Score: 303 bits (775), Expect = 4.920e-101 Identity = 129/208 (62.02%), Postives = 163/208 (78.37%), Query Frame = 1 Query: 4 MQPGHILYEVQESWHPPAVTDRITRGPLNFVEVWKTAQKMTDKPVKFGSICATCLPMMLWNEYYPDDESMVMDIAAALNEEYRALSDAGCPIIQIEEPVHHFNCNMEPPCSDKDLEFYTAAFNRQVEGVDSEIWAHTCWGNPNQQSFYWDRPSYERPLPYFLEMNCDVLMLECGSNGARDIEMLGKYKTDKKSGIGVVDHTRTTVESP 627 ++PGHILYEVQE++ PP+V +++RGPL+F +WK AQ+ KPVKFG+I A CLPMMLWNE+Y D + +D+AA +NEE R L+ AGCP+IQIEEP HF C P ++KDLEF T FNR+V+GV++EIWAHTCWGNPNQQSFYWD+PSYE+ LPY L++N DVL EC S+ +D+ + GKY+TDKK IGVV HT TTVESP Sbjct: 6 LRPGHILYEVQEAYQPPSVVQQLSRGPLHFTPIWKVAQRQASKPVKFGTISAACLPMMLWNEHYSSDRDLTLDVAAVMNEELRELAAAGCPVIQIEEPPQHFACYATQPATEKDLEFLTDVFNREVDGVETEIWAHTCWGNPNQQSFYWDKPSYEKALPYLLQLNADVLTFECASSNGQDLPLFGKYETDKKIAIGVVTHTVTTVESP 213
BLAST of mRNA_M-pyrifera_M_contig102300.487.1 vs. uniprot
Match: A0A7J9W2S9_9PSEU (Meth_synt_2 domain-containing protein n=1 Tax=Pseudonocardiaceae bacterium TaxID=1873463 RepID=A0A7J9W2S9_9PSEU) HSP 1 Score: 296 bits (759), Expect = 3.520e-97 Identity = 125/209 (59.81%), Postives = 163/209 (77.99%), Query Frame = 1 Query: 4 MQPGHILYEVQESWHPPAVTDRITRGPLNFVEVWKTAQKMTDKPVKFGSICATCLPMMLWNEYYPDDESMVMDIAAALNEEYRALSDAGCPIIQIEEPVHHFNCNMEPPCSDKDLEFYTAAFNRQVEGVDSEIWAHTCWGNPNQQSFYWDRPSYERPLPYFLEMNCDVLMLECGSNGARDIEMLGKYKTDKKSGIGVVDHTRTTVESPE 630 ++PGHIL+EVQE++ P+V +++RGPL+F +WK AQ+ KPVK G+I + CLPMMLWNE+YP D + +D+AA +NEE + L+ AGCP+IQIEEP HF C P ++KDLEF T FNR+V+GV++EIWAHTCWGNPNQQSFYWD+PSYE+ LPY L++N DVL EC S+ +D+ + GKY+TDKK IGVV HT TTVESP+ Sbjct: 108 LRPGHILHEVQEAYQAPSVVQQLSRGPLHFTPIWKVAQRQASKPVKLGTISSACLPMMLWNEHYPSDRELTLDVAAIMNEELKELAAAGCPVIQIEEPPQHFACYASQPATEKDLEFLTDVFNREVDGVETEIWAHTCWGNPNQQSFYWDKPSYEKALPYLLQLNADVLTFECASSDGQDLPLFGKYETDKKIAIGVVTHTVTTVESPD 316
BLAST of mRNA_M-pyrifera_M_contig102300.487.1 vs. uniprot
Match: A0A7V3ULM8_9BACT (Meth_synt_2 domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3ULM8_9BACT) HSP 1 Score: 290 bits (743), Expect = 1.080e-94 Identity = 125/208 (60.10%), Postives = 159/208 (76.44%), Query Frame = 1 Query: 7 QPGHILYEVQESWHPPAVTDRITRGPLNFVEVWKTAQKMTDKPVKFGSICATCLPMMLWNEYYPDDESMVMDIAAALNEEYRALSDAGCPIIQIEEPVHHFNCNMEPPCSDKDLEFYTAAFNRQVEGVDSEIWAHTCWGNPNQQSFYWDRPSYERPLPYFLEMNCDVLMLECGSNGARDIEMLGKYKTDKKSGIGVVDHTRTTVESPE 630 +PGHIL+EVQE++ PPAVT ++TRGPL + +WK AQ++T KPVKFG+I A CLP MLWN+YYP + +++ +A +NEE + L+ GCP+IQ+EEP HH +P +DKDLEF T FN+QVEGVD+EIWAHTCWGNPNQQS +W+RPSYER LP+ L +N DV+ EC S G +D+ + GKYKTDKK IGVV HT T VE PE Sbjct: 109 RPGHILWEVQEAYQPPAVTGKVTRGPLQYAALWKVAQRLTAKPVKFGTISADCLPSMLWNQYYPTRKDLILALAQVMNEELKELAAEGCPLIQLEEPPHHMAAQ-DPETTDKDLEFLTETFNKQVEGVDAEIWAHTCWGNPNQQSVFWERPSYERALPHLLRLNADVITFECASTGGKDLHLFGKYKTDKKIAIGVVSHTNTVVEPPE 315
BLAST of mRNA_M-pyrifera_M_contig102300.487.1 vs. uniprot
Match: A0A1Q7WQP8_9PROT (Meth_synt_2 domain-containing protein n=4 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7WQP8_9PROT) HSP 1 Score: 278 bits (710), Expect = 9.930e-90 Identity = 118/209 (56.46%), Postives = 161/209 (77.03%), Query Frame = 1 Query: 4 MQPGHILYEVQESWHPPAVTDRITRGPLNFVEVWKTAQKMTDKPVKFGSICATCLPMMLWNEYYPDDESMVMDIAAALNEEYRALSDAGCPIIQIEEPVHHFNCNMEPPCSDKDLEFYTAAFNRQVEGVDSEIWAHTCWGNPNQQSFYWDRPSYERPLPYFLEMNCDVLMLECGSNGARDIEMLGKYKTDKKSGIGVVDHTRTTVESPE 630 ++PG IL+EVQE++ P VTD+++RGPL + +W+ AQ+++DKPVKFG+ICA L MLW+E+Y DD+++V+D+ +N E+R L+ AGCP+IQ+EEP HH + P C+DKDLEF T AFNRQ++GV++E+W HTCWGNPNQQ YW+ PSYER LP+ L++ CDV+ EC S+ RD+ + GKYKTDKK GIGVV+H T VE E Sbjct: 108 LKPGKILWEVQEAYQPGVVTDKLSRGPLEYTAIWQIAQRLSDKPVKFGAICAPALVSMLWDEHYHDDKALVLDLCDIMNAEFRELAAAGCPVIQVEEPRHHGLTTL-PDCNDKDLEFQTEAFNRQLDGVEAEVWVHTCWGNPNQQRVYWEVPSYERALPHLLQLKCDVITFECASSDGRDLPLFGKYKTDKKIGIGVVNHCNTVVEPAE 315
BLAST of mRNA_M-pyrifera_M_contig102300.487.1 vs. uniprot
Match: A0A7V3F739_9BACT (Meth_synt_2 domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V3F739_9BACT) HSP 1 Score: 277 bits (708), Expect = 1.710e-89 Identity = 121/210 (57.62%), Postives = 152/210 (72.38%), Query Frame = 1 Query: 1 DMQPGHILYEVQESWHPPAVTDRITRGPLNFVEVWKTAQKMTDKPVKFGSICATCLPMMLWNEYYPDDESMVMDIAAALNEEYRALSDAGCPIIQIEEPVHHFNCNMEPPCSDKDLEFYTAAFNRQVEGVDSEIWAHTCWGNPNQQSFYWDRPSYERPLPYFLEMNCDVLMLECGSNGARDIEMLGKYKTDKKSGIGVVDHTRTTVESPE 630 +++PGHIL+EVQE++ P V +R++RGPL F +WK AQ++TD+PVKFG+ICA L MLWNEYY DD ++ D+ N E R L+ AGCP+IQ+EEP HH P C+D +LEF T AFNRQ+ GVD+EIW HTCWGNPNQQ YW+ PSYER LPY L++N DV+ EC S RD+ + KY TDKK GIGVV+H T VE PE Sbjct: 107 NLRPGHILWEVQEAYQPAVVQERLSRGPLEFTALWKVAQRLTDRPVKFGTICAPALASMLWNEYYRDDRELIYDLCDIFNAELRELAAAGCPLIQVEEPPHHGRTT-RPDCTDAELEFLTEAFNRQLVGVDAEIWVHTCWGNPNQQRVYWEVPSYERALPYLLQLNADVITFECTSTNGRDLPLFAKYPTDKKIGIGVVNHCNTVVEPPE 315
BLAST of mRNA_M-pyrifera_M_contig102300.487.1 vs. uniprot
Match: UPI00131C299C (cobalamin-independent methionine synthase II family protein n=1 Tax=Acidisphaera sp. S103 TaxID=1747223 RepID=UPI00131C299C) HSP 1 Score: 276 bits (707), Expect = 2.280e-89 Identity = 118/210 (56.19%), Postives = 159/210 (75.71%), Query Frame = 1 Query: 1 DMQPGHILYEVQESWHPPAVTDRITRGPLNFVEVWKTAQKMTDKPVKFGSICATCLPMMLWNEYYPDDESMVMDIAAALNEEYRALSDAGCPIIQIEEPVHHFNCNMEPPCSDKDLEFYTAAFNRQVEGVDSEIWAHTCWGNPNQQSFYWDRPSYERPLPYFLEMNCDVLMLECGSNGARDIEMLGKYKTDKKSGIGVVDHTRTTVESPE 630 D++PG IL+EVQE++ P V+ ++TRGP + +W+ AQ++TD+PVKFG+ICA L MLWNE+Y DD++M++D+ +N E R L+ AGCP+IQ+EEP HH ++ P C+D DLEF T AFNRQ+ GVD+EIWAHTCWGNPNQQ YW+ PSYER +P+ L++N DV+ EC S+ +D+ + GKY TDKK GIGVV+H T VE PE Sbjct: 107 DLRPGKILWEVQEAYQPSIVSGKLTRGPWEYTALWQVAQRLTDRPVKFGAICAPALASMLWNEFYVDDKAMILDLCDIMNAELRELAAAGCPLIQVEEPPHHGR-SLRPDCTDADLEFLTEAFNRQLAGVDAEIWAHTCWGNPNQQRVYWEVPSYERAMPHLLQLNADVITFECASSDGKDLHLFGKYGTDKKIGIGVVNHCNTVVEPPE 315
BLAST of mRNA_M-pyrifera_M_contig102300.487.1 vs. uniprot
Match: A0A537R6D5_9PROT (Cobalamin-independent methionine synthase II family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R6D5_9PROT) HSP 1 Score: 273 bits (699), Expect = 9.880e-89 Identity = 118/210 (56.19%), Postives = 155/210 (73.81%), Query Frame = 1 Query: 1 DMQPGHILYEVQESWHPPAVTDRITRGPLNFVEVWKTAQKMTDKPVKFGSICATCLPMMLWNEYYPDDESMVMDIAAALNEEYRALSDAGCPIIQIEEPVHHFNCNMEPPCSDKDLEFYTAAFNRQVEGVDSEIWAHTCWGNPNQQSFYWDRPSYERPLPYFLEMNCDVLMLECGSNGARDIEMLGKYKTDKKSGIGVVDHTRTTVESPE 630 D++PG IL+EVQE++ P V +++TRGPL + +W+ AQ+ +D+PVKFG+ICA L MLWNE+Y DD++MV+D+ +N E R L+ AGCP+IQ+EEP HH P C+D +LEF T AFNRQ+ GVD+EIW HTCWGNPNQQ YW+ PSYER LPY L++ CDV+ EC SN +D+ + K+KTDKK GIGVV+H T VE E Sbjct: 61 DIRPGKILWEVQEAYQPAIVKEKLTRGPLEYAALWQIAQRFSDRPVKFGAICAPALASMLWNEHYADDKAMVLDLCDIMNAELRELAAAGCPVIQVEEPRHH-GLTTRPDCTDAELEFQTEAFNRQLAGVDAEIWVHTCWGNPNQQRVYWEVPSYERALPYLLQLECDVITFECASNDGKDLPLFAKHKTDKKIGIGVVNHCNTVVEPAE 269
BLAST of mRNA_M-pyrifera_M_contig102300.487.1 vs. uniprot
Match: W4LM79_9BACT (Meth_synt_2 domain-containing protein n=1 Tax=Candidatus Entotheonella factor TaxID=1429438 RepID=W4LM79_9BACT) HSP 1 Score: 271 bits (694), Expect = 2.170e-87 Identity = 116/210 (55.24%), Postives = 153/210 (72.86%), Query Frame = 1 Query: 1 DMQPGHILYEVQESWHPPAVTDRITRGPLNFVEVWKTAQKMTDKPVKFGSICATCLPMMLWNEYYPDDESMVMDIAAALNEEYRALSDAGCPIIQIEEPVHHFNCNMEPPCSDKDLEFYTAAFNRQVEGVDSEIWAHTCWGNPNQQSFYWDRPSYERPLPYFLEMNCDVLMLECGSNGARDIEMLGKYKTDKKSGIGVVDHTRTTVESPE 630 D++PG IL+EVQE++ P V +R+TRGPL + +WK AQ+++D+PVKFG+ICA L MLWNEYYPDD++++ ++ +N E R L AGCP+IQ+EEP HH P C+D DLEF T AFNRQ+ G+ +EIW HTCWGNPNQQ YW+ PSYER LPY L+++ DV+ EC S+ +D+ + Y TDKK GIGVV+H T VE PE Sbjct: 107 DLRPGRILWEVQEAYQPGVVKERLTRGPLEYTALWKIAQRLSDRPVKFGTICAPALASMLWNEYYPDDQALINELCDIMNAELRELDAAGCPLIQVEEPPHHGRTT-RPDCTDADLEFLTEAFNRQLAGLTAEIWVHTCWGNPNQQRVYWEPPSYERALPYLLQLDADVITFECASSNGKDLPLFANYPTDKKIGIGVVNHCNTVVEPPE 315 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig102300.487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig102300.487.1 >prot_M-pyrifera_M_contig102300.487.1 ID=prot_M-pyrifera_M_contig102300.487.1|Name=mRNA_M-pyrifera_M_contig102300.487.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp MQPGHILYEVQESWHPPAVTDRITRGPLNFVEVWKTAQKMTDKPVKFGSIback to top mRNA from alignment at M-pyrifera_M_contig102300:4..633- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig102300.487.1 ID=mRNA_M-pyrifera_M_contig102300.487.1|Name=mRNA_M-pyrifera_M_contig102300.487.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig102300:4..633- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig102300:4..633- >mRNA_M-pyrifera_M_contig102300.487.1 ID=mRNA_M-pyrifera_M_contig102300.487.1|Name=mRNA_M-pyrifera_M_contig102300.487.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1254bp|location=Sequence derived from alignment at M-pyrifera_M_contig102300:4..633- (Macrocystis pyrifera P11B4 male)back to top |